RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PDE4AP27815 886 aa24.59■■□□□ 1.53
SKA3-205ENST00000465471 SLFNL1Q499Z3 407 aa24.59■■□□□ 1.53
SKA3-205ENST00000465471 ZSCAN25Q6NSZ9 544 aa24.59■■□□□ 1.53
SKA3-205ENST00000465471 ARMC9Q7Z3E5 817 aa24.59■■□□□ 1.53
SKA3-205ENST00000465471 PPP1R12BO60237 982 aaPredicted RBP24.58■■□□□ 1.53
SKA3-205ENST00000465471 USP2O75604 605 aaPredicted RBP24.58■■□□□ 1.53
SKA3-205ENST00000465471 VEGFBP49765 207 aa24.58■■□□□ 1.53
SKA3-205ENST00000465471 PICALMQ13492 652 aa24.58■■□□□ 1.53
SKA3-205ENST00000465471 HOOK2Q96ED9 719 aa24.58■■□□□ 1.53
SKA3-205ENST00000465471 OSBPL5Q9H0X9 879 aaPredicted RBP24.58■■□□□ 1.53
SKA3-205ENST00000465471 ANGEL1Q9UNK9 670 aaKnown RBP24.58■■□□□ 1.53
SKA3-205ENST00000465471 AK9Q5TCS8 1911 aa24.58■■□□□ 1.53
SKA3-205ENST00000465471 SIPA1L1O43166 1804 aa24.58■■□□□ 1.53
SKA3-205ENST00000465471 FLT1P17948 1338 aa24.58■■□□□ 1.52
SKA3-205ENST00000465471 MAGEB6P1A0A0J9YX57 407 aa24.57■■□□□ 1.52
SKA3-205ENST00000465471 DDTLA6NHG4 134 aaPredicted RBP24.57■■□□□ 1.52
SKA3-205ENST00000465471 UNCXA6NJT0 531 aa24.57■■□□□ 1.52
SKA3-205ENST00000465471 UBE2Q2LH0YL09 131 aa24.57■■□□□ 1.52
SKA3-205ENST00000465471 PRKG1Q13976 671 aa24.57■■□□□ 1.52
SKA3-205ENST00000465471 TTLL12Q14166 644 aaPredicted RBP24.57■■□□□ 1.52
SKA3-205ENST00000465471 RGMBQ6NW40 437 aa24.57■■□□□ 1.52
SKA3-205ENST00000465471 CYP4F22Q6NT55 531 aa24.56■■□□□ 1.52
SKA3-205ENST00000465471 JMYQ8N9B5 988 aa24.56■■□□□ 1.52
SKA3-205ENST00000465471 CAPNS2Q96L46 248 aa24.56■■□□□ 1.52
SKA3-205ENST00000465471 ZFYP08048 801 aaPredicted RBP24.55■■□□□ 1.52
SKA3-205ENST00000465471 ECE1P42892 770 aa24.55■■□□□ 1.52
SKA3-205ENST00000465471 IREB2P48200 963 aaKnown RBP24.55■■□□□ 1.52
SKA3-205ENST00000465471 MAP3K10Q02779 954 aa24.55■■□□□ 1.52
SKA3-205ENST00000465471 CENPQQ7L2Z9 268 aaPredicted RBP24.55■■□□□ 1.52
SKA3-205ENST00000465471 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.55■■□□□ 1.52
SKA3-205ENST00000465471 TGFBRAP1Q8WUH2 860 aa24.55■■□□□ 1.52
SKA3-205ENST00000465471 CSRNP1Q96S65 589 aa24.55■■□□□ 1.52
SKA3-205ENST00000465471 NAV1Q8NEY1 1877 aa24.55■■□□□ 1.52
SKA3-205ENST00000465471 WDR33Q9C0J8 1336 aaKnown RBP24.55■■□□□ 1.52
SKA3-205ENST00000465471 LAMB1P07942 1786 aa24.54■■□□□ 1.52
SKA3-205ENST00000465471 FAM155AB1AL88 458 aaPredicted RBP24.54■■□□□ 1.52
SKA3-205ENST00000465471 RNF113AO15541 343 aaKnown RBP24.54■■□□□ 1.52
SKA3-205ENST00000465471 SLC10A3P09131 477 aa24.54■■□□□ 1.52
SKA3-205ENST00000465471 DCAF15Q66K64 600 aa24.54■■□□□ 1.52
SKA3-205ENST00000465471 LCORLQ8N3X6 602 aa24.54■■□□□ 1.52
SKA3-205ENST00000465471 EVI5LQ96CN4 794 aa24.54■■□□□ 1.52
SKA3-205ENST00000465471 MYH1P12882 1939 aa24.54■■□□□ 1.52
SKA3-205ENST00000465471 RASAL3Q86YV0 1011 aa24.53■■□□□ 1.52
SKA3-205ENST00000465471 MAPKAPK5Q8IW41 473 aa24.53■■□□□ 1.52
SKA3-205ENST00000465471 APPBP2Q92624 585 aa24.53■■□□□ 1.52
SKA3-205ENST00000465471 FSD1Q9BTV5 496 aa24.53■■□□□ 1.52
SKA3-205ENST00000465471 PUS7LQ9H0K6 701 aaKnown RBP24.53■■□□□ 1.52
SKA3-205ENST00000465471 PCNTO95613 3336 aa24.53■■□□□ 1.52
SKA3-205ENST00000465471 MBD4O95243 580 aa24.52■■□□□ 1.52
SKA3-205ENST00000465471 ZNF157P51786 506 aaPredicted RBP24.52■■□□□ 1.52
SKA3-205ENST00000465471 LRRFIP1Q32MZ4 808 aaKnown RBP24.52■■□□□ 1.52
SKA3-205ENST00000465471 ERICH6BQ5W0A0 696 aa24.52■■□□□ 1.52
SKA3-205ENST00000465471 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.52■■□□□ 1.52
SKA3-205ENST00000465471 TICAM2Q86XR7 235 aa24.52■■□□□ 1.52
SKA3-205ENST00000465471 ANKRD13AQ8IZ07 590 aa24.52■■□□□ 1.52
SKA3-205ENST00000465471 CCDC102AQ96A19 550 aa24.52■■□□□ 1.52
SKA3-205ENST00000465471 ZNF341Q9BYN7 854 aa24.52■■□□□ 1.52
SKA3-205ENST00000465471 DHX36Q9H2U1 1008 aaKnown RBP24.52■■□□□ 1.52
SKA3-205ENST00000465471 ARMT1Q9H993 441 aa24.52■■□□□ 1.52
SKA3-205ENST00000465471 ZNF112Q9UJU3 913 aa24.52■■□□□ 1.52
SKA3-205ENST00000465471 PAXIP1Q6ZW49 1069 aaPredicted RBP24.51■■□□□ 1.51
SKA3-205ENST00000465471 MIGA2Q7L4E1 593 aa24.51■■□□□ 1.51
SKA3-205ENST00000465471 ZSCAN29Q8IWY8 852 aaPredicted RBP24.51■■□□□ 1.51
SKA3-205ENST00000465471 OSBP2Q969R2 916 aa24.51■■□□□ 1.51
SKA3-205ENST00000465471 CLMNQ96JQ2 1002 aa24.51■■□□□ 1.51
SKA3-205ENST00000465471 CRNKL1Q9BZJ0 848 aaKnown RBP24.51■■□□□ 1.51
SKA3-205ENST00000465471 TBC1D12O60347 775 aa24.5■■□□□ 1.51
SKA3-205ENST00000465471 METTL16Q86W50 562 aaKnown RBP24.5■■□□□ 1.51
SKA3-205ENST00000465471 USP5P45974 858 aa24.49■■□□□ 1.51
SKA3-205ENST00000465471 MAP3K9P80192 1104 aa24.49■■□□□ 1.51
SKA3-205ENST00000465471 NOGQ13253 232 aa24.49■■□□□ 1.51
SKA3-205ENST00000465471 ZMYM1Q5SVZ6 1142 aa24.49■■□□□ 1.51
SKA3-205ENST00000465471 AIDAQ96BJ3 306 aa24.49■■□□□ 1.51
SKA3-205ENST00000465471 WRNIP1Q96S55 665 aa24.49■■□□□ 1.51
SKA3-205ENST00000465471 PHF20L1A8MW92 1017 aa24.48■■□□□ 1.51
SKA3-205ENST00000465471 SLURP2P0DP57 97 aa24.48■■□□□ 1.51
SKA3-205ENST00000465471 VGLL4Q14135 290 aa24.48■■□□□ 1.51
SKA3-205ENST00000465471 CCDC136Q96JN2 1154 aa24.48■■□□□ 1.51
SKA3-205ENST00000465471 STRBPQ96SI9 672 aaKnown RBP24.48■■□□□ 1.51
SKA3-205ENST00000465471 DCP1AQ9NPI6 582 aaPredicted RBP24.48■■□□□ 1.51
SKA3-205ENST00000465471 PALD1Q9ULE6 856 aa24.48■■□□□ 1.51
SKA3-205ENST00000465471 AOC2O75106 756 aa24.47■■□□□ 1.51
SKA3-205ENST00000465471 MAP2K2P36507 400 aa24.47■■□□□ 1.51
SKA3-205ENST00000465471 SDR42E1Q8WUS8 393 aa24.47■■□□□ 1.51
SKA3-205ENST00000465471 PI4KBQ9UBF8 816 aa24.47■■□□□ 1.51
SKA3-205ENST00000465471 SNCAIPQ9Y6H5 919 aa24.47■■□□□ 1.51
SKA3-205ENST00000465471 BAZ2AQ9UIF9 1905 aaKnown RBP24.46■■□□□ 1.51
SKA3-205ENST00000465471 M0R2C6 588 aa24.46■■□□□ 1.51
SKA3-205ENST00000465471 PRKAB2O43741 272 aa24.46■■□□□ 1.51
SKA3-205ENST00000465471 GSPT1P15170 499 aaKnown RBP24.46■■□□□ 1.51
SKA3-205ENST00000465471 INPP5BP32019 993 aa24.46■■□□□ 1.51
SKA3-205ENST00000465471 GRM1Q13255 1194 aa24.46■■□□□ 1.51
SKA3-205ENST00000465471 NOL9Q5SY16 702 aaKnown RBP24.46■■□□□ 1.51
SKA3-205ENST00000465471 TTC22Q5TAA0 569 aa24.46■■□□□ 1.51
SKA3-205ENST00000465471 ZIC5Q96T25 663 aa24.46■■□□□ 1.51
SKA3-205ENST00000465471 ATP8A2Q9NTI2 1148 aa24.46■■□□□ 1.51
SKA3-205ENST00000465471 SAP30BPQ9UHR5 308 aaKnown RBP24.46■■□□□ 1.51
SKA3-205ENST00000465471 HERC5Q9UII4 1024 aaKnown RBP24.46■■□□□ 1.51
SKA3-205ENST00000465471 DOCK1Q14185 1865 aa24.46■■□□□ 1.51
SKA3-205ENST00000465471 TRIM6-TRIM34B2RNG4 842 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms