RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 NTRK3Q16288 839 aa9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 ALG1Q9BT22 464 aa9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 AP5Z1O43299 807 aa9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 CDKL5O76039 1030 aa9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 ADCY5O95622 1261 aa9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 HIBADHP31937 336 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 CHAF1AQ13111 956 aaPredicted RBP9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 HS1BP3Q53T59 392 aa9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 ATL3Q6DD88 541 aa9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 RBM43Q6ZSC3 357 aaKnown RBP9.42□□□□□ -0.9
PRPF4B-203ENST00000463634 MSNP26038 577 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 PRDX5P30044 214 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 IARSP41252 1262 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 RBM10P98175 930 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 MECOMQ03112 1051 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 EVX2Q03828 476 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 SNW1Q13573 536 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 ANO6Q4KMQ2 910 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 MYSM1Q5VVJ2 828 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 NSUN4Q96CB9 384 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 ANKRD2Q9GZV1 360 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 RTEL1Q9NZ71 1219 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 NOL7Q9UMY1 257 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 PCDHA7Q9UN72 937 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 ECM29Q5VYK3 1845 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 PTMAP06454 111 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 WTAPQ15007 396 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 KRT40Q6A162 431 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 CPLX2Q6PUV4 134 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 LUZP1Q86V48 1076 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 CMTR1Q8N1G2 835 aaKnown RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 KLHL34Q8N239 644 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 LINC00301Q8NCQ3 95 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 NAP1L5Q96NT1 182 aaPredicted RBP9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 SLC26A6Q9BXS9 759 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 CCDC39Q9UFE4 941 aa9.41□□□□□ -0.9
PRPF4B-203ENST00000463634 SEMA3EO15041 775 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 ONECUT3O60422 494 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 PRDM1O75626 825 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 SART3Q15020 963 aaKnown RBP9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 STK38Q15208 465 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 CCDC73Q6ZRK6 1079 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 BRAPQ7Z569 592 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 FSIP1Q8NA03 581 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 CNBD1Q8NA66 436 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 RNF41Q9H4P4 317 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 AATFQ9NY61 560 aaKnown RBP eCLIP9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 BAZ2AQ9UIF9 1905 aaKnown RBP9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 MYH13Q9UKX3 1938 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 GUCY1A2P33402 732 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 SYNE3Q6ZMZ3 975 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 ENGASEQ8NFI3 743 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 FAM200AQ8TCP9 573 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 GPR101Q96P66 508 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 UBAC1Q9BSL1 405 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 POLR3EQ9NVU0 708 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 ANAPC4Q9UJX5 808 aa9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 TRPC5Q9UL62 973 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-203ENST00000463634 TNKSO95271 1327 aa9.4□□□□□ -0.91
PRPF4B-203ENST00000463634 IRS2Q9Y4H2 1338 aa9.4□□□□□ -0.91
PRPF4B-203ENST00000463634 A0A1B0GVL5 298 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 ERICH2A1L162 156 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 FAM160A1Q05DH4 1040 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 SF3A1Q15459 793 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 SASS6Q6UVJ0 657 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 NUP133Q8WUM0 1156 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 ERCC4Q92889 916 aaPredicted RBP9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 DNAJC25Q9H1X3 360 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 CBX8Q9HC52 389 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 ZKSCAN5Q9Y2L8 839 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 A0A087WWV3 80 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 SPTLC2O15270 562 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 KINO60870 393 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 NDUFA8P51970 172 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 GRAPQ13588 217 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 RTN1Q16799 776 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 PRR5LQ6MZQ0 368 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 CTR9Q6PD62 1173 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 GRAPLQ8TC17 118 aaPredicted RBP9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 CERKQ8TCT0 537 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 MRPS27Q92552 414 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 ESR2Q92731 530 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 BRIP1Q9BX63 1249 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 DUOX1Q9NRD9 1551 aa9.39□□□□□ -0.91
PRPF4B-203ENST00000463634 NID2Q14112 1375 aa9.38□□□□□ -0.91
PRPF4B-203ENST00000463634 USP17L12C9JPN9 530 aa9.38□□□□□ -0.91
PRPF4B-203ENST00000463634 USP17L21D6R901 530 aa9.38□□□□□ -0.91
PRPF4B-203ENST00000463634 YEATS4O95619 227 aa9.38□□□□□ -0.91
PRPF4B-203ENST00000463634 IFNAR1P17181 557 aa9.38□□□□□ -0.91
PRPF4B-203ENST00000463634 GNL2Q13823 731 aaKnown RBP9.38□□□□□ -0.91
PRPF4B-203ENST00000463634 SEC23AQ15436 765 aa9.38□□□□□ -0.91
PRPF4B-203ENST00000463634 SLC4A8Q2Y0W8 1093 aa9.38□□□□□ -0.91
PRPF4B-203ENST00000463634 ANO1Q5XXA6 986 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms