RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 MXD3Q9BW11 206 aa9.13□□□□□ -0.95
ABCA4-202ENST00000460514 HELLSQ9NRZ9 838 aa9.13□□□□□ -0.95
ABCA4-202ENST00000460514 CNOT7Q9UIV1 285 aaKnown RBP9.13□□□□□ -0.95
ABCA4-202ENST00000460514 GAKO14976 1311 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 RAD50Q92878 1312 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 MYO1BO43795 1136 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 DDNO94850 711 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-202ENST00000460514 CHMLP26374 656 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 CRKP46108 304 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 SCNN1DP51172 638 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 ZNF280AP59817 542 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-202ENST00000460514 DLGAP5Q15398 846 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 ZMYM1Q5SVZ6 1142 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 MICALL2Q8IY33 904 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 MTMR14Q8NCE2 650 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 AIDAQ96BJ3 306 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 ZDHHC15Q96MV8 337 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 GPRC5DQ9NZD1 345 aa9.12□□□□□ -0.95
ABCA4-202ENST00000460514 ZNF646O15015 1829 aaPredicted RBP9.12□□□□□ -0.95
ABCA4-202ENST00000460514 MYH2Q9UKX2 1941 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 GPR75-ASB3A0A0A6YYF3 556 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 MAGEB6P1A0A0J9YX57 407 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 TCRBV5S4A2TA0A5A2 114 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 GNAT2P19087 354 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 DIXDC1Q155Q3 683 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 GRIK5Q16478 980 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 CFAP100Q494V2 611 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 MCMDC2Q4G0Z9 681 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 CWC27Q6UX04 472 aaKnown RBP9.11□□□□□ -0.95
ABCA4-202ENST00000460514 KIAA1211Q6ZU35 1233 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 DDRGK1Q96HY6 314 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 MYOZ2Q9NPC6 264 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 ADARB2Q9NS39 739 aaKnown RBP9.11□□□□□ -0.95
ABCA4-202ENST00000460514 TMOD2Q9NZR1 351 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 HACL1Q9UJ83 578 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 DAGLAQ9Y4D2 1042 aa9.11□□□□□ -0.95
ABCA4-202ENST00000460514 MYO5AQ9Y4I1 1855 aaKnown RBP9.11□□□□□ -0.95
ABCA4-202ENST00000460514 BTDP43251 543 aa9.1□□□□□ -0.95
ABCA4-202ENST00000460514 PPP4CP60510 307 aa9.1□□□□□ -0.95
ABCA4-202ENST00000460514 NMIQ13287 307 aaPredicted RBP9.1□□□□□ -0.95
ABCA4-202ENST00000460514 KIF4BQ2VIQ3 1234 aa9.1□□□□□ -0.95
ABCA4-202ENST00000460514 KCTD12Q96CX2 325 aaKnown RBP9.1□□□□□ -0.95
ABCA4-202ENST00000460514 CRNKL1Q9BZJ0 848 aaKnown RBP9.1□□□□□ -0.95
ABCA4-202ENST00000460514 AATFQ9NY61 560 aaKnown RBP eCLIP9.1□□□□□ -0.95
ABCA4-202ENST00000460514 RPAP1Q9BWH6 1393 aaPredicted RBP9.1□□□□□ -0.95
ABCA4-202ENST00000460514 SCN4AP35499 1836 aa9.1□□□□□ -0.95
ABCA4-202ENST00000460514 CCDC171Q6TFL3 1326 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 WDR90Q96KV7 1748 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 A0A0D9SFI3 127 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 GPAA1O43292 621 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 REC8O95072 547 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 MBD4O95243 580 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 TNFAIP1Q13829 316 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 USP50Q70EL3 339 aaPredicted RBP9.09□□□□□ -0.95
ABCA4-202ENST00000460514 PNMA8AQ86V59 439 aaPredicted RBP9.09□□□□□ -0.95
ABCA4-202ENST00000460514 MIGA1Q8NAN2 632 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 ZNF384Q8TF68 577 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 OSBP2Q969R2 916 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 FAM227BQ96M60 508 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 ESYT1Q9BSJ8 1104 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 NACAP1Q9BZK3 213 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 USP40Q9NVE5 1235 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 SRCAPQ6ZRS2 3230 aa9.09□□□□□ -0.95
ABCA4-202ENST00000460514 M0R2C6 588 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 WNT10BO00744 389 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 SGSM2O43147 1006 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 VEGFAP15692 232 aaPredicted RBP9.08□□□□□ -0.96
ABCA4-202ENST00000460514 EPHX2P34913 555 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 EPS15P42566 896 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 USP5P45974 858 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 TNNI2P48788 182 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 TBC1D10BQ4KMP7 808 aaPredicted RBP9.08□□□□□ -0.96
ABCA4-202ENST00000460514 RBM26Q5T8P6 1007 aaKnown RBP9.08□□□□□ -0.96
ABCA4-202ENST00000460514 FKBP1CQ5VVH2 108 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 APOBEC3HQ6NTF7 200 aaKnown RBP9.08□□□□□ -0.96
ABCA4-202ENST00000460514 ADGRA1Q86SQ6 560 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 APOBEC3FQ8IUX4 373 aaKnown RBP9.08□□□□□ -0.96
ABCA4-202ENST00000460514 AMOTL1Q8IY63 956 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 TEX11Q8IYF3 940 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 RIOK1Q9BRS2 568 aaKnown RBP9.08□□□□□ -0.96
ABCA4-202ENST00000460514 MFRPQ9BY79 579 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 PUS7LQ9H0K6 701 aaKnown RBP9.08□□□□□ -0.96
ABCA4-202ENST00000460514 ATP8A2Q9NTI2 1148 aa9.08□□□□□ -0.96
ABCA4-202ENST00000460514 PATL2C9JE40 543 aaKnown RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 EPB41L2O43491 1005 aaKnown RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 APPP05067 770 aa9.07□□□□□ -0.96
ABCA4-202ENST00000460514 DYNLL1P63167 89 aaKnown RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 CDC42EP5Q6NZY7 148 aa9.07□□□□□ -0.96
ABCA4-202ENST00000460514 GIMAP6Q6P9H5 292 aa9.07□□□□□ -0.96
ABCA4-202ENST00000460514 SAMD7Q7Z3H4 446 aa9.07□□□□□ -0.96
ABCA4-202ENST00000460514 LCORLQ8N3X6 602 aa9.07□□□□□ -0.96
ABCA4-202ENST00000460514 ZC3H15Q8WU90 426 aaKnown RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 ZBED3Q96IU2 234 aaPredicted RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 PRMT6Q96LA8 375 aaPredicted RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 STRBPQ96SI9 672 aaKnown RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 SEC62Q99442 399 aaKnown RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 DSCC1Q9BVC3 393 aa9.07□□□□□ -0.96
ABCA4-202ENST00000460514 TAF1DQ9H5J8 278 aaPredicted RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 TDRD3Q9H7E2 651 aaKnown RBP9.07□□□□□ -0.96
ABCA4-202ENST00000460514 ARMT1Q9H993 441 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms