RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ZFPM1Q8IX07 1006 aa14.74□□□□□ -0.05
CNOT4-208ENST00000465721 DPF3Q92784 378 aa14.74□□□□□ -0.05
CNOT4-208ENST00000465721 RNF208Q9H0X6 261 aa14.74□□□□□ -0.05
CNOT4-208ENST00000465721 GABRQQ9UN88 632 aa14.74□□□□□ -0.05
CNOT4-208ENST00000465721 SIPA1L1O43166 1804 aa14.73□□□□□ -0.05
CNOT4-208ENST00000465721 SALL1Q9NSC2 1324 aa14.73□□□□□ -0.05
CNOT4-208ENST00000465721 A0A0G2JLL6 359 aaPredicted RBP14.73□□□□□ -0.05
CNOT4-208ENST00000465721 CXCL11O14625 94 aa14.73□□□□□ -0.05
CNOT4-208ENST00000465721 FCGRTP55899 365 aa14.73□□□□□ -0.05
CNOT4-208ENST00000465721 UBXN2AP68543 259 aa14.73□□□□□ -0.05
CNOT4-208ENST00000465721 PRRT2Q7Z6L0 340 aaPredicted RBP14.73□□□□□ -0.05
CNOT4-208ENST00000465721 SLAIN1Q8ND83 568 aa14.73□□□□□ -0.05
CNOT4-208ENST00000465721 U2AF1L4Q8WU68 220 aaKnown RBP14.73□□□□□ -0.05
CNOT4-208ENST00000465721 HTATIP2Q9BUP3 242 aa14.73□□□□□ -0.05
CNOT4-208ENST00000465721 UNC93B1Q9H1C4 597 aa14.73□□□□□ -0.05
CNOT4-208ENST00000465721 DDX60LQ5H9U9 1706 aaKnown RBP14.72□□□□□ -0.05
CNOT4-208ENST00000465721 FOCADQ5VW36 1801 aa14.72□□□□□ -0.05
CNOT4-208ENST00000465721 PHF20L1A8MW92 1017 aa14.72□□□□□ -0.05
CNOT4-208ENST00000465721 ZBTB7BO15156 539 aaPredicted RBP14.72□□□□□ -0.05
CNOT4-208ENST00000465721 FARP2O94887 1054 aaPredicted RBP14.72□□□□□ -0.05
CNOT4-208ENST00000465721 ZEB1P37275 1124 aaPredicted RBP14.72□□□□□ -0.05
CNOT4-208ENST00000465721 USP40Q9NVE5 1235 aa14.72□□□□□ -0.05
CNOT4-208ENST00000465721 LAMA2P24043 3122 aaKnown RBP14.72□□□□□ -0.05
CNOT4-208ENST00000465721 GAKO14976 1311 aa14.71□□□□□ -0.05
CNOT4-208ENST00000465721 LDHBP07195 334 aaKnown RBP14.71□□□□□ -0.05
CNOT4-208ENST00000465721 RGS3P49796 1198 aa14.71□□□□□ -0.05
CNOT4-208ENST00000465721 ATP2B3Q16720 1220 aa14.71□□□□□ -0.05
CNOT4-208ENST00000465721 SH3BP5LQ7L8J4 393 aa14.71□□□□□ -0.05
CNOT4-208ENST00000465721 SCYL3Q8IZE3 742 aa14.71□□□□□ -0.05
CNOT4-208ENST00000465721 SSH1Q8WYL5 1049 aa14.71□□□□□ -0.05
CNOT4-208ENST00000465721 IDI2Q9BXS1 227 aa14.71□□□□□ -0.05
CNOT4-208ENST00000465721 BIN2Q9UBW5 565 aaPredicted RBP14.71□□□□□ -0.05
CNOT4-208ENST00000465721 DNAH12Q6ZR08 3092 aa14.71□□□□□ -0.06
CNOT4-208ENST00000465721 FRMPD3Q5JV73 1810 aa14.71□□□□□ -0.06
CNOT4-208ENST00000465721 MAST2Q6P0Q8 1798 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 ADCY3O60266 1144 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 CIAO1O76071 339 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 ELNP15502 786 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 PTPRAP18433 802 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 PHKA1P46020 1223 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 FLT3LGP49771 235 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 MAP3K10Q02779 954 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 SLC45A1Q9Y2W3 748 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 AFG3L2Q9Y4W6 797 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 ZHX2Q9Y6X8 837 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 UNC80Q8N2C7 3258 aa14.7□□□□□ -0.06
CNOT4-208ENST00000465721 MYO5AQ9Y4I1 1855 aaKnown RBP14.69□□□□□ -0.06
CNOT4-208ENST00000465721 SEMA3EO15041 775 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 ANP32CO43423 234 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 ENTPD3O75355 529 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 SGPL1O95470 568 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 INHAP05111 366 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 SLURP2P0DP57 97 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 IRF5Q13568 498 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 GADL1Q6ZQY3 521 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 FASTKD5Q7L8L6 764 aaKnown RBP14.69□□□□□ -0.06
CNOT4-208ENST00000465721 PXYLP1Q8TE99 480 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 SIL1Q9H173 461 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 PICK1Q9NRD5 415 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.69□□□□□ -0.06
CNOT4-208ENST00000465721 FBXO3Q9UK99 471 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 NR2E3Q9Y5X4 410 aa14.69□□□□□ -0.06
CNOT4-208ENST00000465721 FAM9BQ8IZU0 186 aa14.68□□□□□ -0.06
CNOT4-208ENST00000465721 DDX4Q9NQI0 724 aaKnown RBP14.68□□□□□ -0.06
CNOT4-208ENST00000465721 PAK6Q9NQU5 681 aaPredicted RBP14.68□□□□□ -0.06
CNOT4-208ENST00000465721 GNL3LQ9NVN8 582 aaKnown RBP14.68□□□□□ -0.06
CNOT4-208ENST00000465721 DENND2AQ9ULE3 1009 aa14.68□□□□□ -0.06
CNOT4-208ENST00000465721 A0A1W2PPC1 479 aa14.67□□□□□ -0.06
CNOT4-208ENST00000465721 DDTLA6NHG4 134 aaPredicted RBP14.67□□□□□ -0.06
CNOT4-208ENST00000465721 SOX1O00570 391 aaPredicted RBP14.67□□□□□ -0.06
CNOT4-208ENST00000465721 TNPO2O14787 897 aaKnown RBP14.67□□□□□ -0.06
CNOT4-208ENST00000465721 ADORA1P30542 326 aa14.67□□□□□ -0.06
CNOT4-208ENST00000465721 RASGRF1Q13972 1273 aa14.67□□□□□ -0.06
CNOT4-208ENST00000465721 CRISPLD2Q9H0B8 497 aa14.67□□□□□ -0.06
CNOT4-208ENST00000465721 COL2A1P02458 1487 aaPredicted RBP14.67□□□□□ -0.06
CNOT4-208ENST00000465721 PDS5AQ29RF7 1337 aaKnown RBP14.66□□□□□ -0.06
CNOT4-208ENST00000465721 CTNND1O60716 968 aaKnown RBP14.66□□□□□ -0.06
CNOT4-208ENST00000465721 CCDC84Q86UT8 332 aaPredicted RBP14.66□□□□□ -0.06
CNOT4-208ENST00000465721 SMCR8Q8TEV9 937 aaPredicted RBP14.66□□□□□ -0.06
CNOT4-208ENST00000465721 DEFB118Q96PH6 123 aa14.66□□□□□ -0.06
CNOT4-208ENST00000465721 CEP126Q9P2H0 1117 aa14.66□□□□□ -0.06
CNOT4-208ENST00000465721 AGTPBP1Q9UPW5 1226 aa14.66□□□□□ -0.06
CNOT4-208ENST00000465721 LRRFIP2Q9Y608 721 aaKnown RBP14.66□□□□□ -0.06
CNOT4-208ENST00000465721 TRIM75PA6NK02 468 aa14.65□□□□□ -0.06
CNOT4-208ENST00000465721 EVI5O60447 810 aa14.65□□□□□ -0.06
CNOT4-208ENST00000465721 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
CNOT4-208ENST00000465721 IL15P40933 162 aaPredicted RBP14.65□□□□□ -0.06
CNOT4-208ENST00000465721 BTDP43251 543 aa14.65□□□□□ -0.06
CNOT4-208ENST00000465721 FAM110CQ1W6H9 321 aa14.65□□□□□ -0.06
CNOT4-208ENST00000465721 TREML2Q5T2D2 321 aa14.65□□□□□ -0.06
CNOT4-208ENST00000465721 CCDC102BQ68D86 513 aa14.65□□□□□ -0.06
CNOT4-208ENST00000465721 DZIP1Q86YF9 867 aaKnown RBP14.65□□□□□ -0.06
CNOT4-208ENST00000465721 ZSCAN29Q8IWY8 852 aaPredicted RBP14.65□□□□□ -0.06
CNOT4-208ENST00000465721 ZGPATQ8N5A5 531 aaKnown RBP14.65□□□□□ -0.06
CNOT4-208ENST00000465721 ZNF384Q8TF68 577 aa14.65□□□□□ -0.06
CNOT4-208ENST00000465721 FAM163AQ96GL9 167 aaPredicted RBP14.65□□□□□ -0.06
CNOT4-208ENST00000465721 PA2G4Q9UQ80 394 aaKnown RBP14.65□□□□□ -0.06
CNOT4-208ENST00000465721 MROH7-TTC4A0A0A0MT08 1334 aa14.65□□□□□ -0.06
CNOT4-208ENST00000465721 E9PSI1 815 aa14.64□□□□□ -0.07
CNOT4-208ENST00000465721 CAPN2P17655 700 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms