RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 COL17A1Q9UMD9 1497 aaPredicted RBP7.92□□□□□ -1.14
UBA3-204ENST00000461522 USP17L7P0C7H9 530 aa7.91□□□□□ -1.14
UBA3-204ENST00000461522 ERVK-24P63145 666 aa7.91□□□□□ -1.14
UBA3-204ENST00000461522 CDK5R2Q13319 367 aa7.91□□□□□ -1.14
UBA3-204ENST00000461522 COL19A1Q14993 1142 aa7.91□□□□□ -1.14
UBA3-204ENST00000461522 NFXL1Q6ZNB6 911 aa7.91□□□□□ -1.14
UBA3-204ENST00000461522 GRIN3AQ8TCU5 1115 aa7.91□□□□□ -1.14
UBA3-204ENST00000461522 CBX8Q9HC52 389 aa7.91□□□□□ -1.14
UBA3-204ENST00000461522 TRIM37O94972 964 aa7.9□□□□□ -1.14
UBA3-204ENST00000461522 HCLS1P14317 486 aaPredicted RBP7.9□□□□□ -1.14
UBA3-204ENST00000461522 RASIP1Q5U651 963 aa7.9□□□□□ -1.14
UBA3-204ENST00000461522 SCARA3Q6AZY7 606 aa7.9□□□□□ -1.14
UBA3-204ENST00000461522 VSIG10LQ86VR7 867 aa7.9□□□□□ -1.14
UBA3-204ENST00000461522 RNF214Q8ND24 703 aa7.9□□□□□ -1.14
UBA3-204ENST00000461522 LRRC4CQ9HCJ2 640 aa7.9□□□□□ -1.14
UBA3-204ENST00000461522 BSDC1Q9NW68 430 aaPredicted RBP7.9□□□□□ -1.14
UBA3-204ENST00000461522 ZC3H7BQ9UGR2 993 aaKnown RBP7.9□□□□□ -1.14
UBA3-204ENST00000461522 PCOLCE2Q9UKZ9 415 aa7.9□□□□□ -1.14
UBA3-204ENST00000461522 RNGTTO60942 597 aaKnown RBP7.89□□□□□ -1.15
UBA3-204ENST00000461522 PRPF40AO75400 957 aaKnown RBP7.89□□□□□ -1.15
UBA3-204ENST00000461522 CELA3AP09093 270 aa7.89□□□□□ -1.15
UBA3-204ENST00000461522 GNA15P30679 374 aa7.89□□□□□ -1.15
UBA3-204ENST00000461522 IRAK1P51617 712 aa7.89□□□□□ -1.15
UBA3-204ENST00000461522 LLGL2Q6P1M3 1020 aa7.89□□□□□ -1.15
UBA3-204ENST00000461522 ISL2Q96A47 359 aa7.89□□□□□ -1.15
UBA3-204ENST00000461522 ACSBG1Q96GR2 724 aa7.89□□□□□ -1.15
UBA3-204ENST00000461522 ANGEL1Q9UNK9 670 aaKnown RBP7.89□□□□□ -1.15
UBA3-204ENST00000461522 FAM87AP0C7U9 286 aa7.88□□□□□ -1.15
UBA3-204ENST00000461522 PDIA4P13667 645 aaKnown RBP7.88□□□□□ -1.15
UBA3-204ENST00000461522 LRRC14Q15048 493 aa7.88□□□□□ -1.15
UBA3-204ENST00000461522 CYP27C1Q4G0S4 372 aa7.88□□□□□ -1.15
UBA3-204ENST00000461522 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
UBA3-204ENST00000461522 ANKRD33BA6NCL7 494 aa7.87□□□□□ -1.15
UBA3-204ENST00000461522 NTF4P34130 210 aa7.87□□□□□ -1.15
UBA3-204ENST00000461522 RING1Q06587 406 aa7.87□□□□□ -1.15
UBA3-204ENST00000461522 PCNX4Q63HM2 1172 aa7.87□□□□□ -1.15
UBA3-204ENST00000461522 CYP8B1Q9UNU6 501 aa7.87□□□□□ -1.15
UBA3-204ENST00000461522 EIF4BP23588 611 aaKnown RBP7.86□□□□□ -1.15
UBA3-204ENST00000461522 FGD1P98174 961 aa7.86□□□□□ -1.15
UBA3-204ENST00000461522 SV2BQ7L1I2 683 aa7.86□□□□□ -1.15
UBA3-204ENST00000461522 ABI1Q8IZP0 508 aa7.86□□□□□ -1.15
UBA3-204ENST00000461522 FBXL18Q96ME1 805 aa7.86□□□□□ -1.15
UBA3-204ENST00000461522 KRTAP9-2Q9BYQ4 174 aa7.86□□□□□ -1.15
UBA3-204ENST00000461522 ADGRE2Q9UHX3 823 aa7.86□□□□□ -1.15
UBA3-204ENST00000461522 LEFTY1O75610 366 aa7.85□□□□□ -1.15
UBA3-204ENST00000461522 EAPPQ56P03 285 aaPredicted RBP7.85□□□□□ -1.15
UBA3-204ENST00000461522 PPM1JQ5JR12 505 aa7.85□□□□□ -1.15
UBA3-204ENST00000461522 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.85□□□□□ -1.15
UBA3-204ENST00000461522 DUSP23Q9BVJ7 150 aa7.85□□□□□ -1.15
UBA3-204ENST00000461522 RNF19AQ9NV58 838 aa7.85□□□□□ -1.15
UBA3-204ENST00000461522 TTF2Q9UNY4 1162 aaKnown RBP7.85□□□□□ -1.15
UBA3-204ENST00000461522 AK5Q9Y6K8 562 aa7.85□□□□□ -1.15
UBA3-204ENST00000461522 DCDC2CA8MYV0 355 aa7.84□□□□□ -1.15
UBA3-204ENST00000461522 TAL1P17542 331 aaPredicted RBP7.84□□□□□ -1.15
UBA3-204ENST00000461522 DNAJC14Q6Y2X3 702 aaPredicted RBP7.84□□□□□ -1.15
UBA3-204ENST00000461522 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
UBA3-204ENST00000461522 SSU72Q9NP77 194 aaKnown RBP7.84□□□□□ -1.15
UBA3-204ENST00000461522 PCDHA4Q9UN74 947 aa7.84□□□□□ -1.15
UBA3-204ENST00000461522 CSADQ9Y600 493 aa7.84□□□□□ -1.15
UBA3-204ENST00000461522 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.83□□□□□ -1.16
UBA3-204ENST00000461522 FANCGO15287 622 aa7.83□□□□□ -1.16
UBA3-204ENST00000461522 ZBTB37Q5TC79 503 aa7.83□□□□□ -1.16
UBA3-204ENST00000461522 C12orf40Q86WS4 652 aa7.83□□□□□ -1.16
UBA3-204ENST00000461522 NPAS4Q8IUM7 802 aa7.83□□□□□ -1.16
UBA3-204ENST00000461522 PAK6Q9NQU5 681 aaPredicted RBP7.83□□□□□ -1.16
UBA3-204ENST00000461522 U3KQE9 123 aa7.83□□□□□ -1.16
UBA3-204ENST00000461522 PTPN11Q06124 597 aaPredicted RBP7.82□□□□□ -1.16
UBA3-204ENST00000461522 UBE3DQ7Z6J8 389 aa7.82□□□□□ -1.16
UBA3-204ENST00000461522 WFDC3Q8IUB2 231 aa7.82□□□□□ -1.16
UBA3-204ENST00000461522 TOP6BLQ8N6T0 577 aa7.82□□□□□ -1.16
UBA3-204ENST00000461522 FAM181AQ8N9Y4 354 aa7.82□□□□□ -1.16
UBA3-204ENST00000461522 FLCNQ8NFG4 579 aa7.82□□□□□ -1.16
UBA3-204ENST00000461522 BCL7CQ8WUZ0 217 aaPredicted RBP7.82□□□□□ -1.16
UBA3-204ENST00000461522 GAL3ST3Q96A11 431 aa7.82□□□□□ -1.16
UBA3-204ENST00000461522 MKNK2Q9HBH9 465 aa7.82□□□□□ -1.16
UBA3-204ENST00000461522 INPP5AQ14642 412 aa7.81□□□□□ -1.16
UBA3-204ENST00000461522 TTBK2Q6IQ55 1244 aa7.81□□□□□ -1.16
UBA3-204ENST00000461522 CBLL1Q75N03 491 aa7.81□□□□□ -1.16
UBA3-204ENST00000461522 TP53INP2Q8IXH6 220 aa7.81□□□□□ -1.16
UBA3-204ENST00000461522 PLD6Q8N2A8 252 aaKnown RBP7.81□□□□□ -1.16
UBA3-204ENST00000461522 NETO1Q8TDF5 533 aa7.81□□□□□ -1.16
UBA3-204ENST00000461522 MISP3Q96FF7 219 aa7.81□□□□□ -1.16
UBA3-204ENST00000461522 SLC5A6Q9Y289 635 aa7.81□□□□□ -1.16
UBA3-204ENST00000461522 KRTAP9-6A0A140TA67 174 aa7.8□□□□□ -1.16
UBA3-204ENST00000461522 OXCT1P55809 520 aa7.8□□□□□ -1.16
UBA3-204ENST00000461522 RPS26P62854 115 aaKnown RBP7.8□□□□□ -1.16
UBA3-204ENST00000461522 CCDC85BQ15834 202 aaPredicted RBP7.8□□□□□ -1.16
UBA3-204ENST00000461522 LRFN4Q6PJG9 635 aa7.8□□□□□ -1.16
UBA3-204ENST00000461522 CYFIP1Q7L576 1253 aa7.8□□□□□ -1.16
UBA3-204ENST00000461522 FAM214BQ7L5A3 538 aa7.8□□□□□ -1.16
UBA3-204ENST00000461522 STK11IPQ8N1F8 1099 aa7.8□□□□□ -1.16
UBA3-204ENST00000461522 AGBL5Q8NDL9 886 aa7.8□□□□□ -1.16
UBA3-204ENST00000461522 ELMO3Q96BJ8 720 aa7.8□□□□□ -1.16
UBA3-204ENST00000461522 PICK1Q9NRD5 415 aa7.8□□□□□ -1.16
UBA3-204ENST00000461522 PAX4O43316 350 aa7.79□□□□□ -1.16
UBA3-204ENST00000461522 KCT2Q8NC54 265 aa7.79□□□□□ -1.16
UBA3-204ENST00000461522 PLPPR2Q96GM1 343 aa7.79□□□□□ -1.16
UBA3-204ENST00000461522 HEXIM2Q96MH2 286 aaKnown RBP7.79□□□□□ -1.16
UBA3-204ENST00000461522 PRDM10Q9NQV6 1147 aa7.79□□□□□ -1.16
UBA3-204ENST00000461522 PARP2Q9UGN5 583 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms