RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 DENND2AQ9ULE3 1009 aa13.64□□□□□ -0.23
COL11A1-207ENST00000465209 LRRFIP2Q9Y608 721 aaKnown RBP13.64□□□□□ -0.23
COL11A1-207ENST00000465209 ALPK3Q96L96 1907 aa13.64□□□□□ -0.23
COL11A1-207ENST00000465209 H0YGN5 161 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 CXCL11O14625 94 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 ENTPD3O75355 529 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
COL11A1-207ENST00000465209 CYP2C8P10632 490 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 PTPRAP18433 802 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
COL11A1-207ENST00000465209 RGS3P49796 1198 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 SCYL3Q8IZE3 742 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 FAM163AQ96GL9 167 aaPredicted RBP13.63□□□□□ -0.23
COL11A1-207ENST00000465209 PARK7Q99497 189 aaKnown RBP13.63□□□□□ -0.23
COL11A1-207ENST00000465209 MEIS3Q99687 375 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 CEP126Q9P2H0 1117 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 AFG3L2Q9Y4W6 797 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.63□□□□□ -0.23
COL11A1-207ENST00000465209 COL6A3P12111 3177 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 CDK5RAP2Q96SN8 1893 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 MYPNQ86TC9 1320 aa13.63□□□□□ -0.23
COL11A1-207ENST00000465209 DDTLA6NHG4 134 aaPredicted RBP13.62□□□□□ -0.23
COL11A1-207ENST00000465209 GRK4P32298 578 aa13.62□□□□□ -0.23
COL11A1-207ENST00000465209 PRKCZQ05513 592 aa13.62□□□□□ -0.23
COL11A1-207ENST00000465209 GNL3LQ9NVN8 582 aaKnown RBP13.62□□□□□ -0.23
COL11A1-207ENST00000465209 NOB1Q9ULX3 412 aaKnown RBP13.62□□□□□ -0.23
COL11A1-207ENST00000465209 FOCADQ5VW36 1801 aa13.62□□□□□ -0.23
COL11A1-207ENST00000465209 MAST2Q6P0Q8 1798 aa13.61□□□□□ -0.23
COL11A1-207ENST00000465209 CT47B1P0C2W7 299 aaPredicted RBP13.61□□□□□ -0.23
COL11A1-207ENST00000465209 GJA8P48165 433 aa13.61□□□□□ -0.23
COL11A1-207ENST00000465209 RHBDL3P58872 404 aa13.61□□□□□ -0.23
COL11A1-207ENST00000465209 PRO3102Q9H379 93 aa13.61□□□□□ -0.23
COL11A1-207ENST00000465209 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.61□□□□□ -0.23
COL11A1-207ENST00000465209 GABRQQ9UN88 632 aa13.61□□□□□ -0.23
COL11A1-207ENST00000465209 SLC45A1Q9Y2W3 748 aa13.61□□□□□ -0.23
COL11A1-207ENST00000465209 MROH7-TTC4A0A0A0MT08 1334 aa13.61□□□□□ -0.23
COL11A1-207ENST00000465209 COL2A1P02458 1487 aaPredicted RBP13.61□□□□□ -0.23
COL11A1-207ENST00000465209 PLXNB2O15031 1838 aa13.6□□□□□ -0.23
COL11A1-207ENST00000465209 FMNL1O95466 1100 aaPredicted RBP13.6□□□□□ -0.23
COL11A1-207ENST00000465209 GJB1P08034 283 aa13.6□□□□□ -0.23
COL11A1-207ENST00000465209 CCL5P13501 91 aa13.6□□□□□ -0.23
COL11A1-207ENST00000465209 HOXD10P28358 340 aa13.6□□□□□ -0.23
COL11A1-207ENST00000465209 MTX1Q13505 466 aa13.6□□□□□ -0.23
COL11A1-207ENST00000465209 ZGPATQ8N5A5 531 aaKnown RBP13.6□□□□□ -0.23
COL11A1-207ENST00000465209 RAET1EQ8TD07 263 aa13.6□□□□□ -0.23
COL11A1-207ENST00000465209 ZHX2Q9Y6X8 837 aa13.6□□□□□ -0.23
COL11A1-207ENST00000465209 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
COL11A1-207ENST00000465209 A0A1B0GUL7 405 aa13.59□□□□□ -0.23
COL11A1-207ENST00000465209 BTDP43251 543 aa13.59□□□□□ -0.23
COL11A1-207ENST00000465209 FCGRTP55899 365 aa13.59□□□□□ -0.23
COL11A1-207ENST00000465209 TIMM10P62072 90 aa13.59□□□□□ -0.23
COL11A1-207ENST00000465209 FASTKD5Q7L8L6 764 aaKnown RBP13.59□□□□□ -0.23
COL11A1-207ENST00000465209 API5Q9BZZ5 524 aaKnown RBP13.59□□□□□ -0.23
COL11A1-207ENST00000465209 GPR75-ASB3A0A0A6YYF3 556 aa13.58□□□□□ -0.24
COL11A1-207ENST00000465209 CTNND1O60716 968 aaKnown RBP13.58□□□□□ -0.24
COL11A1-207ENST00000465209 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
COL11A1-207ENST00000465209 MECOMQ03112 1051 aa13.58□□□□□ -0.24
COL11A1-207ENST00000465209 CCDC84Q86UT8 332 aaPredicted RBP13.58□□□□□ -0.24
COL11A1-207ENST00000465209 DZIP1Q86YF9 867 aaKnown RBP13.58□□□□□ -0.24
COL11A1-207ENST00000465209 SLAIN1Q8ND83 568 aa13.58□□□□□ -0.24
COL11A1-207ENST00000465209 NKX2-3Q8TAU0 364 aa13.58□□□□□ -0.24
COL11A1-207ENST00000465209 XAGE2Q96GT9 111 aa13.58□□□□□ -0.24
COL11A1-207ENST00000465209 TBC1D12O60347 775 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 RARSP54136 660 aaKnown RBP13.57□□□□□ -0.24
COL11A1-207ENST00000465209 TFCP2Q12800 502 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 PICALMQ13492 652 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 IRF5Q13568 498 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 PI16Q6UXB8 463 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 U2AF1L4Q8WU68 220 aaKnown RBP13.57□□□□□ -0.24
COL11A1-207ENST00000465209 RNF208Q9H0X6 261 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 UNC93B1Q9H1C4 597 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 PICK1Q9NRD5 415 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
COL11A1-207ENST00000465209 ABCF2Q9UG63 623 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 AGTPBP1Q9UPW5 1226 aa13.57□□□□□ -0.24
COL11A1-207ENST00000465209 FAM196BA6NMK8 535 aa13.56□□□□□ -0.24
COL11A1-207ENST00000465209 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-207ENST00000465209 FLT3LGP49771 235 aa13.56□□□□□ -0.24
COL11A1-207ENST00000465209 RRP1BQ14684 758 aaKnown RBP13.56□□□□□ -0.24
COL11A1-207ENST00000465209 TREML2Q5T2D2 321 aa13.56□□□□□ -0.24
COL11A1-207ENST00000465209 GADL1Q6ZQY3 521 aa13.56□□□□□ -0.24
COL11A1-207ENST00000465209 PXYLP1Q8TE99 480 aa13.56□□□□□ -0.24
COL11A1-207ENST00000465209 ARHGAP45Q92619 1136 aa13.56□□□□□ -0.24
COL11A1-207ENST00000465209 NSUN4Q96CB9 384 aaKnown RBP13.56□□□□□ -0.24
COL11A1-207ENST00000465209 PAK6Q9NQU5 681 aaPredicted RBP13.56□□□□□ -0.24
COL11A1-207ENST00000465209 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
COL11A1-207ENST00000465209 TRIM75PA6NK02 468 aa13.55□□□□□ -0.24
COL11A1-207ENST00000465209 SRGAP3O43295 1099 aa13.55□□□□□ -0.24
COL11A1-207ENST00000465209 ADCY3O60266 1144 aa13.55□□□□□ -0.24
COL11A1-207ENST00000465209 SGPL1O95470 568 aa13.55□□□□□ -0.24
COL11A1-207ENST00000465209 INHAP05111 366 aa13.55□□□□□ -0.24
COL11A1-207ENST00000465209 ELNP15502 786 aa13.55□□□□□ -0.24
COL11A1-207ENST00000465209 UBXN2AP68543 259 aa13.55□□□□□ -0.24
COL11A1-207ENST00000465209 MVPQ14764 893 aaKnown RBP13.55□□□□□ -0.24
COL11A1-207ENST00000465209 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-207ENST00000465209 SLF2Q8IX21 1173 aa13.55□□□□□ -0.24
COL11A1-207ENST00000465209 HDAC5Q9UQL6 1122 aa13.55□□□□□ -0.24
COL11A1-207ENST00000465209 FARP2O94887 1054 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms