RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 GIMAP6Q6P9H5 292 aa20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 USP50Q70EL3 339 aaPredicted RBP20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 RRAGCQ9HB90 399 aa20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 TMOD2Q9NZR1 351 aa20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 FLT1P17948 1338 aa20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 WDR90Q96KV7 1748 aa20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 PICALMQ13492 652 aa20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 FKBP1CQ5VVH2 108 aa20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 NACAP1Q9BZK3 213 aa20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 VEZTQ9HBM0 779 aa20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 RBM8AQ9Y5S9 174 aaKnown RBP20.16■□□□□ 0.82
EXOSC3-203ENST00000465229 TCP10L2B9ZVM9 353 aa20.15■□□□□ 0.82
EXOSC3-203ENST00000465229 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
EXOSC3-203ENST00000465229 ZFPM1Q8IX07 1006 aa20.15■□□□□ 0.82
EXOSC3-203ENST00000465229 ZNF526Q8TF50 670 aaPredicted RBP20.15■□□□□ 0.82
EXOSC3-203ENST00000465229 TDO2P48775 406 aa20.14■□□□□ 0.81
EXOSC3-203ENST00000465229 TCP10Q12799 353 aa20.14■□□□□ 0.81
EXOSC3-203ENST00000465229 NBR1Q14596 966 aa20.14■□□□□ 0.81
EXOSC3-203ENST00000465229 ANGEL2Q5VTE6 544 aaKnown RBP20.14■□□□□ 0.81
EXOSC3-203ENST00000465229 NAPBQ9H115 298 aa20.14■□□□□ 0.81
EXOSC3-203ENST00000465229 U3KPZ7 1027 aaPredicted RBP20.14■□□□□ 0.81
EXOSC3-203ENST00000465229 USP17L12C9JPN9 530 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 USP17L21D6R901 530 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 ENTPD3O75355 529 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 RABEP1Q15276 862 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 CTR9Q6PD62 1173 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 PNMA8AQ86V59 439 aaPredicted RBP20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 OSBPL5Q9H0X9 879 aaPredicted RBP20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 NMRK2Q9NPI5 230 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 MCM9Q9NXL9 1143 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 SCN4AP35499 1836 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 NECTIN1Q15223 517 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 GGA3Q9NZ52 723 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 SAP30BPQ9UHR5 308 aaKnown RBP20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 CTNNA3Q9UI47 895 aa20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
EXOSC3-203ENST00000465229 CNTNAP1P78357 1384 aa20.12■□□□□ 0.81
EXOSC3-203ENST00000465229 ZMYM6O95789 1325 aa20.12■□□□□ 0.81
EXOSC3-203ENST00000465229 EAPPQ56P03 285 aaPredicted RBP20.12■□□□□ 0.81
EXOSC3-203ENST00000465229 FAM83AQ86UY5 434 aa20.12■□□□□ 0.81
EXOSC3-203ENST00000465229 ZC3H15Q8WU90 426 aaKnown RBP20.12■□□□□ 0.81
EXOSC3-203ENST00000465229 PGAP2Q9UHJ9 254 aa20.12■□□□□ 0.81
EXOSC3-203ENST00000465229 PALD1Q9ULE6 856 aa20.12■□□□□ 0.81
EXOSC3-203ENST00000465229 CYP2D7A0A087X1C5 515 aa20.11■□□□□ 0.81
EXOSC3-203ENST00000465229 SBK1Q52WX2 424 aa20.11■□□□□ 0.81
EXOSC3-203ENST00000465229 SH3BP5LQ7L8J4 393 aa20.11■□□□□ 0.81
EXOSC3-203ENST00000465229 FAM151AQ8WW52 585 aa20.11■□□□□ 0.81
EXOSC3-203ENST00000465229 SMIM22K7EJ46 135 aa20.1■□□□□ 0.81
EXOSC3-203ENST00000465229 CYP2D6P10635 497 aa20.1■□□□□ 0.81
EXOSC3-203ENST00000465229 EVX2Q03828 476 aa20.1■□□□□ 0.81
EXOSC3-203ENST00000465229 TNFAIP1Q13829 316 aa20.1■□□□□ 0.81
EXOSC3-203ENST00000465229 RASA3Q14644 834 aa20.1■□□□□ 0.81
EXOSC3-203ENST00000465229 SLC4A8Q2Y0W8 1093 aa20.1■□□□□ 0.81
EXOSC3-203ENST00000465229 C12orf60Q5U649 245 aa20.1■□□□□ 0.81
EXOSC3-203ENST00000465229 IL27Q8NEV9 243 aa20.1■□□□□ 0.81
EXOSC3-203ENST00000465229 PITPNM2Q9BZ72 1349 aa20.1■□□□□ 0.81
EXOSC3-203ENST00000465229 DDTLA6NHG4 134 aaPredicted RBP20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 MINDY4BA8MYZ0 360 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 POLR3DP05423 398 aaPredicted RBP20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 CYP21A2P08686 494 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 POTEIP0CG38 1075 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 POTEJP0CG39 1038 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 HSPA4P34932 840 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 PLCD1P51178 756 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 CREB3L3Q68CJ9 461 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 APOBEC3FQ8IUX4 373 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 TMEM39BQ9GZU3 492 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 DEFB129Q9H1M3 183 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 ARPP21Q9UBL0 812 aaPredicted RBP20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 CDK5RAP2Q96SN8 1893 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 SLC27A2O14975 620 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 TNNI2P48788 182 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 HAND2P61296 217 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 NFKBIBQ15653 356 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 IMMTQ16891 758 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 DCPSQ96C86 337 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 IL17RAQ96F46 866 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 DHX36Q9H2U1 1008 aaKnown RBP20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 TAF6LQ9Y6J9 622 aa20.09■□□□□ 0.81
EXOSC3-203ENST00000465229 ECM29Q5VYK3 1845 aa20.08■□□□□ 0.81
EXOSC3-203ENST00000465229 ZNF213O14771 459 aa20.08■□□□□ 0.8
EXOSC3-203ENST00000465229 PPARAQ07869 468 aa20.08■□□□□ 0.8
EXOSC3-203ENST00000465229 ZSCAN29Q8IWY8 852 aaPredicted RBP20.08■□□□□ 0.8
EXOSC3-203ENST00000465229 RASEFQ8IZ41 740 aa20.08■□□□□ 0.8
EXOSC3-203ENST00000465229 KCNB2Q92953 911 aa20.08■□□□□ 0.8
EXOSC3-203ENST00000465229 NBPF3Q9H094 633 aa20.08■□□□□ 0.8
EXOSC3-203ENST00000465229 ANAPC4Q9UJX5 808 aa20.08■□□□□ 0.8
EXOSC3-203ENST00000465229 BAZ2AQ9UIF9 1905 aaKnown RBP20.08■□□□□ 0.8
EXOSC3-203ENST00000465229 ATRNL1Q5VV63 1379 aa20.07■□□□□ 0.8
EXOSC3-203ENST00000465229 ANAPC15P60006 121 aa20.07■□□□□ 0.8
EXOSC3-203ENST00000465229 TTC6Q86TZ1 520 aa20.07■□□□□ 0.8
EXOSC3-203ENST00000465229 CDAN1Q8IWY9 1227 aa20.07■□□□□ 0.8
EXOSC3-203ENST00000465229 AMOTL1Q8IY63 956 aa20.07■□□□□ 0.8
EXOSC3-203ENST00000465229 K7ELQ4 463 aaPredicted RBP20.06■□□□□ 0.8
EXOSC3-203ENST00000465229 CTDSPL2Q05D32 466 aa20.06■□□□□ 0.8
EXOSC3-203ENST00000465229 RNF20Q5VTR2 975 aa20.06■□□□□ 0.8
EXOSC3-203ENST00000465229 TEPSINQ96N21 525 aa20.06■□□□□ 0.8
EXOSC3-203ENST00000465229 SLKQ9H2G2 1235 aaPredicted RBP20.06■□□□□ 0.8
EXOSC3-203ENST00000465229 CLEC11AQ9Y240 323 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms