RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 LAMB1P07942 1786 aa17.72■□□□□ 0.43
RPRD1B-203ENST00000462548 USP17L8P0C7I0 530 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 SCNN1DP51172 638 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 STRIP1Q5VSL9 837 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 ZSWIM5Q9P217 1185 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 WDR19Q8NEZ3 1342 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 KDM4AO75164 1064 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 GRIPAP1Q4V328 841 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 TGFBRAP1Q8WUH2 860 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 SENP2Q9HC62 589 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 BRPF3Q9ULD4 1205 aa17.71■□□□□ 0.43
RPRD1B-203ENST00000462548 USP5P45974 858 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 SLC4A8Q2Y0W8 1093 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 DALRD3Q5D0E6 543 aaKnown RBP17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 RRP12Q5JTH9 1297 aaKnown RBP17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 GTF3C6Q969F1 213 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 NOL10Q9BSC4 688 aaKnown RBP17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 CD2APQ9Y5K6 639 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 NAV1Q8NEY1 1877 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 USP17L3A6NCW0 530 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 USP17L4A6NCW7 530 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 SBK1Q52WX2 424 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 USP17L1Q7RTZ2 530 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 MAPKAPK5Q8IW41 473 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 SLF2Q8IX21 1173 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 MCM9Q9NXL9 1143 aa17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.7■□□□□ 0.42
RPRD1B-203ENST00000462548 SH2B2O14492 632 aaPredicted RBP17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 PFKFB2O60825 505 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 EVCP57679 992 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 SCRN1Q12765 414 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 KRT23Q9C075 422 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 PDIA3P30101 505 aaKnown RBP17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 KIAA0825Q8IV33 1275 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 TEX11Q8IYF3 940 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 IGDCC4Q8TDY8 1250 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 CNNM2Q9H8M5 875 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 TOMM22Q9NS69 142 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 ARPP21Q9UBL0 812 aaPredicted RBP17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 SMC3Q9UQE7 1217 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 PCDHAC2Q9Y5I4 1007 aa17.69■□□□□ 0.42
RPRD1B-203ENST00000462548 PRDM1O75626 825 aa17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 FGRP09769 529 aa17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 FKBP1AP62942 108 aaKnown RBP17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 DDX60LQ5H9U9 1706 aaKnown RBP17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 GJB2P29033 226 aa17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 NUCB2P80303 420 aa17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 RNF41Q9H4P4 317 aaPredicted RBP17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 PSME4Q14997 1843 aa17.68■□□□□ 0.42
RPRD1B-203ENST00000462548 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 CCT2P78371 535 aaKnown RBP17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 C12orf60Q5U649 245 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 RAB11FIP4Q86YS3 637 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 LARGE2Q8N3Y3 721 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 ZNF274Q96GC6 653 aaPredicted RBP17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 ZKSCAN3Q9BRR0 538 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 NCOA5Q9HCD5 579 aaKnown RBP17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 SAP30BPQ9UHR5 308 aaKnown RBP17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 HPS5Q9UPZ3 1129 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 KLF18A0A0U1RQI7 1052 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 JAK2O60674 1132 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 SOGA3Q5TF21 947 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 HHIPL2Q6UWX4 724 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 LY9Q9HBG7 655 aa17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 NAP1L2Q9ULW6 460 aaPredicted RBP17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 ANGEL1Q9UNK9 670 aaKnown RBP17.67■□□□□ 0.42
RPRD1B-203ENST00000462548 FOCADQ5VW36 1801 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 FLT1P17948 1338 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 CTDNEP1O95476 244 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 CRKP46108 304 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 APOBEC3HQ6NTF7 200 aaKnown RBP17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 CERS3Q8IU89 383 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 NFKBIEO00221 500 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 BRD1O95696 1058 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 PLCG2P16885 1265 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 FOXD4L5Q5VV16 416 aaPredicted RBP17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 FOXD4L4Q8WXT5 416 aaPredicted RBP17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 TEKT1Q969V4 418 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 DYNLL2Q96FJ2 89 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 BCS1LQ9Y276 419 aa17.66■□□□□ 0.42
RPRD1B-203ENST00000462548 PLCD1P51178 756 aa17.65■□□□□ 0.42
RPRD1B-203ENST00000462548 TMEM67Q5HYA8 995 aa17.65■□□□□ 0.42
RPRD1B-203ENST00000462548 IFIT3O14879 490 aaKnown RBP17.64■□□□□ 0.42
RPRD1B-203ENST00000462548 RAD17O75943 681 aa17.64■□□□□ 0.42
RPRD1B-203ENST00000462548 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.42
RPRD1B-203ENST00000462548 CDC42EP5Q6NZY7 148 aa17.64■□□□□ 0.42
RPRD1B-203ENST00000462548 DDX4Q9NQI0 724 aaKnown RBP17.64■□□□□ 0.42
RPRD1B-203ENST00000462548 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.64■□□□□ 0.42
RPRD1B-203ENST00000462548 ORC4O43929 436 aa17.64■□□□□ 0.41
RPRD1B-203ENST00000462548 WDHD1O75717 1129 aaPredicted RBP17.64■□□□□ 0.41
RPRD1B-203ENST00000462548 SYT1P21579 422 aa17.64■□□□□ 0.41
RPRD1B-203ENST00000462548 ILDR2Q71H61 639 aa17.64■□□□□ 0.41
RPRD1B-203ENST00000462548 USP40Q9NVE5 1235 aa17.64■□□□□ 0.41
RPRD1B-203ENST00000462548 MYH1P12882 1939 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 GOLGA8BA8MQT2 603 aa17.63■□□□□ 0.41
RPRD1B-203ENST00000462548 NSUN7Q8NE18 718 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms