RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 SLC9C2Q5TAH2 1124 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 TSHZ3Q63HK5 1081 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.25■□□□□ 0.67
ERCC3-206ENST00000462306 TEX11Q8IYF3 940 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 ANKRD13AQ8IZ07 590 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.25■□□□□ 0.67
ERCC3-206ENST00000462306 SLC10A4Q96EP9 437 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 GPATCH3Q96I76 525 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 SALL3Q9BXA9 1300 aa19.25■□□□□ 0.67
ERCC3-206ENST00000462306 MAP3K9P80192 1104 aa19.24■□□□□ 0.67
ERCC3-206ENST00000462306 DCAF15Q66K64 600 aa19.24■□□□□ 0.67
ERCC3-206ENST00000462306 MIGA2Q7L4E1 593 aa19.24■□□□□ 0.67
ERCC3-206ENST00000462306 MIGA1Q8NAN2 632 aa19.24■□□□□ 0.67
ERCC3-206ENST00000462306 OTOFQ9HC10 1997 aa19.24■□□□□ 0.67
ERCC3-206ENST00000462306 TTC41PQ6P2S7 1318 aa19.24■□□□□ 0.67
ERCC3-206ENST00000462306 TCRBV5S4A2TA0A5A2 114 aa19.23■□□□□ 0.67
ERCC3-206ENST00000462306 SPRYD7Q5W111 196 aa19.23■□□□□ 0.67
ERCC3-206ENST00000462306 CSRNP1Q96S65 589 aa19.23■□□□□ 0.67
ERCC3-206ENST00000462306 OSBPL5Q9H0X9 879 aaPredicted RBP19.23■□□□□ 0.67
ERCC3-206ENST00000462306 COL2A1P02458 1487 aaPredicted RBP19.22■□□□□ 0.67
ERCC3-206ENST00000462306 FOXN1O15353 648 aa19.22■□□□□ 0.67
ERCC3-206ENST00000462306 MAP3K10Q02779 954 aa19.22■□□□□ 0.67
ERCC3-206ENST00000462306 VGLL4Q14135 290 aa19.22■□□□□ 0.67
ERCC3-206ENST00000462306 ZSCAN29Q8IWY8 852 aaPredicted RBP19.22■□□□□ 0.67
ERCC3-206ENST00000462306 PI4K2BQ8TCG2 481 aa19.22■□□□□ 0.67
ERCC3-206ENST00000462306 WRNIP1Q96S55 665 aa19.22■□□□□ 0.67
ERCC3-206ENST00000462306 RIOK1Q9BRS2 568 aaKnown RBP19.22■□□□□ 0.67
ERCC3-206ENST00000462306 ZNF341Q9BYN7 854 aa19.22■□□□□ 0.67
ERCC3-206ENST00000462306 ZNF112Q9UJU3 913 aa19.22■□□□□ 0.67
ERCC3-206ENST00000462306 ZNF532Q9HCE3 1301 aa19.22■□□□□ 0.67
ERCC3-206ENST00000462306 MX1P20591 662 aa19.21■□□□□ 0.67
ERCC3-206ENST00000462306 ADD2P35612 726 aa19.21■□□□□ 0.67
ERCC3-206ENST00000462306 MKRN3Q13064 507 aaKnown RBP19.21■□□□□ 0.67
ERCC3-206ENST00000462306 CERS3Q8IU89 383 aa19.21■□□□□ 0.67
ERCC3-206ENST00000462306 TGFBRAP1Q8WUH2 860 aa19.21■□□□□ 0.67
ERCC3-206ENST00000462306 WNK4Q96J92 1243 aa19.21■□□□□ 0.67
ERCC3-206ENST00000462306 ELP3Q9H9T3 547 aa19.21■□□□□ 0.67
ERCC3-206ENST00000462306 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.21■□□□□ 0.67
ERCC3-206ENST00000462306 ZBTB47Q9UFB7 747 aaPredicted RBP19.21■□□□□ 0.67
ERCC3-206ENST00000462306 AK9Q5TCS8 1911 aa19.21■□□□□ 0.67
ERCC3-206ENST00000462306 CDK5RAP2Q96SN8 1893 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 CHGBP05060 677 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 SLURP2P0DP57 97 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 ZBTB48P10074 688 aaPredicted RBP19.2■□□□□ 0.66
ERCC3-206ENST00000462306 INPP5BP32019 993 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 GJA5P36382 358 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 SLFNL1Q499Z3 407 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 MAPKAPK5Q8IW41 473 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 ZKSCAN4Q969J2 545 aaPredicted RBP19.2■□□□□ 0.66
ERCC3-206ENST00000462306 AIDAQ96BJ3 306 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.2■□□□□ 0.661e-6■□□□□ 10.8
ERCC3-206ENST00000462306 SNCAIPQ9Y6H5 919 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 FLT1P17948 1338 aa19.2■□□□□ 0.66
ERCC3-206ENST00000462306 FOCADQ5VW36 1801 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 MAGEB6P1A0A0J9YX57 407 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 PHF20L1A8MW92 1017 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 ERC2O15083 957 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 GLRX3O76003 335 aaKnown RBP19.19■□□□□ 0.66
ERCC3-206ENST00000462306 B4GALNT3Q6L9W6 998 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 REM2Q8IYK8 340 aaPredicted RBP19.19■□□□□ 0.66
ERCC3-206ENST00000462306 CNKSR2Q8WXI2 1034 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 BEGAINQ9BUH8 593 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 LNPKQ9C0E8 428 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 STAP2Q9UGK3 403 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 CSADQ9Y600 493 aa19.19■□□□□ 0.66
ERCC3-206ENST00000462306 NUCB1Q02818 461 aa19.18■□□□□ 0.66
ERCC3-206ENST00000462306 UBE3CQ15386 1083 aa19.18■□□□□ 0.66
ERCC3-206ENST00000462306 KBTBD3Q8NAB2 608 aa19.18■□□□□ 0.66
ERCC3-206ENST00000462306 OPTNQ96CV9 577 aa19.18■□□□□ 0.66
ERCC3-206ENST00000462306 SPDYE5A6NIY4 337 aa19.17■□□□□ 0.66
ERCC3-206ENST00000462306 TBC1D12O60347 775 aa19.17■□□□□ 0.66
ERCC3-206ENST00000462306 TM4SF4P48230 202 aa19.17■□□□□ 0.66
ERCC3-206ENST00000462306 PDE1AP54750 535 aa19.17■□□□□ 0.66
ERCC3-206ENST00000462306 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
ERCC3-206ENST00000462306 DHX36Q9H2U1 1008 aaKnown RBP19.17■□□□□ 0.66
ERCC3-206ENST00000462306 CA12O43570 354 aa19.16■□□□□ 0.66
ERCC3-206ENST00000462306 HSPA8P11142 646 aaKnown RBP19.16■□□□□ 0.66
ERCC3-206ENST00000462306 CTCFP49711 727 aaPredicted RBP19.16■□□□□ 0.66
ERCC3-206ENST00000462306 NOL9Q5SY16 702 aaKnown RBP19.16■□□□□ 0.66
ERCC3-206ENST00000462306 ZSCAN25Q6NSZ9 544 aa19.16■□□□□ 0.66
ERCC3-206ENST00000462306 ERO1BQ86YB8 467 aa19.16■□□□□ 0.66
ERCC3-206ENST00000462306 LCORLQ8N3X6 602 aa19.16■□□□□ 0.66
ERCC3-206ENST00000462306 RNF186Q9NXI6 227 aa19.16■□□□□ 0.66
ERCC3-206ENST00000462306 PALD1Q9ULE6 856 aa19.16■□□□□ 0.66
ERCC3-206ENST00000462306 LAMB1P07942 1786 aa19.16■□□□□ 0.66
ERCC3-206ENST00000462306 MYH7P12883 1935 aa19.15■□□□□ 0.66
ERCC3-206ENST00000462306 MANSC4A6NHS7 340 aaPredicted RBP19.15■□□□□ 0.66
ERCC3-206ENST00000462306 FAM196BA6NMK8 535 aa19.15■□□□□ 0.66
ERCC3-206ENST00000462306 USP5P45974 858 aa19.15■□□□□ 0.66
ERCC3-206ENST00000462306 METTL16Q86W50 562 aaKnown RBP19.15■□□□□ 0.66
ERCC3-206ENST00000462306 ARMT1Q9H993 441 aa19.15■□□□□ 0.66
ERCC3-206ENST00000462306 PI4KBQ9UBF8 816 aa19.15■□□□□ 0.66
ERCC3-206ENST00000462306 SAP30BPQ9UHR5 308 aaKnown RBP19.15■□□□□ 0.66
ERCC3-206ENST00000462306 SIPA1L1O43166 1804 aa19.15■□□□□ 0.66
ERCC3-206ENST00000462306 MBD4O95243 580 aa19.14■□□□□ 0.65
ERCC3-206ENST00000462306 SREBF2Q12772 1141 aa19.14■□□□□ 0.65
ERCC3-206ENST00000462306 OTUD5Q96G74 571 aa19.14■□□□□ 0.65
ERCC3-206ENST00000462306 MS4A4AQ96JQ5 239 aa19.14■□□□□ 0.65
ERCC3-206ENST00000462306 CRNKL1Q9BZJ0 848 aaKnown RBP19.14■□□□□ 0.65
ERCC3-206ENST00000462306 PUS7LQ9H0K6 701 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms