RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 CACNA1SQ13698 1873 aa7.65□□□□□ -1.18
SSBP1-204ENST00000465167 COX20Q5RI15 118 aa7.65□□□□□ -1.18
SSBP1-204ENST00000465167 C2CD5Q86YS7 1000 aa7.65□□□□□ -1.18
SSBP1-204ENST00000465167 TIAM2Q8IVF5 1701 aa7.65□□□□□ -1.18
SSBP1-204ENST00000465167 CARMIL3Q8ND23 1372 aa7.65□□□□□ -1.18
SSBP1-204ENST00000465167 RHBDD1Q8TEB9 315 aa7.65□□□□□ -1.18
SSBP1-204ENST00000465167 ZNF622Q969S3 477 aaKnown RBP eCLIP7.65□□□□□ -1.18
SSBP1-204ENST00000465167 ZNF652Q9Y2D9 606 aa7.65□□□□□ -1.18
SSBP1-204ENST00000465167 CCDC88AQ3V6T2 1871 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 FAM187AA6NFU0 413 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 UPP2O95045 317 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 LMNB1P20700 586 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 KCNA3P22001 575 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 GTF2E1P29083 439 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-204ENST00000465167 IL6STP40189 918 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-204ENST00000465167 MARSP56192 900 aaKnown RBP7.64□□□□□ -1.19
SSBP1-204ENST00000465167 ARHGAP4P98171 946 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 FSTL1Q12841 308 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 FOXD4L5Q5VV16 416 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-204ENST00000465167 DNAJC14Q6Y2X3 702 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-204ENST00000465167 CNBD1Q8NA66 436 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 FOXD4L4Q8WXT5 416 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-204ENST00000465167 MYO19Q96H55 970 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 ZNF496Q96IT1 587 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-204ENST00000465167 SETDB2Q96T68 719 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 NMRK2Q9NPI5 230 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 LRFN2Q9ULH4 789 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 ZNF232Q9UNY5 417 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 HCN4Q9Y3Q4 1203 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 BCORQ6W2J9 1755 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 WDR90Q96KV7 1748 aa7.64□□□□□ -1.19
SSBP1-204ENST00000465167 TNFRSF10BO14763 440 aa7.63□□□□□ -1.19
SSBP1-204ENST00000465167 FAM13AO94988 1023 aa7.63□□□□□ -1.19
SSBP1-204ENST00000465167 CTSOP43234 321 aaPredicted RBP7.63□□□□□ -1.19
SSBP1-204ENST00000465167 RASSF7Q02833 373 aa7.63□□□□□ -1.19
SSBP1-204ENST00000465167 GNASQ5JWF2 1037 aa7.63□□□□□ -1.19
SSBP1-204ENST00000465167 SOGA3Q5TF21 947 aa7.63□□□□□ -1.19
SSBP1-204ENST00000465167 MRPL14Q6P1L8 145 aaKnown RBP7.63□□□□□ -1.19
SSBP1-204ENST00000465167 ALDH16A1Q8IZ83 802 aa7.63□□□□□ -1.19
SSBP1-204ENST00000465167 SMC1BQ8NDV3 1235 aa7.63□□□□□ -1.19
SSBP1-204ENST00000465167 PNNQ9H307 717 aaKnown RBP7.63□□□□□ -1.19
SSBP1-204ENST00000465167 POLMQ9NP87 494 aaPredicted RBP7.63□□□□□ -1.19
SSBP1-204ENST00000465167 SNRPA1P09661 255 aaKnown RBP7.62□□□□□ -1.19
SSBP1-204ENST00000465167 BMP2P12643 396 aa7.62□□□□□ -1.19
SSBP1-204ENST00000465167 EIF5P55010 431 aaKnown RBP7.62□□□□□ -1.19
SSBP1-204ENST00000465167 C4orf17Q53FE4 359 aa7.62□□□□□ -1.19
SSBP1-204ENST00000465167 NOM1Q5C9Z4 860 aaKnown RBP7.62□□□□□ -1.19
SSBP1-204ENST00000465167 TBC1D9BQ66K14 1250 aa7.62□□□□□ -1.19
SSBP1-204ENST00000465167 IL17REQ8NFR9 667 aa7.62□□□□□ -1.19
SSBP1-204ENST00000465167 BRIP1Q9BX63 1249 aa7.62□□□□□ -1.19
SSBP1-204ENST00000465167 RRAGCQ9HB90 399 aa7.62□□□□□ -1.19
SSBP1-204ENST00000465167 STIM2Q9P246 746 aa7.62□□□□□ -1.19
SSBP1-204ENST00000465167 ANKRD31Q8N7Z5 1873 aa7.62□□□□□ -1.19
SSBP1-204ENST00000465167 LAMB4A4D0S4 1761 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 CEMIPQ8WUJ3 1361 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 MAPK8IP3Q9UPT6 1336 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 DICER1Q9UPY3 1922 aaKnown RBP7.61□□□□□ -1.19
SSBP1-204ENST00000465167 SPATA31C2B4DYI2 1134 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 HTATSF1O43719 755 aaKnown RBP7.61□□□□□ -1.19
SSBP1-204ENST00000465167 A1BGP04217 495 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 VEGFAP15692 232 aaPredicted RBP7.61□□□□□ -1.19
SSBP1-204ENST00000465167 MPSTP25325 297 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 TXLNAP40222 546 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 RTN1Q16799 776 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 C6orf118Q5T5N4 469 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 C1orf53Q5VUE5 145 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 NBPF5PQ86XG9 351 aaPredicted RBP7.61□□□□□ -1.19
SSBP1-204ENST00000465167 PNISRQ8TF01 805 aaKnown RBP7.61□□□□□ -1.19
SSBP1-204ENST00000465167 PHACTR1Q9C0D0 580 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 ARFGEF2Q9Y6D5 1785 aa7.61□□□□□ -1.19
SSBP1-204ENST00000465167 GLTPD2A6NH11 291 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 DGAT1O75907 488 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 ERCC3P19447 782 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 PPP2R1AP30153 589 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 SMCPP49901 116 aaPredicted RBP7.6□□□□□ -1.19
SSBP1-204ENST00000465167 STYK1Q6J9G0 422 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 CLEC4GQ6UXB4 293 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 MCM10Q7L590 875 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 RNF217Q8TC41 542 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 MASTLQ96GX5 879 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 TAOK3Q9H2K8 898 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 DCTN4Q9UJW0 460 aa7.6□□□□□ -1.19
SSBP1-204ENST00000465167 COL11A2P13942 1736 aaPredicted RBP7.6□□□□□ -1.19
SSBP1-204ENST00000465167 DLG5Q8TDM6 1919 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 CAMTA2O94983 1202 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 PLA2G4AP47712 749 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 POU4F2Q12837 409 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 TAF7Q15545 349 aaPredicted RBP7.59□□□□□ -1.19
SSBP1-204ENST00000465167 CTC1Q2NKJ3 1217 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 C11orf91Q3C1V1 193 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 PRR5LQ6MZQ0 368 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 TPTE2Q6XPS3 522 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 KIF6Q6ZMV9 814 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 C7orf43Q8WVR3 580 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 PHACTR3Q96KR7 559 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 SUPT16HQ9Y5B9 1047 aaKnown RBP7.59□□□□□ -1.19
SSBP1-204ENST00000465167 FER1L6Q2WGJ9 1857 aa7.59□□□□□ -1.19
SSBP1-204ENST00000465167 GFRA3O60609 400 aa7.58□□□□□ -1.2
SSBP1-204ENST00000465167 BRD2P25440 801 aaKnown RBP7.58□□□□□ -1.2
SSBP1-204ENST00000465167 MAPK1P28482 360 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms