RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 TRIM47Q96LD4 638 aa18.2■□□□□ 0.5
SLC6A1-203ENST00000460480 HMG20BQ9P0W2 317 aa18.2■□□□□ 0.5
SLC6A1-203ENST00000460480 ABCF2Q9UG63 623 aa18.2■□□□□ 0.5
SLC6A1-203ENST00000460480 CPA4Q9UI42 421 aa18.2■□□□□ 0.5
SLC6A1-203ENST00000460480 AFG3L2Q9Y4W6 797 aa18.2■□□□□ 0.5
SLC6A1-203ENST00000460480 ZSWIM8A7E2V4 1837 aa18.2■□□□□ 0.5
SLC6A1-203ENST00000460480 AK9Q5TCS8 1911 aa18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 NPM3O75607 178 aaKnown RBP18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 PTPRAP18433 802 aa18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 MECOMQ03112 1051 aa18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 MVPQ14764 893 aaKnown RBP18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 KIF22Q14807 665 aa18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 SPTY2D1Q68D10 685 aaPredicted RBP18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 ATF7IPQ6VMQ6 1270 aa18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 SCYL3Q8IZE3 742 aa18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 SH3TC2Q8TF17 1288 aa18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 TMEM106CQ9BVX2 250 aa18.19■□□□□ 0.5
SLC6A1-203ENST00000460480 A0A0G2JLL6 359 aaPredicted RBP18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 IPO8O15397 1037 aaKnown RBP18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 BCRP11274 1271 aa18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 BTDP43251 543 aa18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 PSMC4P43686 418 aa18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 PRRT2Q7Z6L0 340 aaPredicted RBP18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 SLF2Q8IX21 1173 aa18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 ZHX2Q9Y6X8 837 aa18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 MROH7-TTC4A0A0A0MT08 1334 aa18.18■□□□□ 0.5
SLC6A1-203ENST00000460480 TBC1D12O60347 775 aa18.17■□□□□ 0.5
SLC6A1-203ENST00000460480 CTNND1O60716 968 aaKnown RBP18.17■□□□□ 0.5
SLC6A1-203ENST00000460480 GNAI2P04899 355 aa18.17■□□□□ 0.5
SLC6A1-203ENST00000460480 OSBPP22059 807 aa18.17■□□□□ 0.5
SLC6A1-203ENST00000460480 PI16Q6UXB8 463 aa18.17■□□□□ 0.5
SLC6A1-203ENST00000460480 NSUN4Q96CB9 384 aaKnown RBP18.17■□□□□ 0.5
SLC6A1-203ENST00000460480 SRRDQ9UH36 339 aa18.17■□□□□ 0.5
SLC6A1-203ENST00000460480 ARID4AP29374 1257 aaPredicted RBP18.16■□□□□ 0.5
SLC6A1-203ENST00000460480 TBC1D9Q6ZT07 1266 aa18.16■□□□□ 0.5
SLC6A1-203ENST00000460480 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
SLC6A1-203ENST00000460480 SPATA5Q8NB90 893 aa18.16■□□□□ 0.5
SLC6A1-203ENST00000460480 NEUROD6Q96NK8 337 aa18.16■□□□□ 0.5
SLC6A1-203ENST00000460480 CEP290O15078 2479 aa18.15■□□□□ 0.5
SLC6A1-203ENST00000460480 MAP4K4O95819 1239 aaPredicted RBP18.15■□□□□ 0.5
SLC6A1-203ENST00000460480 CYP2C8P10632 490 aa18.15■□□□□ 0.5
SLC6A1-203ENST00000460480 FASTKD5Q7L8L6 764 aaKnown RBP18.15■□□□□ 0.5
SLC6A1-203ENST00000460480 ZSCAN29Q8IWY8 852 aaPredicted RBP18.15■□□□□ 0.5
SLC6A1-203ENST00000460480 RANBP2P49792 3224 aaKnown RBP18.14■□□□□ 0.49
SLC6A1-203ENST00000460480 POLA2Q14181 598 aa18.14■□□□□ 0.49
SLC6A1-203ENST00000460480 SLC4A8Q2Y0W8 1093 aa18.14■□□□□ 0.49
SLC6A1-203ENST00000460480 CLUAP1Q96AJ1 413 aa18.14■□□□□ 0.49
SLC6A1-203ENST00000460480 GCC1Q96CN9 775 aa18.14■□□□□ 0.49
SLC6A1-203ENST00000460480 SLC45A1Q9Y2W3 748 aa18.14■□□□□ 0.49
SLC6A1-203ENST00000460480 FMNL1O95466 1100 aaPredicted RBP18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 LDHCP07864 332 aa18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 HOXD10P28358 340 aa18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 MCAMP43121 646 aa18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 PICALMQ13492 652 aa18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 MTFR1Q15390 333 aa18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 HABP4Q5JVS0 413 aaKnown RBP18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 FRAT1Q92837 279 aaPredicted RBP18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 PARK7Q99497 189 aaKnown RBP18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 GPR108Q9NPR9 543 aa18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 PICK1Q9NRD5 415 aa18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.13■□□□□ 0.49
SLC6A1-203ENST00000460480 ECM2O94769 699 aaPredicted RBP18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 MYCP01106 439 aaPredicted RBP18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 GRK4P32298 578 aa18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 G3BP1Q13283 466 aaKnown RBP eCLIP18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 RRP1BQ14684 758 aaKnown RBP18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 TMEM57Q8N5G2 664 aa18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 SSH3Q8TE77 659 aa18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 SHISA4Q96DD7 197 aa18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 PHIPQ8WWQ0 1821 aa18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 DOCK2Q92608 1830 aa18.12■□□□□ 0.49
SLC6A1-203ENST00000460480 GSTO1P78417 241 aa18.11■□□□□ 0.49
SLC6A1-203ENST00000460480 ATP8B2P98198 1209 aa18.11■□□□□ 0.49
SLC6A1-203ENST00000460480 UBE2Q1Q7Z7E8 422 aa18.11■□□□□ 0.49
SLC6A1-203ENST00000460480 CCDC84Q86UT8 332 aaPredicted RBP18.11■□□□□ 0.49
SLC6A1-203ENST00000460480 GABRQQ9UN88 632 aa18.11■□□□□ 0.49
SLC6A1-203ENST00000460480 COL2A1P02458 1487 aaPredicted RBP18.1■□□□□ 0.49
SLC6A1-203ENST00000460480 FAM196BA6NMK8 535 aa18.1■□□□□ 0.49
SLC6A1-203ENST00000460480 UQCRFS1P1P0C7P4 283 aa18.1■□□□□ 0.49
SLC6A1-203ENST00000460480 GORABQ5T7V8 394 aa18.1■□□□□ 0.49
SLC6A1-203ENST00000460480 OSBPL5Q9H0X9 879 aaPredicted RBP18.1■□□□□ 0.49
SLC6A1-203ENST00000460480 PTPRFP10586 1907 aa18.1■□□□□ 0.49
SLC6A1-203ENST00000460480 MYPNQ86TC9 1320 aa18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 GJB1P08034 283 aa18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 PPP4CP60510 307 aa18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 PRKCZQ05513 592 aa18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 GADL1Q6ZQY3 521 aa18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 RAET1EQ8TD07 263 aa18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 AGTPBP1Q9UPW5 1226 aa18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
SLC6A1-203ENST00000460480 TRIM75PA6NK02 468 aa18.08■□□□□ 0.48
SLC6A1-203ENST00000460480 ZBTB7BO15156 539 aaPredicted RBP18.08■□□□□ 0.48
SLC6A1-203ENST00000460480 CAP2P40123 477 aa18.08■□□□□ 0.48
SLC6A1-203ENST00000460480 GJA8P48165 433 aa18.08■□□□□ 0.48
SLC6A1-203ENST00000460480 FCGRTP55899 365 aa18.08■□□□□ 0.48
SLC6A1-203ENST00000460480 TNNI3KQ59H18 835 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms