RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 PHIPQ8WWQ0 1821 aa21.52■■□□□ 1.04
HMGN1-209ENST00000463631 RGS3P49796 1198 aa21.52■■□□□ 1.04
HMGN1-209ENST00000463631 FCGRTP55899 365 aa21.52■■□□□ 1.04
HMGN1-209ENST00000463631 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
HMGN1-209ENST00000463631 SLC45A1Q9Y2W3 748 aa21.52■■□□□ 1.04
HMGN1-209ENST00000463631 SZT2Q5T011 3432 aa21.52■■□□□ 1.04
HMGN1-209ENST00000463631 CYP2C8P10632 490 aa21.51■■□□□ 1.03
HMGN1-209ENST00000463631 CCL5P13501 91 aa21.51■■□□□ 1.03
HMGN1-209ENST00000463631 PRKCZQ05513 592 aa21.51■■□□□ 1.03
HMGN1-209ENST00000463631 FASTKD5Q7L8L6 764 aaKnown RBP21.51■■□□□ 1.03
HMGN1-209ENST00000463631 SLAIN1Q8ND83 568 aa21.51■■□□□ 1.03
HMGN1-209ENST00000463631 COPRSQ9NQ92 184 aa21.51■■□□□ 1.03
HMGN1-209ENST00000463631 ECM2O94769 699 aaPredicted RBP21.5■■□□□ 1.03
HMGN1-209ENST00000463631 PTPRAP18433 802 aa21.5■■□□□ 1.03
HMGN1-209ENST00000463631 FAM163AQ96GL9 167 aaPredicted RBP21.5■■□□□ 1.03
HMGN1-209ENST00000463631 PICK1Q9NRD5 415 aa21.5■■□□□ 1.03
HMGN1-209ENST00000463631 HDAC5Q9UQL6 1122 aa21.5■■□□□ 1.03
HMGN1-209ENST00000463631 AFG3L2Q9Y4W6 797 aa21.5■■□□□ 1.03
HMGN1-209ENST00000463631 ZHX2Q9Y6X8 837 aa21.5■■□□□ 1.03
HMGN1-209ENST00000463631 UBXN2AP68543 259 aa21.49■■□□□ 1.03
HMGN1-209ENST00000463631 RASGRF1Q13972 1273 aa21.49■■□□□ 1.03
HMGN1-209ENST00000463631 CCDC102BQ68D86 513 aa21.49■■□□□ 1.03
HMGN1-209ENST00000463631 SH3BP5LQ7L8J4 393 aa21.49■■□□□ 1.03
HMGN1-209ENST00000463631 CT47B1P0C2W7 299 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-209ENST00000463631 SLF2Q8IX21 1173 aa21.48■■□□□ 1.03
HMGN1-209ENST00000463631 HTATIP2Q9BUP3 242 aa21.48■■□□□ 1.03
HMGN1-209ENST00000463631 RNF208Q9H0X6 261 aa21.48■■□□□ 1.03
HMGN1-209ENST00000463631 LRRFIP2Q9Y608 721 aaKnown RBP21.48■■□□□ 1.03
HMGN1-209ENST00000463631 CTNND1O60716 968 aaKnown RBP21.47■■□□□ 1.03
HMGN1-209ENST00000463631 CAPN2P17655 700 aa21.47■■□□□ 1.03
HMGN1-209ENST00000463631 ADORA1P30542 326 aa21.47■■□□□ 1.03
HMGN1-209ENST00000463631 CHRDL2Q6WN34 429 aa21.47■■□□□ 1.03
HMGN1-209ENST00000463631 DZIP1Q86YF9 867 aaKnown RBP21.47■■□□□ 1.03
HMGN1-209ENST00000463631 TRMT2AQ8IZ69 625 aaKnown RBP21.47■■□□□ 1.03
HMGN1-209ENST00000463631 COL2A1P02458 1487 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-209ENST00000463631 LOC285556D6RIA3 1793 aa21.46■■□□□ 1.03
HMGN1-209ENST00000463631 NPM3O75607 178 aaKnown RBP21.46■■□□□ 1.03
HMGN1-209ENST00000463631 SPTY2D1Q68D10 685 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-209ENST00000463631 PXYLP1Q8TE99 480 aa21.46■■□□□ 1.03
HMGN1-209ENST00000463631 U2AF1L4Q8WU68 220 aaKnown RBP21.46■■□□□ 1.03
HMGN1-209ENST00000463631 DPF3Q92784 378 aa21.46■■□□□ 1.03
HMGN1-209ENST00000463631 API5Q9BZZ5 524 aaKnown RBP21.46■■□□□ 1.03
HMGN1-209ENST00000463631 DDX4Q9NQI0 724 aaKnown RBP21.46■■□□□ 1.03
HMGN1-209ENST00000463631 BIN2Q9UBW5 565 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-209ENST00000463631 PA2G4Q9UQ80 394 aaKnown RBP21.46■■□□□ 1.03
HMGN1-209ENST00000463631 MROH7-TTC4A0A0A0MT08 1334 aa21.46■■□□□ 1.03
HMGN1-209ENST00000463631 DDTLA6NHG4 134 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-209ENST00000463631 IRF5Q13568 498 aa21.45■■□□□ 1.02
HMGN1-209ENST00000463631 ZSCAN29Q8IWY8 852 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-209ENST00000463631 PRO3102Q9H379 93 aa21.45■■□□□ 1.02
HMGN1-209ENST00000463631 GABRQQ9UN88 632 aa21.45■■□□□ 1.02
HMGN1-209ENST00000463631 ADCY3O60266 1144 aa21.44■■□□□ 1.02
HMGN1-209ENST00000463631 FARP2O94887 1054 aaPredicted RBP21.44■■□□□ 1.02
HMGN1-209ENST00000463631 BTDP43251 543 aa21.44■■□□□ 1.02
HMGN1-209ENST00000463631 FLT3LGP49771 235 aa21.44■■□□□ 1.02
HMGN1-209ENST00000463631 GADL1Q6ZQY3 521 aa21.44■■□□□ 1.02
HMGN1-209ENST00000463631 CDCA7LQ96GN5 454 aa21.44■■□□□ 1.02
HMGN1-209ENST00000463631 UNC93B1Q9H1C4 597 aa21.44■■□□□ 1.02
HMGN1-209ENST00000463631 RBM27Q9P2N5 1060 aaKnown RBP21.44■■□□□ 1.02
HMGN1-209ENST00000463631 AGTPBP1Q9UPW5 1226 aa21.44■■□□□ 1.02
HMGN1-209ENST00000463631 GPR75-ASB3A0A0A6YYF3 556 aa21.43■■□□□ 1.02
HMGN1-209ENST00000463631 TBC1D12O60347 775 aa21.43■■□□□ 1.02
HMGN1-209ENST00000463631 MTX1Q13505 466 aa21.43■■□□□ 1.02
HMGN1-209ENST00000463631 SMCR8Q8TEV9 937 aaPredicted RBP21.43■■□□□ 1.02
HMGN1-209ENST00000463631 MEIS3Q99687 375 aa21.43■■□□□ 1.02
HMGN1-209ENST00000463631 ABCF2Q9UG63 623 aa21.43■■□□□ 1.02
HMGN1-209ENST00000463631 NOB1Q9ULX3 412 aaKnown RBP21.43■■□□□ 1.02
HMGN1-209ENST00000463631 A0A1B0GUL7 405 aa21.42■■□□□ 1.02
HMGN1-209ENST00000463631 TNPO2O14787 897 aaKnown RBP21.42■■□□□ 1.02
HMGN1-209ENST00000463631 SGPL1O95470 568 aa21.42■■□□□ 1.02
HMGN1-209ENST00000463631 MAP4K4O95819 1239 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-209ENST00000463631 INHAP05111 366 aa21.42■■□□□ 1.02
HMGN1-209ENST00000463631 RHBDL3P58872 404 aa21.42■■□□□ 1.02
HMGN1-209ENST00000463631 MVPQ14764 893 aaKnown RBP21.42■■□□□ 1.02
HMGN1-209ENST00000463631 ATAD5Q96QE3 1844 aa21.42■■□□□ 1.02
HMGN1-209ENST00000463631 AKAP2Q9Y2D5 859 aa21.42■■□□□ 1.02
HMGN1-209ENST00000463631 NR2E3Q9Y5X4 410 aa21.42■■□□□ 1.02
HMGN1-209ENST00000463631 TRIM75PA6NK02 468 aa21.41■■□□□ 1.02
HMGN1-209ENST00000463631 TIMM10P62072 90 aa21.41■■□□□ 1.02
HMGN1-209ENST00000463631 MECOMQ03112 1051 aa21.41■■□□□ 1.02
HMGN1-209ENST00000463631 PICALMQ13492 652 aa21.41■■□□□ 1.02
HMGN1-209ENST00000463631 FAM110CQ1W6H9 321 aa21.41■■□□□ 1.02
HMGN1-209ENST00000463631 ZNF384Q8TF68 577 aa21.41■■□□□ 1.02
HMGN1-209ENST00000463631 PAK6Q9NQU5 681 aaPredicted RBP21.41■■□□□ 1.02
HMGN1-209ENST00000463631 PNMA3Q9UL41 463 aa21.41■■□□□ 1.02
HMGN1-209ENST00000463631 DOCK3Q8IZD9 2030 aa21.41■■□□□ 1.02
HMGN1-209ENST00000463631 ZBTB7BO15156 539 aaPredicted RBP21.4■■□□□ 1.02
HMGN1-209ENST00000463631 SLURP2P0DP57 97 aa21.4■■□□□ 1.02
HMGN1-209ENST00000463631 ELNP15502 786 aa21.4■■□□□ 1.02
HMGN1-209ENST00000463631 PROCA1Q8NCQ7 364 aaPredicted RBP21.4■■□□□ 1.02
HMGN1-209ENST00000463631 XAGE2Q96GT9 111 aa21.4■■□□□ 1.02
HMGN1-209ENST00000463631 ERICH6Q7L0X2 663 aa21.39■■□□□ 1.01
HMGN1-209ENST00000463631 TBC1D2Q9BYX2 928 aa21.39■■□□□ 1.01
HMGN1-209ENST00000463631 OSBPL5Q9H0X9 879 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-209ENST00000463631 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
HMGN1-209ENST00000463631 A0A1W2PPC1 479 aa21.38■■□□□ 1.01
HMGN1-209ENST00000463631 GNAI3P08754 354 aa21.38■■□□□ 1.01
HMGN1-209ENST00000463631 TFCP2Q12800 502 aa21.38■■□□□ 1.01
HMGN1-209ENST00000463631 TREML2Q5T2D2 321 aa21.38■■□□□ 1.01
HMGN1-209ENST00000463631 ARHGAP45Q92619 1136 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms