RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ST7Q9NRC1 585 aa4.12□□□□□ -1.75
SMC4-203ENST00000462668 CREB3O43889 395 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 FBXO24O75426 580 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 PTPN11Q06124 597 aaPredicted RBP4.11□□□□□ -1.75
SMC4-203ENST00000462668 ZNF423Q2M1K9 1284 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 RUSC1Q9BVN2 902 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 IFRD1O00458 451 aaPredicted RBP4.11□□□□□ -1.75
SMC4-203ENST00000462668 SUSD5O60279 629 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 ALDH1A1P00352 501 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 GPLD1P80108 840 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 SEPT6Q14141 434 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 INAVAQ3KP66 663 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 C6orf15Q6UXA7 325 aaPredicted RBP4.11□□□□□ -1.75
SMC4-203ENST00000462668 TTC9Q92623 222 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 MIR1-1HGQ9H1L0 117 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 OSGEPQ9NPF4 335 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 STRN4Q9NRL3 753 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 GMIPQ9P107 970 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 ADAM30Q9UKF2 790 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 A0A1W2PQU0 124 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 CAND2O75155 1236 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 NME1P15531 152 aaKnown RBP4.11□□□□□ -1.75
SMC4-203ENST00000462668 SLC19A1P41440 591 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 LRRC14Q15048 493 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 MAP3K11Q16584 847 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 LYSMD3Q7Z3D4 306 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 ANKLE2Q86XL3 938 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 IL17RAQ96F46 866 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 RPS6KC1Q96S38 1066 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 PBX4Q9BYU1 374 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.11□□□□□ -1.75
SMC4-203ENST00000462668 SYNGAP1Q96PV0 1343 aa4.11□□□□□ -1.75
SMC4-203ENST00000462668 ABLIM3O94929 683 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 ARAFP10398 606 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 SOX5P35711 763 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 WDR4P57081 412 aaKnown RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 SFSWAPQ12872 951 aaKnown RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 RUFY4Q6ZNE9 571 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 CYFIP1Q7L576 1253 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 MTFR1LQ9H019 292 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 AVENQ9NQS1 362 aaPredicted RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 KLRG2A4D1S0 409 aaPredicted RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 J3QL48 77 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 GPR39O43194 453 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 PDE8AO60658 829 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 DNAJA2O60884 412 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 MORC3Q14149 939 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 SLC27A3Q5K4L6 730 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 TRIM67Q6ZTA4 783 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 STRA8Q7Z7C7 330 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 DHRS4Q9BTZ2 278 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 RTFDC1Q9BY42 306 aaPredicted RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 PHAXQ9H814 394 aaKnown RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 AKAP2Q9Y2D5 859 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 SPEF1Q9Y4P9 236 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 DNAJC8O75937 253 aaPredicted RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 FGFR1P11362 822 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 HTR3AP46098 478 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 CBX2Q14781 532 aaPredicted RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 UNC5AQ6ZN44 842 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 LRRC47Q8N1G4 583 aaKnown RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 EMILIN2Q9BXX0 1053 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 BSDC1Q9NW68 430 aaPredicted RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 R3HCC1Q9Y3T6 440 aaKnown RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 SNCAIPQ9Y6H5 919 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 COL17A1Q9UMD9 1497 aaPredicted RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 SLC22A31A6NKX4 558 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 PDE2AO00408 941 aaPredicted RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 F11P03951 625 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 PLAURQ03405 335 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 SSRP1Q08945 709 aaKnown RBP4.1□□□□□ -1.75
SMC4-203ENST00000462668 RIN3Q8TB24 985 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 ATG4CQ96DT6 458 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 MCM8Q9UJA3 840 aa4.1□□□□□ -1.75
SMC4-203ENST00000462668 SDSP20132 328 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 TARSP26639 723 aaKnown RBP4.09□□□□□ -1.75
SMC4-203ENST00000462668 CCNFP41002 786 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 KRT72Q14CN4 511 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 SPOCK3Q9BQ16 436 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 PCDHGC5Q9Y5F6 944 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 RASGRP1O95267 797 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 PHKA2P46019 1235 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 NEK2P51955 445 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 TESK1Q15569 626 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 FAM102BQ5T8I3 360 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 CLEC4GQ6UXB4 293 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 DHX32Q7L7V1 743 aaKnown RBP4.09□□□□□ -1.75
SMC4-203ENST00000462668 NME8Q8N427 588 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 TARS2Q9BW92 718 aaKnown RBP4.09□□□□□ -1.75
SMC4-203ENST00000462668 ANTXR1Q9H6X2 564 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 TIMMDC1Q9NPL8 285 aa4.09□□□□□ -1.75
SMC4-203ENST00000462668 METTL12A8MUP2 240 aa4.09□□□□□ -1.76
SMC4-203ENST00000462668 AVPP01185 164 aa4.09□□□□□ -1.76
SMC4-203ENST00000462668 GRIN3AQ8TCU5 1115 aa4.09□□□□□ -1.76
SMC4-203ENST00000462668 KRT82Q9NSB4 513 aa4.09□□□□□ -1.76
SMC4-203ENST00000462668 MRPS23Q9Y3D9 190 aaKnown RBP4.09□□□□□ -1.76
SMC4-203ENST00000462668 WASF2Q9Y6W5 498 aa4.09□□□□□ -1.76
SMC4-203ENST00000462668 SMCPP49901 116 aaPredicted RBP4.08□□□□□ -1.76
SMC4-203ENST00000462668 ZYXQ15942 572 aaKnown RBP4.08□□□□□ -1.76
SMC4-203ENST00000462668 CBARPQ8N350 705 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms