RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ADGRA2Q96PE1 1338 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 BTDP43251 543 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 ATF7IPQ6VMQ6 1270 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 SH3BP5LQ7L8J4 393 aa28.15■■■□□ 2.1
USP42-205ENST00000465073 MKI67P46013 3256 aaKnown RBP28.14■■■□□ 2.1
USP42-205ENST00000465073 MROH7-TTC4A0A0A0MT08 1334 aa28.14■■■□□ 2.1
USP42-205ENST00000465073 HOXD10P28358 340 aa28.14■■■□□ 2.09
USP42-205ENST00000465073 PSMC4P43686 418 aa28.14■■■□□ 2.09
USP42-205ENST00000465073 SH3TC2Q8TF17 1288 aa28.14■■■□□ 2.09
USP42-205ENST00000465073 PARK7Q99497 189 aaKnown RBP28.14■■■□□ 2.09
USP42-205ENST00000465073 ZHX2Q9Y6X8 837 aa28.14■■■□□ 2.09
USP42-205ENST00000465073 MYH2Q9UKX2 1941 aa28.13■■■□□ 2.09
USP42-205ENST00000465073 MECOMQ03112 1051 aa28.13■■■□□ 2.09
USP42-205ENST00000465073 GORABQ5T7V8 394 aa28.13■■■□□ 2.09
USP42-205ENST00000465073 GPAT2Q6NUI2 795 aa28.13■■■□□ 2.09
USP42-205ENST00000465073 FASTKD5Q7L8L6 764 aaKnown RBP28.13■■■□□ 2.09
USP42-205ENST00000465073 DDX4Q9NQI0 724 aaKnown RBP28.13■■■□□ 2.09
USP42-205ENST00000465073 GPR75-ASB3A0A0A6YYF3 556 aa28.12■■■□□ 2.09
USP42-205ENST00000465073 DDTLA6NHG4 134 aaPredicted RBP28.12■■■□□ 2.09
USP42-205ENST00000465073 PTPRAP18433 802 aa28.12■■■□□ 2.09
USP42-205ENST00000465073 FRAT1Q92837 279 aaPredicted RBP28.12■■■□□ 2.09
USP42-205ENST00000465073 TRIM47Q96LD4 638 aa28.12■■■□□ 2.09
USP42-205ENST00000465073 HMG20BQ9P0W2 317 aa28.12■■■□□ 2.09
USP42-205ENST00000465073 SRRDQ9UH36 339 aa28.12■■■□□ 2.09
USP42-205ENST00000465073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.12■■■□□ 2.09
USP42-205ENST00000465073 CTNND1O60716 968 aaKnown RBP28.11■■■□□ 2.09
USP42-205ENST00000465073 CTGFP29279 349 aa28.11■■■□□ 2.09
USP42-205ENST00000465073 A0A0G2JLL6 359 aaPredicted RBP28.1■■■□□ 2.09
USP42-205ENST00000465073 NPM3O75607 178 aaKnown RBP28.1■■■□□ 2.09
USP42-205ENST00000465073 BCAR3O75815 825 aa28.1■■■□□ 2.09
USP42-205ENST00000465073 FMNL1O95466 1100 aaPredicted RBP28.1■■■□□ 2.09
USP42-205ENST00000465073 MAP4K4O95819 1239 aaPredicted RBP28.1■■■□□ 2.09
USP42-205ENST00000465073 LDHCP07864 332 aa28.1■■■□□ 2.09
USP42-205ENST00000465073 GSTO1P78417 241 aa28.1■■■□□ 2.09
USP42-205ENST00000465073 G3BP1Q13283 466 aaKnown RBP eCLIP28.1■■■□□ 2.09
USP42-205ENST00000465073 PICALMQ13492 652 aa28.1■■■□□ 2.09
USP42-205ENST00000465073 PRRT2Q7Z6L0 340 aaPredicted RBP28.1■■■□□ 2.09
USP42-205ENST00000465073 SPATA5Q8NB90 893 aa28.1■■■□□ 2.09
USP42-205ENST00000465073 AFG3L2Q9Y4W6 797 aa28.1■■■□□ 2.09
USP42-205ENST00000465073 ECM2O94769 699 aaPredicted RBP28.09■■■□□ 2.09
USP42-205ENST00000465073 MYCP01106 439 aaPredicted RBP28.09■■■□□ 2.09
USP42-205ENST00000465073 RHBDL3P58872 404 aa28.09■■■□□ 2.09
USP42-205ENST00000465073 ZNF384Q8TF68 577 aa28.09■■■□□ 2.09
USP42-205ENST00000465073 OSBPP22059 807 aa28.08■■■□□ 2.09
USP42-205ENST00000465073 CLUAP1Q96AJ1 413 aa28.08■■■□□ 2.09
USP42-205ENST00000465073 TNNQ9UQP3 1299 aa28.08■■■□□ 2.09
USP42-205ENST00000465073 PNMA6EA0A0J9YXQ4 647 aa28.08■■■□□ 2.09
USP42-205ENST00000465073 TBC1D12O60347 775 aa28.08■■■□□ 2.09
USP42-205ENST00000465073 CYP2C8P10632 490 aa28.08■■■□□ 2.09
USP42-205ENST00000465073 BCRP11274 1271 aa28.08■■■□□ 2.09
USP42-205ENST00000465073 ARID4AP29374 1257 aaPredicted RBP28.08■■■□□ 2.09
USP42-205ENST00000465073 RAET1EQ8TD07 263 aa28.08■■■□□ 2.09
USP42-205ENST00000465073 SLC45A1Q9Y2W3 748 aa28.08■■■□□ 2.09
USP42-205ENST00000465073 ZSWIM8A7E2V4 1837 aa28.08■■■□□ 2.08
USP42-205ENST00000465073 DOCK2Q92608 1830 aa28.07■■■□□ 2.08
USP42-205ENST00000465073 NSUN4Q96CB9 384 aaKnown RBP28.07■■■□□ 2.08
USP42-205ENST00000465073 BRCA2P51587 3418 aa28.06■■■□□ 2.08
USP42-205ENST00000465073 UQCRFS1P1P0C7P4 283 aa28.06■■■□□ 2.08
USP42-205ENST00000465073 PI16Q6UXB8 463 aa28.06■■■□□ 2.08
USP42-205ENST00000465073 TBC1D9Q6ZT07 1266 aa28.06■■■□□ 2.08
USP42-205ENST00000465073 GRK4P32298 578 aa28.05■■■□□ 2.08
USP42-205ENST00000465073 FCGRTP55899 365 aa28.05■■■□□ 2.08
USP42-205ENST00000465073 GADL1Q6ZQY3 521 aa28.05■■■□□ 2.08
USP42-205ENST00000465073 RAI14Q9P0K7 980 aa28.05■■■□□ 2.08
USP42-205ENST00000465073 MYPNQ86TC9 1320 aa28.05■■■□□ 2.08
USP42-205ENST00000465073 SLURP2P0DP57 97 aa28.04■■■□□ 2.08
USP42-205ENST00000465073 TRIM75PA6NK02 468 aa28.02■■■□□ 2.08
USP42-205ENST00000465073 MCAMP43121 646 aa28.02■■■□□ 2.08
USP42-205ENST00000465073 ZKSCAN2Q63HK3 967 aa28.02■■■□□ 2.08
USP42-205ENST00000465073 TMEM57Q8N5G2 664 aa28.02■■■□□ 2.08
USP42-205ENST00000465073 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.02■■■□□ 2.08
USP42-205ENST00000465073 LRP2BPQ9P2M1 347 aa28.02■■■□□ 2.08
USP42-205ENST00000465073 MTFR1Q15390 333 aa28.02■■■□□ 2.08
USP42-205ENST00000465073 HABP4Q5JVS0 413 aaKnown RBP28.02■■■□□ 2.08
USP42-205ENST00000465073 GPR108Q9NPR9 543 aa28.02■■■□□ 2.08
USP42-205ENST00000465073 OSBPL5Q9H0X9 879 aaPredicted RBP28.01■■■□□ 2.07
USP42-205ENST00000465073 COL2A1P02458 1487 aaPredicted RBP28.01■■■□□ 2.07
USP42-205ENST00000465073 PRKCZQ05513 592 aa28■■■□□ 2.07
USP42-205ENST00000465073 POLA2Q14181 598 aa28■■■□□ 2.07
USP42-205ENST00000465073 NKX2-3Q8TAU0 364 aa28■■■□□ 2.07
USP42-205ENST00000465073 AGTPBP1Q9UPW5 1226 aa28■■■□□ 2.07
USP42-205ENST00000465073 TEX11Q8IYF3 940 aa27.99■■■□□ 2.07
USP42-205ENST00000465073 SMCR8Q8TEV9 937 aaPredicted RBP27.99■■■□□ 2.07
USP42-205ENST00000465073 NOL10Q9BSC4 688 aaKnown RBP27.99■■■□□ 2.07
USP42-205ENST00000465073 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.99■■■□□ 2.07
USP42-205ENST00000465073 BIN2Q9UBW5 565 aaPredicted RBP27.99■■■□□ 2.07
USP42-205ENST00000465073 UBXN2AP68543 259 aa27.98■■■□□ 2.07
USP42-205ENST00000465073 ATP8B2P98198 1209 aa27.98■■■□□ 2.07
USP42-205ENST00000465073 SSH3Q8TE77 659 aa27.98■■■□□ 2.07
USP42-205ENST00000465073 TBC1D2Q9BYX2 928 aa27.98■■■□□ 2.07
USP42-205ENST00000465073 DOCK1Q14185 1865 aa27.98■■■□□ 2.07
USP42-205ENST00000465073 FAM196BA6NMK8 535 aa27.97■■■□□ 2.07
USP42-205ENST00000465073 OS9Q13438 667 aaPredicted RBP27.97■■■□□ 2.07
USP42-205ENST00000465073 TNNI3KQ59H18 835 aa27.97■■■□□ 2.07
USP42-205ENST00000465073 CCDC158Q5M9N0 1113 aa27.97■■■□□ 2.07
USP42-205ENST00000465073 CCDC84Q86UT8 332 aaPredicted RBP27.97■■■□□ 2.07
USP42-205ENST00000465073 SLAIN1Q8ND83 568 aa27.97■■■□□ 2.07
USP42-205ENST00000465073 FPGT-TNNI3KV9GXZ4 949 aa27.97■■■□□ 2.07
USP42-205ENST00000465073 BAG3O95817 575 aa27.96■■■□□ 2.07
USP42-205ENST00000465073 GJB1P08034 283 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms