RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 TNFRSF10AO00220 468 aa19.17■□□□□ 0.66
NCSTN-210ENST00000465223 COL6A1P12109 1028 aa19.17■□□□□ 0.66
NCSTN-210ENST00000465223 FBXO33Q7Z6M2 555 aa19.17■□□□□ 0.66
NCSTN-210ENST00000465223 TRIB2Q92519 343 aa19.17■□□□□ 0.66
NCSTN-210ENST00000465223 MRIQ9BWK5 157 aa19.17■□□□□ 0.66
NCSTN-210ENST00000465223 PUS3Q9BZE2 481 aaKnown RBP19.17■□□□□ 0.66
NCSTN-210ENST00000465223 GJD2Q9UKL4 321 aa19.17■□□□□ 0.66
NCSTN-210ENST00000465223 ADAMTS8Q9UP79 889 aa19.17■□□□□ 0.66
NCSTN-210ENST00000465223 AFG3L2Q9Y4W6 797 aa19.17■□□□□ 0.66
NCSTN-210ENST00000465223 FRAT2O75474 233 aaPredicted RBP19.16■□□□□ 0.66
NCSTN-210ENST00000465223 PTPRAP18433 802 aa19.16■□□□□ 0.66
NCSTN-210ENST00000465223 NFIAQ12857 509 aa19.16■□□□□ 0.66
NCSTN-210ENST00000465223 VPS37DQ86XT2 251 aa19.16■□□□□ 0.66
NCSTN-210ENST00000465223 LINS1Q8NG48 757 aa19.16■□□□□ 0.66
NCSTN-210ENST00000465223 DNAAF4Q8WXU2 420 aa19.16■□□□□ 0.66
NCSTN-210ENST00000465223 CHMP4AQ9BY43 222 aa19.16■□□□□ 0.66
NCSTN-210ENST00000465223 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
NCSTN-210ENST00000465223 FAM110CQ1W6H9 321 aa19.15■□□□□ 0.66
NCSTN-210ENST00000465223 HHIPL2Q6UWX4 724 aa19.15■□□□□ 0.66
NCSTN-210ENST00000465223 ZFPM1Q8IX07 1006 aa19.15■□□□□ 0.66
NCSTN-210ENST00000465223 SCYL3Q8IZE3 742 aa19.15■□□□□ 0.66
NCSTN-210ENST00000465223 FAM122AQ96E09 287 aa19.15■□□□□ 0.66
NCSTN-210ENST00000465223 TTYH1Q9H313 450 aaPredicted RBP19.15■□□□□ 0.66
NCSTN-210ENST00000465223 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.15■□□□□ 0.66
NCSTN-210ENST00000465223 TTC28Q96AY4 2481 aa19.14■□□□□ 0.66
NCSTN-210ENST00000465223 DOCK2Q92608 1830 aa19.14■□□□□ 0.65
NCSTN-210ENST00000465223 PHF20L1A8MW92 1017 aa19.14■□□□□ 0.65
NCSTN-210ENST00000465223 FOSL2P15408 326 aa19.14■□□□□ 0.65
NCSTN-210ENST00000465223 WDR43Q15061 677 aaKnown RBP eCLIP19.14■□□□□ 0.65
NCSTN-210ENST00000465223 TREML2Q5T2D2 321 aa19.14■□□□□ 0.65
NCSTN-210ENST00000465223 CCDC84Q86UT8 332 aaPredicted RBP19.14■□□□□ 0.65
NCSTN-210ENST00000465223 LBHD1Q9BQE6 289 aaPredicted RBP19.14■□□□□ 0.65
NCSTN-210ENST00000465223 PICK1Q9NRD5 415 aa19.14■□□□□ 0.65
NCSTN-210ENST00000465223 FAM198AQ9UFP1 575 aa19.14■□□□□ 0.65
NCSTN-210ENST00000465223 LAMA2P24043 3122 aaKnown RBP19.14■□□□□ 0.65
NCSTN-210ENST00000465223 MAST2Q6P0Q8 1798 aa19.14■□□□□ 0.65
NCSTN-210ENST00000465223 TMEM265A0A087WTH1 108 aa19.13■□□□□ 0.65
NCSTN-210ENST00000465223 TRIM75PA6NK02 468 aa19.13■□□□□ 0.65
NCSTN-210ENST00000465223 SLURP2P0DP57 97 aa19.13■□□□□ 0.65
NCSTN-210ENST00000465223 PRKAR2AP13861 404 aaKnown RBP19.13■□□□□ 0.65
NCSTN-210ENST00000465223 FLIIQ13045 1269 aa19.13■□□□□ 0.65
NCSTN-210ENST00000465223 MAP3K21Q5TCX8 1036 aa19.13■□□□□ 0.65
NCSTN-210ENST00000465223 CDC42EP5Q6NZY7 148 aa19.13■□□□□ 0.65
NCSTN-210ENST00000465223 AGTPBP1Q9UPW5 1226 aa19.13■□□□□ 0.65
NCSTN-210ENST00000465223 MAST3O60307 1309 aa19.13■□□□□ 0.65
NCSTN-210ENST00000465223 DOCK1Q14185 1865 aa19.13■□□□□ 0.65
NCSTN-210ENST00000465223 LTBP2Q14767 1821 aa19.12■□□□□ 0.65
NCSTN-210ENST00000465223 CYP2B6P20813 491 aa19.12■□□□□ 0.65
NCSTN-210ENST00000465223 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
NCSTN-210ENST00000465223 FKBP5Q13451 457 aaPredicted RBP19.12■□□□□ 0.65
NCSTN-210ENST00000465223 TJAP1Q5JTD0 557 aa19.12■□□□□ 0.65
NCSTN-210ENST00000465223 ATRNL1Q5VV63 1379 aa19.11■□□□□ 0.65
NCSTN-210ENST00000465223 SHHQ15465 462 aa19.11■□□□□ 0.65
NCSTN-210ENST00000465223 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
NCSTN-210ENST00000465223 DAGLAQ9Y4D2 1042 aa19.11■□□□□ 0.65
NCSTN-210ENST00000465223 FRMPD3Q5JV73 1810 aa19.1■□□□□ 0.65
NCSTN-210ENST00000465223 APAF1O14727 1248 aa19.1■□□□□ 0.65
NCSTN-210ENST00000465223 RALBP1Q15311 655 aa19.1■□□□□ 0.65
NCSTN-210ENST00000465223 C9orf50Q5SZB4 431 aa19.1■□□□□ 0.65
NCSTN-210ENST00000465223 USP38Q8NB14 1042 aa19.1■□□□□ 0.65
NCSTN-210ENST00000465223 CCND3P30281 292 aaPredicted RBP19.09■□□□□ 0.65
NCSTN-210ENST00000465223 DIXDC1Q155Q3 683 aa19.09■□□□□ 0.65
NCSTN-210ENST00000465223 CAVIN4Q5BKX8 364 aa19.09■□□□□ 0.65
NCSTN-210ENST00000465223 LHX8Q68G74 356 aa19.09■□□□□ 0.65
NCSTN-210ENST00000465223 PNMA3Q9UL41 463 aa19.09■□□□□ 0.65
NCSTN-210ENST00000465223 SUGT1Q9Y2Z0 365 aa19.09■□□□□ 0.65
NCSTN-210ENST00000465223 MYH13Q9UKX3 1938 aa19.09■□□□□ 0.65
NCSTN-210ENST00000465223 HOXD11P31277 338 aaPredicted RBP19.08■□□□□ 0.64
NCSTN-210ENST00000465223 CACNB2Q08289 660 aaPredicted RBP19.08■□□□□ 0.64
NCSTN-210ENST00000465223 TWISTNBQ3B726 338 aaPredicted RBP19.08■□□□□ 0.64
NCSTN-210ENST00000465223 USP40Q9NVE5 1235 aa19.08■□□□□ 0.64
NCSTN-210ENST00000465223 F6X3S4 739 aa19.07■□□□□ 0.64
NCSTN-210ENST00000465223 SENP6Q9GZR1 1112 aaPredicted RBP19.07■□□□□ 0.64
NCSTN-210ENST00000465223 LRRFIP2Q9Y608 721 aaKnown RBP19.07■□□□□ 0.64
NCSTN-210ENST00000465223 LOC285556D6RIA3 1793 aa19.06■□□□□ 0.64
NCSTN-210ENST00000465223 MROH5Q6ZUA9 1318 aa19.06■□□□□ 0.64
NCSTN-210ENST00000465223 PEX10O60683 326 aa19.06■□□□□ 0.64
NCSTN-210ENST00000465223 GCLCP48506 637 aaPredicted RBP19.06■□□□□ 0.64
NCSTN-210ENST00000465223 ATN1P54259 1190 aaPredicted RBP19.06■□□□□ 0.64
NCSTN-210ENST00000465223 BEND3Q5T5X7 828 aa19.06■□□□□ 0.64
NCSTN-210ENST00000465223 SH3BP5LQ7L8J4 393 aa19.06■□□□□ 0.64
NCSTN-210ENST00000465223 MAP3K12Q12852 859 aa19.05■□□□□ 0.64
NCSTN-210ENST00000465223 LRRC24Q50LG9 513 aa19.05■□□□□ 0.64
NCSTN-210ENST00000465223 MUC3AQ02505 3323 aa19.04■□□□□ 0.64
NCSTN-210ENST00000465223 GRM8O00222 908 aa19.04■□□□□ 0.64
NCSTN-210ENST00000465223 RGS3P49796 1198 aa19.04■□□□□ 0.64
NCSTN-210ENST00000465223 SMAD3P84022 425 aaKnown RBP19.04■□□□□ 0.64
NCSTN-210ENST00000465223 METTL24Q5JXM2 366 aa19.04■□□□□ 0.64
NCSTN-210ENST00000465223 MYBBP1AQ9BQG0 1328 aaKnown RBP19.03■□□□□ 0.64
NCSTN-210ENST00000465223 CTNND1O60716 968 aaKnown RBP19.03■□□□□ 0.64
NCSTN-210ENST00000465223 CCL14Q16627 93 aa19.03■□□□□ 0.64
NCSTN-210ENST00000465223 ZSCAN29Q8IWY8 852 aaPredicted RBP19.03■□□□□ 0.64
NCSTN-210ENST00000465223 PROCA1Q8NCQ7 364 aaPredicted RBP19.03■□□□□ 0.64
NCSTN-210ENST00000465223 NUDT12Q9BQG2 462 aa19.03■□□□□ 0.64
NCSTN-210ENST00000465223 ASCC2Q9H1I8 757 aaPredicted RBP19.03■□□□□ 0.64
NCSTN-210ENST00000465223 SPINK5Q9NQ38 1064 aaPredicted RBP19.03■□□□□ 0.64
NCSTN-210ENST00000465223 PRKAG2Q9UGJ0 569 aa19.03■□□□□ 0.64
NCSTN-210ENST00000465223 DDTLA6NHG4 134 aaPredicted RBP19.02■□□□□ 0.64
NCSTN-210ENST00000465223 ZKSCAN1P17029 563 aaPredicted RBP19.02■□□□□ 0.64
NCSTN-210ENST00000465223 PRDX5P30044 214 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms