RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 TBC1D8O95759 1140 aa10.87□□□□□ -0.67
HDAC9-220ENST00000461409 IFIT1P09914 478 aaKnown RBP10.87□□□□□ -0.67
HDAC9-220ENST00000461409 PTPN5P54829 565 aa10.87□□□□□ -0.67
HDAC9-220ENST00000461409 HDLBPQ00341 1268 aaKnown RBP10.87□□□□□ -0.67
HDAC9-220ENST00000461409 LRRC24Q50LG9 513 aa10.87□□□□□ -0.67
HDAC9-220ENST00000461409 DZIP1LQ8IYY4 767 aaKnown RBP10.87□□□□□ -0.67
HDAC9-220ENST00000461409 VGLL2Q8N8G2 317 aa10.87□□□□□ -0.67
HDAC9-220ENST00000461409 ZNF296Q8WUU4 475 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-220ENST00000461409 ZNF70Q9UC06 446 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-220ENST00000461409 HDAC5Q9UQL6 1122 aa10.87□□□□□ -0.67
HDAC9-220ENST00000461409 GPR25O00155 361 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-220ENST00000461409 CRKP46108 304 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 TNNI2P48788 182 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 CHAF1AQ13111 956 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-220ENST00000461409 NBPF12Q5TAG4 269 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-220ENST00000461409 ANKRD13AQ8IZ07 590 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 TEKT1Q969V4 418 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 WNK4Q96J92 1243 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 CLMNQ96JQ2 1002 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 CDHR5Q9HBB8 845 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 SUGT1Q9Y2Z0 365 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 ECM29Q5VYK3 1845 aa10.86□□□□□ -0.67
HDAC9-220ENST00000461409 MAST3O60307 1309 aa10.85□□□□□ -0.67
HDAC9-220ENST00000461409 FKTNO75072 461 aa10.85□□□□□ -0.67
HDAC9-220ENST00000461409 UBTFL1P0CB47 393 aaPredicted RBP10.85□□□□□ -0.67
HDAC9-220ENST00000461409 SLC5A1P13866 664 aa10.85□□□□□ -0.67
HDAC9-220ENST00000461409 OTUD7BQ6GQQ9 843 aa10.85□□□□□ -0.67
HDAC9-220ENST00000461409 KLHDC4Q8TBB5 520 aa10.85□□□□□ -0.67
HDAC9-220ENST00000461409 MRIQ9BWK5 157 aa10.85□□□□□ -0.67
HDAC9-220ENST00000461409 TDRD3Q9H7E2 651 aaKnown RBP10.85□□□□□ -0.67
HDAC9-220ENST00000461409 TMOD2Q9NZR1 351 aa10.85□□□□□ -0.67
HDAC9-220ENST00000461409 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
HDAC9-220ENST00000461409 FZD1Q9UP38 647 aa10.85□□□□□ -0.67
HDAC9-220ENST00000461409 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
HDAC9-220ENST00000461409 AOX1Q06278 1338 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 ARAP2Q8WZ64 1704 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 GOLGA8CPA6NN73 597 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 EYA2O00167 538 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 USP2O75604 605 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-220ENST00000461409 FGFR2P21802 821 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 BCAMP50895 628 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 TRMT2AQ8IZ69 625 aaKnown RBP10.84□□□□□ -0.67
HDAC9-220ENST00000461409 LPIN2Q92539 896 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 HOOK2Q96ED9 719 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 CDCA7LQ96GN5 454 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 ZDHHC15Q96MV8 337 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 API5Q9BZZ5 524 aaKnown RBP10.84□□□□□ -0.67
HDAC9-220ENST00000461409 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
HDAC9-220ENST00000461409 TCP10L2B9ZVM9 353 aa10.83□□□□□ -0.68
HDAC9-220ENST00000461409 CCER2I3L3R5 266 aa10.83□□□□□ -0.68
HDAC9-220ENST00000461409 CIAO1O76071 339 aa10.83□□□□□ -0.68
HDAC9-220ENST00000461409 FKBP1CQ5VVH2 108 aa10.83□□□□□ -0.68
HDAC9-220ENST00000461409 FBXO46Q6PJ61 603 aaPredicted RBP10.83□□□□□ -0.68
HDAC9-220ENST00000461409 WDR66Q8TBY9 1149 aa10.83□□□□□ -0.68
HDAC9-220ENST00000461409 TEPSINQ96N21 525 aa10.83□□□□□ -0.68
HDAC9-220ENST00000461409 TMEM39BQ9GZU3 492 aa10.83□□□□□ -0.68
HDAC9-220ENST00000461409 CSADQ9Y600 493 aa10.83□□□□□ -0.68
HDAC9-220ENST00000461409 TNRC18O15417 2968 aaPredicted RBP10.82□□□□□ -0.68
HDAC9-220ENST00000461409 RFX5P48382 616 aaPredicted RBP10.82□□□□□ -0.68
HDAC9-220ENST00000461409 SOX10P56693 466 aa10.82□□□□□ -0.68
HDAC9-220ENST00000461409 GRIK5Q16478 980 aa10.82□□□□□ -0.68
HDAC9-220ENST00000461409 HHIPL2Q6UWX4 724 aa10.82□□□□□ -0.68
HDAC9-220ENST00000461409 FAM83AQ86UY5 434 aa10.82□□□□□ -0.68
HDAC9-220ENST00000461409 LAPTM4BQ86VI4 370 aa10.82□□□□□ -0.68
HDAC9-220ENST00000461409 OPTNQ96CV9 577 aa10.82□□□□□ -0.68
HDAC9-220ENST00000461409 ELP3Q9H9T3 547 aa10.82□□□□□ -0.68
HDAC9-220ENST00000461409 GNL3LQ9NVN8 582 aaKnown RBP10.82□□□□□ -0.68
HDAC9-220ENST00000461409 CEP126Q9P2H0 1117 aa10.82□□□□□ -0.68
HDAC9-220ENST00000461409 NOB1Q9ULX3 412 aaKnown RBP10.82□□□□□ -0.68
HDAC9-220ENST00000461409 TESPA1A2RU30 521 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-220ENST00000461409 IGF2BP3O00425 579 aaKnown RBP eCLIP10.81□□□□□ -0.68
HDAC9-220ENST00000461409 IL15P40933 162 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-220ENST00000461409 VGLL4Q14135 290 aa10.81□□□□□ -0.68
HDAC9-220ENST00000461409 ATP2B3Q16720 1220 aa10.81□□□□□ -0.68
HDAC9-220ENST00000461409 THSD4Q6ZMP0 1018 aa10.81□□□□□ -0.68
HDAC9-220ENST00000461409 ATG9AQ7Z3C6 839 aa10.81□□□□□ -0.68
HDAC9-220ENST00000461409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.81□□□□□ -0.68
HDAC9-220ENST00000461409 WNT2BQ93097 391 aa10.81□□□□□ -0.68
HDAC9-220ENST00000461409 R3HDMLQ9H3Y0 253 aa10.81□□□□□ -0.68
HDAC9-220ENST00000461409 SEMA3EO15041 775 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 WDHD1O75717 1129 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-220ENST00000461409 GJA5P36382 358 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 GTF2A2P52657 109 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 PRSS12P56730 875 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 CRHR2Q13324 411 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 DCAF15Q66K64 600 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 APOBEC3HQ6NTF7 200 aaKnown RBP10.8□□□□□ -0.68
HDAC9-220ENST00000461409 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-220ENST00000461409 ARHGAP45Q92619 1136 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 ERO1AQ96HE7 468 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 SIL1Q9H173 461 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 FAM198AQ9UFP1 575 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 LRRFIP2Q9Y608 721 aaKnown RBP10.8□□□□□ -0.68
HDAC9-220ENST00000461409 HTTP42858 3142 aa10.8□□□□□ -0.68
HDAC9-220ENST00000461409 RPAP1Q9BWH6 1393 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-220ENST00000461409 IPO8O15397 1037 aaKnown RBP10.79□□□□□ -0.68
HDAC9-220ENST00000461409 GNAI3P08754 354 aa10.79□□□□□ -0.68
HDAC9-220ENST00000461409 RARSP54136 660 aaKnown RBP10.79□□□□□ -0.68
HDAC9-220ENST00000461409 CACNB3P54284 484 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms