RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 VEZTQ9HBM0 779 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 GNL3LQ9NVN8 582 aaKnown RBP4.2□□□□□ -1.74
COL8A1-205ENST00000463753 VPS18Q9P253 973 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 ADAM21Q9UKJ8 722 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 DAPK1P53355 1430 aa4.2□□□□□ -1.74
COL8A1-205ENST00000463753 CFAP65Q6ZU64 1925 aaKnown RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 SCN7AQ01118 1682 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 MAP2P11137 1827 aaKnown RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 FOXN1O15353 648 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 ERLIN2O94905 339 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 HNRNPH1P31943 449 aaKnown RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 RDXP35241 583 aaKnown RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 USP8P40818 1118 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 ECE1P42892 770 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 SLFN5Q08AF3 891 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 SLFNL1Q499Z3 407 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 WWC2Q6AWC2 1192 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 GIMAP6Q6P9H5 292 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 RINLQ6ZS11 566 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 REXO1L1PQ8IX06 675 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 ACRBPQ8NEB7 543 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 SYMPKQ92797 1274 aaKnown RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 ERCC4Q92889 916 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 HLA-CQ95604 372 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 USB1Q9BQ65 265 aaKnown RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 LNPKQ9C0E8 428 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 SPATS2LQ9NUQ6 558 aaKnown RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 ANKRD36BQ8N2N9 1353 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 KIF2AO00139 706 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 MYBL2P10244 700 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 RLBP1P12271 317 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 H2AFXP16104 143 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 YBX3P16989 372 aaKnown RBP eCLIP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 GNL2Q13823 731 aaKnown RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 PDE3AQ14432 1141 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 FAM109BQ6ICB4 259 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 RNF19BQ6ZMZ0 732 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 ANKRD23Q86SG2 305 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 EFCAB13Q8IY85 973 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 TEX11Q8IYF3 940 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 ARL10Q8N8L6 244 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 KLHL23Q8NBE8 558 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 PARD3BQ8TEW8 1205 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 KAT2BQ92831 832 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 ZDHHC9Q9Y397 364 aa4.19□□□□□ -1.74
COL8A1-205ENST00000463753 COL2A1P02458 1487 aaPredicted RBP4.19□□□□□ -1.74
COL8A1-205ENST00000463753 METP08581 1390 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 AK9Q5TCS8 1911 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 COQ9O75208 318 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 CYP2E1P05181 493 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ABCD1P33897 745 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 GUCA2AQ02747 115 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ADCY2Q08462 1091 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 NEDD9Q14511 834 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 PUS10Q3MIT2 529 aaKnown RBP4.18□□□□□ -1.74
COL8A1-205ENST00000463753 RNF20Q5VTR2 975 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 LRRC31Q6UY01 552 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 RPUSD2Q8IZ73 545 aaKnown RBP4.18□□□□□ -1.74
COL8A1-205ENST00000463753 PROCA1Q8NCQ7 364 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ZNF516Q92618 1163 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ZBTB10Q96DT7 871 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 SPSB2Q99619 263 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 SH3GL3Q99963 347 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 EPC1Q9H2F5 836 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 RMI1Q9H9A7 625 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 KIF9Q9HAQ2 790 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 PLA2G2EQ9NZK7 142 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 MRFAP1Q9Y605 127 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 SASH3O75995 380 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 PYGLP06737 847 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 FXR1P51114 621 aaKnown RBP eCLIP4.18□□□□□ -1.74
COL8A1-205ENST00000463753 SCRN1Q12765 414 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 TMEM259Q4ZIN3 620 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 INTS3Q68E01 1043 aaKnown RBP4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ZSCAN25Q6NSZ9 544 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ANKRD18AQ8IVF6 992 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 WDR63Q8IWG1 891 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ZNF483Q8TF39 744 aaPredicted RBP4.18□□□□□ -1.74
COL8A1-205ENST00000463753 UBXN4Q92575 508 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 KCNB2Q92953 911 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 EXOC4Q96A65 974 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 TRIM5Q9C035 493 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 TMEM165Q9HC07 324 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ZNF232Q9UNY5 417 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ROBO2Q9HCK4 1378 aa4.18□□□□□ -1.74
COL8A1-205ENST00000463753 ENO4A6NNW6 628 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CCP110O43303 1012 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 GCFC2P16383 781 aaKnown RBP4.17□□□□□ -1.74
COL8A1-205ENST00000463753 PAX3P23760 479 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 MCM2P49736 904 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CLNS1AP54105 237 aaKnown RBP4.17□□□□□ -1.74
COL8A1-205ENST00000463753 NAA25Q14CX7 972 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CCDC183Q5T5S1 534 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CCDC30Q5VVM6 783 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 LYPD8Q6UX82 237 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 FILIP1Q7Z7B0 1213 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 USP48Q86UV5 1035 aa4.17□□□□□ -1.74
COL8A1-205ENST00000463753 CCDC26Q8TAB7 109 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms