RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 FOCADQ5VW36 1801 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 RPAP1Q9BWH6 1393 aaPredicted RBP10.53□□□□□ -0.72
TMEM254-208ENST00000463209 DDTLA6NHG4 134 aaPredicted RBP10.53□□□□□ -0.72
TMEM254-208ENST00000463209 TBC1D8O95759 1140 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 CHGBP05060 677 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 INPP5BP32019 993 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 GSTO1P78417 241 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 SLFNL1Q499Z3 407 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 FKBP1CQ5VVH2 108 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 NAA16Q6N069 864 aaPredicted RBP10.53□□□□□ -0.72
TMEM254-208ENST00000463209 ANKRD13AQ8IZ07 590 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 MAGEB6Q8N7X4 407 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 MIGA1Q8NAN2 632 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 ZNF512BQ96KM6 892 aaPredicted RBP10.53□□□□□ -0.72
TMEM254-208ENST00000463209 SNCAIPQ9Y6H5 919 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 CASP8AP2Q9UKL3 1982 aa10.53□□□□□ -0.72
TMEM254-208ENST00000463209 ATRNL1Q5VV63 1379 aa10.52□□□□□ -0.72
TMEM254-208ENST00000463209 GOLIM4O00461 696 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 RAB11FIP3O75154 756 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 CYP7A1P22680 504 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 IRX6P78412 446 aaPredicted RBP10.52□□□□□ -0.73
TMEM254-208ENST00000463209 MAP3K9P80192 1104 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 MAPKAPK5Q8IW41 473 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 SLF2Q8IX21 1173 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 TEX11Q8IYF3 940 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 FAM163AQ96GL9 167 aaPredicted RBP10.52□□□□□ -0.73
TMEM254-208ENST00000463209 IDI2Q9BXS1 227 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 LRRCC1Q9C099 1032 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 BOLA2Q9H3K6 86 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 R3HDMLQ9H3Y0 253 aa10.52□□□□□ -0.73
TMEM254-208ENST00000463209 DOCK1Q14185 1865 aa10.51□□□□□ -0.73
TMEM254-208ENST00000463209 IGF2BP3O00425 579 aaKnown RBP eCLIP10.51□□□□□ -0.73
TMEM254-208ENST00000463209 CCDC84Q86UT8 332 aaPredicted RBP10.51□□□□□ -0.73
TMEM254-208ENST00000463209 OTUD7AQ8TE49 926 aaPredicted RBP10.51□□□□□ -0.73
TMEM254-208ENST00000463209 ZNF341Q9BYN7 854 aa10.51□□□□□ -0.73
TMEM254-208ENST00000463209 PRDM10Q9NQV6 1147 aa10.51□□□□□ -0.73
TMEM254-208ENST00000463209 SAP30BPQ9UHR5 308 aaKnown RBP10.51□□□□□ -0.73
TMEM254-208ENST00000463209 CSADQ9Y600 493 aa10.51□□□□□ -0.73
TMEM254-208ENST00000463209 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
TMEM254-208ENST00000463209 NAV1Q8NEY1 1877 aa10.51□□□□□ -0.73
TMEM254-208ENST00000463209 ENTPD3O75355 529 aa10.5□□□□□ -0.73
TMEM254-208ENST00000463209 MAP4K4O95819 1239 aaPredicted RBP10.5□□□□□ -0.73
TMEM254-208ENST00000463209 LDHCP07864 332 aa10.5□□□□□ -0.73
TMEM254-208ENST00000463209 ZBTB48P10074 688 aaPredicted RBP10.5□□□□□ -0.73
TMEM254-208ENST00000463209 DCAF15Q66K64 600 aa10.5□□□□□ -0.73
TMEM254-208ENST00000463209 EXOC6Q8TAG9 804 aa10.5□□□□□ -0.73
TMEM254-208ENST00000463209 TGFBRAP1Q8WUH2 860 aa10.5□□□□□ -0.73
TMEM254-208ENST00000463209 NOL10Q9BSC4 688 aaKnown RBP10.5□□□□□ -0.73
TMEM254-208ENST00000463209 OSBPL5Q9H0X9 879 aaPredicted RBP10.5□□□□□ -0.73
TMEM254-208ENST00000463209 DCTPP1Q9H773 170 aa10.5□□□□□ -0.73
TMEM254-208ENST00000463209 SUPT16HQ9Y5B9 1047 aaKnown RBP10.5□□□□□ -0.73
TMEM254-208ENST00000463209 FLT1P17948 1338 aa10.5□□□□□ -0.73
TMEM254-208ENST00000463209 DDX60LQ5H9U9 1706 aaKnown RBP10.5□□□□□ -0.73
TMEM254-208ENST00000463209 MYH7P12883 1935 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 CA12O43570 354 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 PDE6AP16499 860 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 TM4SF4P48230 202 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 EVX2Q03828 476 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 SREBF2Q12772 1141 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 SHROOM1Q2M3G4 852 aaPredicted RBP10.49□□□□□ -0.73
TMEM254-208ENST00000463209 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 BRI3BPQ8WY22 251 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 PTPN18Q99952 460 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 PAG1Q9NWQ8 432 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 SAGE1Q9NXZ1 904 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 ZSWIM8A7E2V4 1837 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 PHIPQ8WWQ0 1821 aa10.49□□□□□ -0.73
TMEM254-208ENST00000463209 MYH1P12882 1939 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 CCL15-CCL14A0A0B4J2E2 113 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 MANSC4A6NHS7 340 aaPredicted RBP10.48□□□□□ -0.73
TMEM254-208ENST00000463209 PHF20L1A8MW92 1017 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 IRF6O14896 467 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 ECM2O94769 699 aaPredicted RBP10.48□□□□□ -0.73
TMEM254-208ENST00000463209 MAP3K12Q12852 859 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 RRP1BQ14684 758 aaKnown RBP10.48□□□□□ -0.73
TMEM254-208ENST00000463209 CCL15Q16663 113 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 SLC9C2Q5TAH2 1124 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 HOOK2Q96ED9 719 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 PALD1Q9ULE6 856 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 ZNF532Q9HCE3 1301 aa10.48□□□□□ -0.73
TMEM254-208ENST00000463209 BAG3O95817 575 aa10.47□□□□□ -0.73
TMEM254-208ENST00000463209 ATP5JP18859 108 aa10.47□□□□□ -0.73
TMEM254-208ENST00000463209 CRHR2Q13324 411 aa10.47□□□□□ -0.73
TMEM254-208ENST00000463209 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
TMEM254-208ENST00000463209 ERO1BQ86YB8 467 aa10.47□□□□□ -0.73
TMEM254-208ENST00000463209 FAM43AQ8N2R8 423 aa10.47□□□□□ -0.73
TMEM254-208ENST00000463209 LCORLQ8N3X6 602 aa10.47□□□□□ -0.73
TMEM254-208ENST00000463209 ZNF296Q8WUU4 475 aaPredicted RBP10.47□□□□□ -0.73
TMEM254-208ENST00000463209 HAUS7Q99871 368 aa10.47□□□□□ -0.73
TMEM254-208ENST00000463209 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.47□□□□□ -0.73
TMEM254-208ENST00000463209 ZNF112Q9UJU3 913 aa10.47□□□□□ -0.73
TMEM254-208ENST00000463209 MAGEB6P1A0A0J9YX57 407 aa10.46□□□□□ -0.73
TMEM254-208ENST00000463209 TCRBV5S4A2TA0A5A2 114 aa10.46□□□□□ -0.73
TMEM254-208ENST00000463209 MYCNP04198 464 aaPredicted RBP10.46□□□□□ -0.73
TMEM254-208ENST00000463209 USP5P45974 858 aa10.46□□□□□ -0.73
TMEM254-208ENST00000463209 PPP4CP60510 307 aa10.46□□□□□ -0.73
TMEM254-208ENST00000463209 JAG1P78504 1218 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms