RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 TMC1Q8TDI8 760 aa8.48□□□□□ -1.05
CFHR3-204ENST00000461558 KRTAP4-5Q9BYR2 181 aa8.48□□□□□ -1.05
CFHR3-204ENST00000461558 MKNK2Q9HBH9 465 aa8.48□□□□□ -1.05
CFHR3-204ENST00000461558 MBNL3Q9NUK0 354 aaKnown RBP8.48□□□□□ -1.05
CFHR3-204ENST00000461558 ADAMTS6Q9UKP5 1117 aa8.48□□□□□ -1.05
CFHR3-204ENST00000461558 RNGTTO60942 597 aaKnown RBP8.47□□□□□ -1.05
CFHR3-204ENST00000461558 LEFTY1O75610 366 aa8.47□□□□□ -1.05
CFHR3-204ENST00000461558 CD96P40200 585 aa8.47□□□□□ -1.05
CFHR3-204ENST00000461558 IFI16Q16666 785 aaKnown RBP8.47□□□□□ -1.05
CFHR3-204ENST00000461558 DTHD1Q6ZMT9 781 aa8.47□□□□□ -1.05
CFHR3-204ENST00000461558 PDZD3Q86UT5 571 aa8.47□□□□□ -1.05
CFHR3-204ENST00000461558 EPS8L3Q8TE67 593 aaKnown RBP8.47□□□□□ -1.05
CFHR3-204ENST00000461558 CSRNP1Q96S65 589 aa8.47□□□□□ -1.05
CFHR3-204ENST00000461558 DUSP23Q9BVJ7 150 aa8.47□□□□□ -1.05
CFHR3-204ENST00000461558 TMEM39AQ9NV64 488 aa8.47□□□□□ -1.05
CFHR3-204ENST00000461558 GPN3Q9UHW5 284 aaPredicted RBP8.47□□□□□ -1.05
CFHR3-204ENST00000461558 PCOLCE2Q9UKZ9 415 aa8.47□□□□□ -1.05
CFHR3-204ENST00000461558 OXCT1P55809 520 aa8.46□□□□□ -1.06
CFHR3-204ENST00000461558 PPP2R3AQ06190 1150 aa8.46□□□□□ -1.06
CFHR3-204ENST00000461558 KRTAP19-4Q3LI73 84 aa8.46□□□□□ -1.06
CFHR3-204ENST00000461558 KCNB2Q92953 911 aa8.46□□□□□ -1.06
CFHR3-204ENST00000461558 CEACAM5P06731 702 aa8.45□□□□□ -1.06
CFHR3-204ENST00000461558 NEFMP07197 916 aa8.45□□□□□ -1.06
CFHR3-204ENST00000461558 FCGRTP55899 365 aa8.45□□□□□ -1.06
CFHR3-204ENST00000461558 ARHGAP27Q6ZUM4 889 aa8.45□□□□□ -1.06
CFHR3-204ENST00000461558 PI4K2BQ8TCG2 481 aa8.45□□□□□ -1.06
CFHR3-204ENST00000461558 ALKBH8Q96BT7 664 aaKnown RBP8.45□□□□□ -1.06
CFHR3-204ENST00000461558 HRASLS5Q96KN8 279 aa8.45□□□□□ -1.06
CFHR3-204ENST00000461558 AOC3Q16853 763 aa8.44□□□□□ -1.06
CFHR3-204ENST00000461558 TXNDC2Q86VQ3 553 aa8.44□□□□□ -1.06
CFHR3-204ENST00000461558 LRRN4CLQ8ND94 238 aa8.44□□□□□ -1.06
CFHR3-204ENST00000461558 ISL2Q96A47 359 aa8.44□□□□□ -1.06
CFHR3-204ENST00000461558 DMRTB1Q96MA1 342 aa8.44□□□□□ -1.06
CFHR3-204ENST00000461558 PLAGL2Q9UPG8 496 aa8.44□□□□□ -1.06
CFHR3-204ENST00000461558 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
CFHR3-204ENST00000461558 TMEM265A0A087WTH1 108 aa8.43□□□□□ -1.06
CFHR3-204ENST00000461558 SULF2Q8IWU5 870 aa8.43□□□□□ -1.06
CFHR3-204ENST00000461558 TOP6BLQ8N6T0 577 aa8.43□□□□□ -1.06
CFHR3-204ENST00000461558 STK35Q8TDR2 534 aa8.43□□□□□ -1.06
CFHR3-204ENST00000461558 FAM84AQ96KN4 292 aa8.43□□□□□ -1.06
CFHR3-204ENST00000461558 RBCK1Q9BYM8 510 aa8.43□□□□□ -1.06
CFHR3-204ENST00000461558 XRCC5P13010 732 aaKnown RBP8.42□□□□□ -1.06
CFHR3-204ENST00000461558 ERVK-24P63145 666 aa8.42□□□□□ -1.06
CFHR3-204ENST00000461558 ZC3H12AQ5D1E8 599 aaKnown RBP8.42□□□□□ -1.06
CFHR3-204ENST00000461558 PI16Q6UXB8 463 aa8.42□□□□□ -1.06
CFHR3-204ENST00000461558 BHLHE22Q8NFJ8 381 aaPredicted RBP8.42□□□□□ -1.06
CFHR3-204ENST00000461558 SSU72Q9NP77 194 aaKnown RBP8.42□□□□□ -1.06
CFHR3-204ENST00000461558 PPP4R2Q9NY27 417 aa8.42□□□□□ -1.06
CFHR3-204ENST00000461558 ITIH2P19823 946 aa8.41□□□□□ -1.06
CFHR3-204ENST00000461558 ANGEL2Q5VTE6 544 aaKnown RBP8.41□□□□□ -1.06
CFHR3-204ENST00000461558 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.41□□□□□ -1.06
CFHR3-204ENST00000461558 RNF214Q8ND24 703 aa8.41□□□□□ -1.06
CFHR3-204ENST00000461558 NLRP2Q9NX02 1062 aa8.41□□□□□ -1.06
CFHR3-204ENST00000461558 LRRC10BA6NIK2 292 aa8.4□□□□□ -1.06
CFHR3-204ENST00000461558 KRTAP9-7A8MTY7 169 aa8.4□□□□□ -1.06
CFHR3-204ENST00000461558 ARNTP27540 789 aa8.4□□□□□ -1.06
CFHR3-204ENST00000461558 MESP2Q0VG99 397 aa8.4□□□□□ -1.06
CFHR3-204ENST00000461558 MAP1SQ66K74 1059 aaPredicted RBP8.4□□□□□ -1.06
CFHR3-204ENST00000461558 BCO2Q9BYV7 579 aa8.4□□□□□ -1.06
CFHR3-204ENST00000461558 TNKS2Q9H2K2 1166 aa8.4□□□□□ -1.06
CFHR3-204ENST00000461558 SLC23A3Q6PIS1 610 aa8.39□□□□□ -1.07
CFHR3-204ENST00000461558 GPBAR1Q8TDU6 330 aa8.39□□□□□ -1.07
CFHR3-204ENST00000461558 HEXIM2Q96MH2 286 aaKnown RBP8.39□□□□□ -1.07
CFHR3-204ENST00000461558 SNX11Q9Y5W9 270 aa8.39□□□□□ -1.07
CFHR3-204ENST00000461558 NME2P22392 152 aa8.38□□□□□ -1.07
CFHR3-204ENST00000461558 ZNF252P-AS1Q0IIN9 211 aa8.38□□□□□ -1.07
CFHR3-204ENST00000461558 TOX2Q96NM4 488 aa8.38□□□□□ -1.07
CFHR3-204ENST00000461558 EMILIN2Q9BXX0 1053 aa8.38□□□□□ -1.07
CFHR3-204ENST00000461558 FAM53CQ9NYF3 392 aa8.38□□□□□ -1.07
CFHR3-204ENST00000461558 AKAP2Q9Y2D5 859 aa8.38□□□□□ -1.07
CFHR3-204ENST00000461558 FAM214BQ7L5A3 538 aa8.37□□□□□ -1.07
CFHR3-204ENST00000461558 ZSWIM9Q86XI8 627 aa8.37□□□□□ -1.07
CFHR3-204ENST00000461558 FLAD1Q8NFF5 587 aa8.37□□□□□ -1.07
CFHR3-204ENST00000461558 ACSBG1Q96GR2 724 aa8.37□□□□□ -1.07
CFHR3-204ENST00000461558 CACNA2D2Q9NY47 1150 aa8.37□□□□□ -1.07
CFHR3-204ENST00000461558 GTF2IRD1Q9UHL9 959 aa8.37□□□□□ -1.07
CFHR3-204ENST00000461558 TMC7Q7Z402 723 aa8.36□□□□□ -1.07
CFHR3-204ENST00000461558 PRDM7Q9NQW5 492 aa8.36□□□□□ -1.07
CFHR3-204ENST00000461558 IGF2BP3O00425 579 aaKnown RBP eCLIP8.35□□□□□ -1.07
CFHR3-204ENST00000461558 NTF4P34130 210 aa8.35□□□□□ -1.07
CFHR3-204ENST00000461558 RAP1GAPP47736 663 aa8.35□□□□□ -1.07
CFHR3-204ENST00000461558 KCNMB1Q16558 191 aa8.35□□□□□ -1.07
CFHR3-204ENST00000461558 MLANAQ16655 118 aa8.35□□□□□ -1.07
CFHR3-204ENST00000461558 NXPE4Q6UWF7 544 aa8.35□□□□□ -1.07
CFHR3-204ENST00000461558 SPACA3Q8IXA5 215 aa8.35□□□□□ -1.07
CFHR3-204ENST00000461558 CCER1Q8TC90 406 aaPredicted RBP8.35□□□□□ -1.07
CFHR3-204ENST00000461558 ASB11Q8WXH4 323 aa8.35□□□□□ -1.07
CFHR3-204ENST00000461558 CBX8Q9HC52 389 aa8.35□□□□□ -1.07
CFHR3-204ENST00000461558 PRDM10Q9NQV6 1147 aa8.35□□□□□ -1.07
CFHR3-204ENST00000461558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.35□□□□□ -1.07
CFHR3-204ENST00000461558 IKZF1Q13422 519 aa8.34□□□□□ -1.07
CFHR3-204ENST00000461558 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.34□□□□□ -1.07
CFHR3-204ENST00000461558 PPM1JQ5JR12 505 aa8.34□□□□□ -1.07
CFHR3-204ENST00000461558 MPRIPQ6WCQ1 1025 aa8.34□□□□□ -1.07
CFHR3-204ENST00000461558 C3orf58Q8NDZ4 430 aa8.34□□□□□ -1.07
CFHR3-204ENST00000461558 ZNF865P0CJ78 1059 aaPredicted RBP8.33□□□□□ -1.08
CFHR3-204ENST00000461558 UBE3DQ7Z6J8 389 aa8.33□□□□□ -1.08
CFHR3-204ENST00000461558 CILP2Q8IUL8 1156 aa8.33□□□□□ -1.08
CFHR3-204ENST00000461558 ZSCAN18Q8TBC5 510 aaPredicted RBP8.33□□□□□ -1.08
CFHR3-204ENST00000461558 NECAB3Q96P71 396 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms