RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 PDE8BO95263 885 aa16.96■□□□□ 0.31
SCAMP4-206ENST00000460767 GNAI2P04899 355 aa16.96■□□□□ 0.31
SCAMP4-206ENST00000460767 INPP5BP32019 993 aa16.96■□□□□ 0.31
SCAMP4-206ENST00000460767 IRF5Q13568 498 aa16.96■□□□□ 0.31
SCAMP4-206ENST00000460767 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
SCAMP4-206ENST00000460767 PANK1Q8TE04 598 aa16.96■□□□□ 0.31
SCAMP4-206ENST00000460767 FAM151AQ8WW52 585 aa16.96■□□□□ 0.31
SCAMP4-206ENST00000460767 SLC45A1Q9Y2W3 748 aa16.96■□□□□ 0.31
SCAMP4-206ENST00000460767 PTPRFP10586 1907 aa16.96■□□□□ 0.3
SCAMP4-206ENST00000460767 DOCK2Q92608 1830 aa16.96■□□□□ 0.3
SCAMP4-206ENST00000460767 SOX1O00570 391 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-206ENST00000460767 CXCL11O14625 94 aa16.95■□□□□ 0.3
SCAMP4-206ENST00000460767 ZBTB22O15209 634 aa16.95■□□□□ 0.3
SCAMP4-206ENST00000460767 VPS37DQ86XT2 251 aa16.95■□□□□ 0.3
SCAMP4-206ENST00000460767 PAK6Q9NQU5 681 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-206ENST00000460767 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
SCAMP4-206ENST00000460767 BMP8BP34820 402 aa16.94■□□□□ 0.3
SCAMP4-206ENST00000460767 POLA2Q14181 598 aa16.94■□□□□ 0.3
SCAMP4-206ENST00000460767 GPAT2Q6NUI2 795 aa16.94■□□□□ 0.3
SCAMP4-206ENST00000460767 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-206ENST00000460767 CRISPLD2Q9H0B8 497 aa16.94■□□□□ 0.3
SCAMP4-206ENST00000460767 UNC93B1Q9H1C4 597 aa16.94■□□□□ 0.3
SCAMP4-206ENST00000460767 ATRNL1Q5VV63 1379 aa16.93■□□□□ 0.3
SCAMP4-206ENST00000460767 EVI5O60447 810 aa16.93■□□□□ 0.3
SCAMP4-206ENST00000460767 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
SCAMP4-206ENST00000460767 SSH3Q8TE77 659 aa16.93■□□□□ 0.3
SCAMP4-206ENST00000460767 PA2G4Q9UQ80 394 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-206ENST00000460767 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
SCAMP4-206ENST00000460767 ADCY3O60266 1144 aa16.92■□□□□ 0.3
SCAMP4-206ENST00000460767 MS4A1P11836 297 aa16.92■□□□□ 0.3
SCAMP4-206ENST00000460767 CHAF1AQ13111 956 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-206ENST00000460767 MVPQ14764 893 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-206ENST00000460767 GDF15Q99988 308 aa16.92■□□□□ 0.3
SCAMP4-206ENST00000460767 BIN2Q9UBW5 565 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-206ENST00000460767 GABRQQ9UN88 632 aa16.92■□□□□ 0.3
SCAMP4-206ENST00000460767 PHIPQ8WWQ0 1821 aa16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 DOCK1Q14185 1865 aa16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 A0A0G2JLL6 359 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 C20orf194Q5TEA3 1177 aa16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 MIGA2Q7L4E1 593 aa16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 FASTKD5Q7L8L6 764 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 PRRT2Q7Z6L0 340 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 ITPRIPQ8IWB1 547 aa16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 ANKLE1Q8NAG6 615 aa16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 LRCH3Q96II8 777 aa16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 ZBTB40Q9NUA8 1239 aa16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 IQSEC3Q9UPP2 1182 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-206ENST00000460767 INHAP05111 366 aa16.9■□□□□ 0.3
SCAMP4-206ENST00000460767 CYP2C8P10632 490 aa16.9■□□□□ 0.3
SCAMP4-206ENST00000460767 FLT3LGP49771 235 aa16.9■□□□□ 0.3
SCAMP4-206ENST00000460767 ATP8B2P98198 1209 aa16.9■□□□□ 0.3
SCAMP4-206ENST00000460767 METTL24Q5JXM2 366 aa16.9■□□□□ 0.3
SCAMP4-206ENST00000460767 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
SCAMP4-206ENST00000460767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.9■□□□□ 0.3
SCAMP4-206ENST00000460767 RFX7Q2KHR2 1363 aa16.89■□□□□ 0.3
SCAMP4-206ENST00000460767 PUM3Q15397 648 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-206ENST00000460767 LRIT3Q3SXY7 679 aa16.89■□□□□ 0.29
SCAMP4-206ENST00000460767 CEP85Q6P2H3 762 aa16.89■□□□□ 0.29
SCAMP4-206ENST00000460767 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-206ENST00000460767 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
SCAMP4-206ENST00000460767 LOC285556D6RIA3 1793 aa16.88■□□□□ 0.29
SCAMP4-206ENST00000460767 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-206ENST00000460767 BCAMP50895 628 aa16.88■□□□□ 0.29
SCAMP4-206ENST00000460767 MAP3K10Q02779 954 aa16.88■□□□□ 0.29
SCAMP4-206ENST00000460767 SCYL3Q8IZE3 742 aa16.88■□□□□ 0.29
SCAMP4-206ENST00000460767 LPIN2Q92539 896 aa16.88■□□□□ 0.29
SCAMP4-206ENST00000460767 SIL1Q9H173 461 aa16.88■□□□□ 0.29
SCAMP4-206ENST00000460767 DDX19BQ9UMR2 479 aa16.88■□□□□ 0.29
SCAMP4-206ENST00000460767 AK9Q5TCS8 1911 aa16.88■□□□□ 0.29
SCAMP4-206ENST00000460767 PHF20L1A8MW92 1017 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 IFIT1P09914 478 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 NFIAQ12857 509 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 CDC42EP5Q6NZY7 148 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 NECAB2Q7Z6G3 386 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 DEFB118Q96PH6 123 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 C1orf115Q9H7X2 142 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 FAM198AQ9UFP1 575 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 STAP2Q9UGK3 403 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 STXBP5LQ9Y2K9 1186 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 COG6Q9Y2V7 657 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 AFG3L2Q9Y4W6 797 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 SALL1Q9NSC2 1324 aa16.87■□□□□ 0.29
SCAMP4-206ENST00000460767 TNPO2O14787 897 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-206ENST00000460767 TFRCP02786 760 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-206ENST00000460767 ELNP15502 786 aa16.86■□□□□ 0.29
SCAMP4-206ENST00000460767 PTPRAP18433 802 aa16.86■□□□□ 0.29
SCAMP4-206ENST00000460767 SIRT2Q8IXJ6 389 aa16.86■□□□□ 0.29
SCAMP4-206ENST00000460767 IDI2Q9BXS1 227 aa16.86■□□□□ 0.29
SCAMP4-206ENST00000460767 DDX60LQ5H9U9 1706 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-206ENST00000460767 ENTPD3O75355 529 aa16.85■□□□□ 0.29
SCAMP4-206ENST00000460767 TCP10Q12799 353 aa16.85■□□□□ 0.29
SCAMP4-206ENST00000460767 FAM110CQ1W6H9 321 aa16.85■□□□□ 0.29
SCAMP4-206ENST00000460767 PAWRQ96IZ0 340 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-206ENST00000460767 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-206ENST00000460767 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.85■□□□□ 0.294e-6■■■□□ 15.2
SCAMP4-206ENST00000460767 CEP126Q9P2H0 1117 aa16.85■□□□□ 0.29
SCAMP4-206ENST00000460767 COL6A3P12111 3177 aa16.84■□□□□ 0.29
SCAMP4-206ENST00000460767 LAMA3Q16787 3333 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms