RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 B4GALNT3Q6L9W6 998 aa5.55□□□□□ -1.52
SCFD1-204ENST00000463622 ARMC10Q8N2F6 343 aa5.55□□□□□ -1.52
SCFD1-204ENST00000463622 DCAF11Q8TEB1 546 aa5.55□□□□□ -1.52
SCFD1-204ENST00000463622 BSNDQ8WZ55 320 aa5.55□□□□□ -1.52
SCFD1-204ENST00000463622 SLC26A8Q96RN1 970 aa5.55□□□□□ -1.52
SCFD1-204ENST00000463622 EGFL7Q9UHF1 273 aa5.55□□□□□ -1.52
SCFD1-204ENST00000463622 CCDC141Q6ZP82 1450 aa5.55□□□□□ -1.52
SCFD1-204ENST00000463622 ORC1Q13415 861 aa5.54□□□□□ -1.52
SCFD1-204ENST00000463622 IKBKEQ14164 716 aa5.54□□□□□ -1.52
SCFD1-204ENST00000463622 ABCC3O15438 1527 aa5.54□□□□□ -1.52
SCFD1-204ENST00000463622 SPRED3Q2MJR0 410 aa5.54□□□□□ -1.52
SCFD1-204ENST00000463622 OSGEPQ9NPF4 335 aa5.54□□□□□ -1.52
SCFD1-204ENST00000463622 LRRC9Q6ZRR7 1453 aa5.54□□□□□ -1.52
SCFD1-204ENST00000463622 ZC3H13Q5T200 1668 aaKnown RBP5.54□□□□□ -1.52
SCFD1-204ENST00000463622 FGD6Q6ZV73 1430 aa5.54□□□□□ -1.52
SCFD1-204ENST00000463622 FSTP19883 344 aa5.53□□□□□ -1.52
SCFD1-204ENST00000463622 C19orf57Q0VDD7 668 aa5.53□□□□□ -1.52
SCFD1-204ENST00000463622 ARTNQ5T4W7 220 aa5.53□□□□□ -1.52
SCFD1-204ENST00000463622 UTP4Q969X6 686 aaKnown RBP5.53□□□□□ -1.52
SCFD1-204ENST00000463622 USP26Q9BXU7 913 aa5.53□□□□□ -1.52
SCFD1-204ENST00000463622 RAXQ9Y2V3 346 aa5.53□□□□□ -1.52
SCFD1-204ENST00000463622 NCOA3Q9Y6Q9 1424 aa5.53□□□□□ -1.52
SCFD1-204ENST00000463622 MSH6P52701 1360 aa5.53□□□□□ -1.52
SCFD1-204ENST00000463622 PRDM15P57071 1507 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-204ENST00000463622 MAP3K1Q13233 1512 aa5.53□□□□□ -1.52
SCFD1-204ENST00000463622 TET3O43151 1660 aa5.53□□□□□ -1.52
SCFD1-204ENST00000463622 CDK12Q9NYV4 1490 aaPredicted RBP5.52□□□□□ -1.52
SCFD1-204ENST00000463622 A0A1W2PP55 124 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 DLGAP3O95886 979 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 GRIA4P48058 902 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 ARL4DP49703 201 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 TMC1Q8TDI8 760 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 WNT8BQ93098 351 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 RUSC1Q9BVN2 902 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 CEP41Q9BYV8 373 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 BHLHE41Q9C0J9 482 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-204ENST00000463622 ZFP64Q9NPA5 681 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 STOML1Q9UBI4 398 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 CAMSAP2Q08AD1 1489 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 LRP6O75581 1613 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 NDUFB5O43674 189 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 HYAL3O43820 417 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-204ENST00000463622 ESRRAP11474 423 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-204ENST00000463622 PREPP48147 710 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 GALNT12Q8IXK2 581 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 FAM46AQ96IP4 442 aaKnown RBP5.52□□□□□ -1.53
SCFD1-204ENST00000463622 NIF3L1Q9GZT8 377 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 C19orf44Q9H6X5 657 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 TBX22Q9Y458 520 aa5.52□□□□□ -1.53
SCFD1-204ENST00000463622 HMX2A2RU54 273 aa5.51□□□□□ -1.53
SCFD1-204ENST00000463622 DHX15O43143 795 aaKnown RBP5.51□□□□□ -1.53
SCFD1-204ENST00000463622 SART1O43290 800 aaKnown RBP5.51□□□□□ -1.53
SCFD1-204ENST00000463622 GSTM4Q03013 218 aa5.51□□□□□ -1.53
SCFD1-204ENST00000463622 MEX3CQ5U5Q3 659 aaKnown RBP5.51□□□□□ -1.53
SCFD1-204ENST00000463622 ERICH6Q7L0X2 663 aa5.51□□□□□ -1.53
SCFD1-204ENST00000463622 TRIM42Q8IWZ5 723 aa5.51□□□□□ -1.53
SCFD1-204ENST00000463622 TCF12Q99081 682 aa5.51□□□□□ -1.53
SCFD1-204ENST00000463622 LIN7BQ9HAP6 207 aa5.51□□□□□ -1.53
SCFD1-204ENST00000463622 SLC52A1Q9NWF4 448 aa5.51□□□□□ -1.53
SCFD1-204ENST00000463622 EHBP1L1Q8N3D4 1523 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 A0A096LPE4 126 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 A0A1W2PPZ6 126 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 GPR182O15218 404 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 BMP3P12645 472 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 RBM6P78332 1123 aaKnown RBP5.5□□□□□ -1.53
SCFD1-204ENST00000463622 ZNF423Q2M1K9 1284 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 CCNJLQ8IV13 435 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 RNF208Q9H0X6 261 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 KCNF1Q9H3M0 494 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 NPHS2Q9NP85 383 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 NKTRP30414 1462 aaKnown RBP5.5□□□□□ -1.53
SCFD1-204ENST00000463622 XIRP1Q702N8 1843 aaKnown RBP5.5□□□□□ -1.53
SCFD1-204ENST00000463622 ROBO1Q9Y6N7 1651 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 LOC100289279A0A1B0GTE1 492 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 DRD2P14416 443 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 C12orf50Q8NA57 414 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-204ENST00000463622 MYRFLQ96LU7 910 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 FAM129BQ96TA1 746 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 C7orf69Q9H7B7 122 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 ARHGEF5Q12774 1597 aa5.5□□□□□ -1.53
SCFD1-204ENST00000463622 AFF2P51816 1311 aa5.49□□□□□ -1.53
SCFD1-204ENST00000463622 UBR1Q8IWV7 1749 aa5.49□□□□□ -1.53
SCFD1-204ENST00000463622 SSTR4P31391 388 aa5.49□□□□□ -1.53
SCFD1-204ENST00000463622 LRP8Q14114 963 aa5.49□□□□□ -1.53
SCFD1-204ENST00000463622 FDX2Q6P4F2 183 aa5.49□□□□□ -1.53
SCFD1-204ENST00000463622 BRINP3Q76B58 766 aa5.49□□□□□ -1.53
SCFD1-204ENST00000463622 CCER1Q8TC90 406 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-204ENST00000463622 RNF112Q9ULX5 631 aa5.49□□□□□ -1.53
SCFD1-204ENST00000463622 MROH1Q8NDA8 1641 aa5.49□□□□□ -1.53
SCFD1-204ENST00000463622 NOS1P29475 1434 aa5.49□□□□□ -1.53
SCFD1-204ENST00000463622 CPNE3O75131 537 aaKnown RBP5.48□□□□□ -1.53
SCFD1-204ENST00000463622 IGLV1-40P01703 118 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 IGHA2P01877 340 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 ATF3P18847 181 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 PCDH1Q08174 1060 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 PDE3BQ13370 1112 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 NUTM2GQ5VZR2 741 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 FAM20CQ8IXL6 584 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 EHD4Q9H223 541 aa5.48□□□□□ -1.53
SCFD1-204ENST00000463622 RRP7BPQ9NSQ0 103 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms