RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 FMNL1O95466 1100 aaPredicted RBP28.75■■■□□ 2.19
SSNA1-203ENST00000463511 MTFR1Q15390 333 aa28.75■■■□□ 2.19
SSNA1-203ENST00000463511 GPAT2Q6NUI2 795 aa28.75■■■□□ 2.19
SSNA1-203ENST00000463511 ABCF2Q9UG63 623 aa28.75■■■□□ 2.19
SSNA1-203ENST00000463511 MYPNQ86TC9 1320 aa28.74■■■□□ 2.19
SSNA1-203ENST00000463511 CXCL11O14625 94 aa28.74■■■□□ 2.19
SSNA1-203ENST00000463511 CYP2C8P10632 490 aa28.74■■■□□ 2.19
SSNA1-203ENST00000463511 TIMM10P62072 90 aa28.74■■■□□ 2.19
SSNA1-203ENST00000463511 SH3BP5LQ7L8J4 393 aa28.74■■■□□ 2.19
SSNA1-203ENST00000463511 ZSCAN29Q8IWY8 852 aaPredicted RBP28.74■■■□□ 2.19
SSNA1-203ENST00000463511 SCYL3Q8IZE3 742 aa28.74■■■□□ 2.19
SSNA1-203ENST00000463511 RAET1EQ8TD07 263 aa28.74■■■□□ 2.19
SSNA1-203ENST00000463511 ZHX2Q9Y6X8 837 aa28.74■■■□□ 2.19
SSNA1-203ENST00000463511 ZBTB22O15209 634 aa28.73■■■□□ 2.19
SSNA1-203ENST00000463511 HOXD10P28358 340 aa28.73■■■□□ 2.19
SSNA1-203ENST00000463511 PICK1Q9NRD5 415 aa28.73■■■□□ 2.19
SSNA1-203ENST00000463511 PDS5AQ29RF7 1337 aaKnown RBP28.72■■■□□ 2.19
SSNA1-203ENST00000463511 SLURP2P0DP57 97 aa28.72■■■□□ 2.19
SSNA1-203ENST00000463511 BCRP11274 1271 aa28.72■■■□□ 2.19
SSNA1-203ENST00000463511 SHISA4Q96DD7 197 aa28.72■■■□□ 2.19
SSNA1-203ENST00000463511 A0A0G2JLL6 359 aaPredicted RBP28.71■■■□□ 2.19
SSNA1-203ENST00000463511 A0A1B0GUL7 405 aa28.71■■■□□ 2.19
SSNA1-203ENST00000463511 DDTLA6NHG4 134 aaPredicted RBP28.71■■■□□ 2.19
SSNA1-203ENST00000463511 PTPRAP18433 802 aa28.71■■■□□ 2.19
SSNA1-203ENST00000463511 GRK4P32298 578 aa28.71■■■□□ 2.19
SSNA1-203ENST00000463511 PICALMQ13492 652 aa28.71■■■□□ 2.19
SSNA1-203ENST00000463511 PRRT2Q7Z6L0 340 aaPredicted RBP28.71■■■□□ 2.19
SSNA1-203ENST00000463511 DDX4Q9NQI0 724 aaKnown RBP28.71■■■□□ 2.19
SSNA1-203ENST00000463511 BTDP43251 543 aa28.7■■■□□ 2.18
SSNA1-203ENST00000463511 RARSP54136 660 aaKnown RBP28.7■■■□□ 2.18
SSNA1-203ENST00000463511 TFCP2Q12800 502 aa28.7■■■□□ 2.18
SSNA1-203ENST00000463511 GADL1Q6ZQY3 521 aa28.7■■■□□ 2.18
SSNA1-203ENST00000463511 SLF2Q8IX21 1173 aa28.7■■■□□ 2.18
SSNA1-203ENST00000463511 XAGE2Q96GT9 111 aa28.7■■■□□ 2.18
SSNA1-203ENST00000463511 DOCK3Q8IZD9 2030 aa28.7■■■□□ 2.18
SSNA1-203ENST00000463511 MROH7-TTC4A0A0A0MT08 1334 aa28.69■■■□□ 2.18
SSNA1-203ENST00000463511 SRGAP3O43295 1099 aa28.69■■■□□ 2.18
SSNA1-203ENST00000463511 FCGRTP55899 365 aa28.69■■■□□ 2.18
SSNA1-203ENST00000463511 PRKCZQ05513 592 aa28.69■■■□□ 2.18
SSNA1-203ENST00000463511 SPTY2D1Q68D10 685 aaPredicted RBP28.69■■■□□ 2.18
SSNA1-203ENST00000463511 FASTKD5Q7L8L6 764 aaKnown RBP28.69■■■□□ 2.18
SSNA1-203ENST00000463511 COLQQ9Y215 455 aaPredicted RBP28.69■■■□□ 2.18
SSNA1-203ENST00000463511 AFG3L2Q9Y4W6 797 aa28.69■■■□□ 2.18
SSNA1-203ENST00000463511 FAM163AQ96GL9 167 aaPredicted RBP28.68■■■□□ 2.18
SSNA1-203ENST00000463511 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.68■■■□□ 2.18
SSNA1-203ENST00000463511 AKAP2Q9Y2D5 859 aa28.68■■■□□ 2.18
SSNA1-203ENST00000463511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.68■■■□□ 2.18
SSNA1-203ENST00000463511 TRIOBPQ9H2D6 2365 aa28.68■■■□□ 2.18
SSNA1-203ENST00000463511 LOC285556D6RIA3 1793 aa28.67■■■□□ 2.18
SSNA1-203ENST00000463511 H0YGN5 161 aa28.67■■■□□ 2.18
SSNA1-203ENST00000463511 GNAI3P08754 354 aa28.67■■■□□ 2.18
SSNA1-203ENST00000463511 FXR1P51114 621 aaKnown RBP eCLIP28.67■■■□□ 2.18
SSNA1-203ENST00000463511 MAP3K10Q02779 954 aa28.67■■■□□ 2.18
SSNA1-203ENST00000463511 MVPQ14764 893 aaKnown RBP28.67■■■□□ 2.18
SSNA1-203ENST00000463511 BIN2Q9UBW5 565 aaPredicted RBP28.67■■■□□ 2.18
SSNA1-203ENST00000463511 CDK5RAP2Q96SN8 1893 aa28.66■■■□□ 2.18
SSNA1-203ENST00000463511 CCL5P13501 91 aa28.66■■■□□ 2.18
SSNA1-203ENST00000463511 MECOMQ03112 1051 aa28.66■■■□□ 2.18
SSNA1-203ENST00000463511 MAST2Q6P0Q8 1798 aa28.65■■■□□ 2.18
SSNA1-203ENST00000463511 TRIM75PA6NK02 468 aa28.65■■■□□ 2.18
SSNA1-203ENST00000463511 CTNND1O60716 968 aaKnown RBP28.65■■■□□ 2.18
SSNA1-203ENST00000463511 MTX1Q13505 466 aa28.65■■■□□ 2.18
SSNA1-203ENST00000463511 ERICH6Q7L0X2 663 aa28.65■■■□□ 2.18
SSNA1-203ENST00000463511 CCDC84Q86UT8 332 aaPredicted RBP28.65■■■□□ 2.18
SSNA1-203ENST00000463511 ZNF384Q8TF68 577 aa28.65■■■□□ 2.18
SSNA1-203ENST00000463511 NEUROD6Q96NK8 337 aa28.65■■■□□ 2.18
SSNA1-203ENST00000463511 GABRQQ9UN88 632 aa28.65■■■□□ 2.18
SSNA1-203ENST00000463511 RHBDL3P58872 404 aa28.64■■■□□ 2.18
SSNA1-203ENST00000463511 PI16Q6UXB8 463 aa28.64■■■□□ 2.18
SSNA1-203ENST00000463511 ARHGAP45Q92619 1136 aa28.64■■■□□ 2.18
SSNA1-203ENST00000463511 RNF208Q9H0X6 261 aa28.64■■■□□ 2.18
SSNA1-203ENST00000463511 MYO5AQ9Y4I1 1855 aaKnown RBP28.63■■■□□ 2.17
SSNA1-203ENST00000463511 GPR75-ASB3A0A0A6YYF3 556 aa28.63■■■□□ 2.17
SSNA1-203ENST00000463511 SLAIN1Q8ND83 568 aa28.63■■■□□ 2.17
SSNA1-203ENST00000463511 NKX2-3Q8TAU0 364 aa28.63■■■□□ 2.17
SSNA1-203ENST00000463511 HMG20BQ9P0W2 317 aa28.63■■■□□ 2.17
SSNA1-203ENST00000463511 SLC45A1Q9Y2W3 748 aa28.63■■■□□ 2.17
SSNA1-203ENST00000463511 SIPA1L1O43166 1804 aa28.62■■■□□ 2.17
SSNA1-203ENST00000463511 FAM196BA6NMK8 535 aa28.62■■■□□ 2.17
SSNA1-203ENST00000463511 GJB1P08034 283 aa28.62■■■□□ 2.17
SSNA1-203ENST00000463511 GJA8P48165 433 aa28.62■■■□□ 2.17
SSNA1-203ENST00000463511 UBXN2AP68543 259 aa28.62■■■□□ 2.17
SSNA1-203ENST00000463511 SMCR8Q8TEV9 937 aaPredicted RBP28.62■■■□□ 2.17
SSNA1-203ENST00000463511 FOCADQ5VW36 1801 aa28.62■■■□□ 2.17
SSNA1-203ENST00000463511 BCAR3O75815 825 aa28.6■■■□□ 2.17
SSNA1-203ENST00000463511 GORABQ5T7V8 394 aa28.6■■■□□ 2.17
SSNA1-203ENST00000463511 TBC1D9Q6ZT07 1266 aa28.6■■■□□ 2.17
SSNA1-203ENST00000463511 SPATA5Q8NB90 893 aa28.6■■■□□ 2.17
SSNA1-203ENST00000463511 DPF3Q92784 378 aa28.6■■■□□ 2.17
SSNA1-203ENST00000463511 COL2A1P02458 1487 aaPredicted RBP28.59■■■□□ 2.17
SSNA1-203ENST00000463511 NSUN4Q96CB9 384 aaKnown RBP28.59■■■□□ 2.17
SSNA1-203ENST00000463511 UNC93B1Q9H1C4 597 aa28.59■■■□□ 2.17
SSNA1-203ENST00000463511 AGTPBP1Q9UPW5 1226 aa28.59■■■□□ 2.17
SSNA1-203ENST00000463511 TNNQ9UQP3 1299 aa28.59■■■□□ 2.17
SSNA1-203ENST00000463511 TNPO2O14787 897 aaKnown RBP28.58■■■□□ 2.17
SSNA1-203ENST00000463511 ADCY3O60266 1144 aa28.58■■■□□ 2.17
SSNA1-203ENST00000463511 TBC1D12O60347 775 aa28.58■■■□□ 2.17
SSNA1-203ENST00000463511 ELNP15502 786 aa28.58■■■□□ 2.17
SSNA1-203ENST00000463511 FLT3LGP49771 235 aa28.58■■■□□ 2.17
SSNA1-203ENST00000463511 GSTO1P78417 241 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms