RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 EYA3Q99504 573 aa9.45□□□□□ -0.9
SFPQ-202ENST00000460428 GPHNQ9NQX3 736 aaPredicted RBP9.45□□□□□ -0.9
SFPQ-202ENST00000460428 AATFQ9NY61 560 aaKnown RBP eCLIP9.45□□□□□ -0.9
SFPQ-202ENST00000460428 ROBO3Q96MS0 1386 aa9.45□□□□□ -0.9
SFPQ-202ENST00000460428 C10orf71Q711Q0 1435 aa9.45□□□□□ -0.9
SFPQ-202ENST00000460428 PTPDC1A2A3K4 754 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 USP17L12C9JPN9 530 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 USP17L21D6R901 530 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 C6orf229H3BNL8 230 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 KDM4AO75164 1064 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 PLCG2P16885 1265 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 DEKP35659 375 aaKnown RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 CCT2P78371 535 aaKnown RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 RESTQ13127 1097 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 SF3B2Q13435 895 aaKnown RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 SART3Q15020 963 aaKnown RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 GRIK5Q16478 980 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 C12orf60Q5U649 245 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 DPP8Q6V1X1 898 aaPredicted RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 FAM184AQ8NB25 1140 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 ANKS1AQ92625 1134 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 ESR2Q92731 530 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 GPR101Q96P66 508 aaPredicted RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 ZC3H12CQ9C0D7 883 aaKnown RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 TMX4Q9H1E5 349 aaPredicted RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 FAM217BQ9NTX9 383 aaPredicted RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 DDX49Q9Y6V7 483 aaKnown RBP9.44□□□□□ -0.9
SFPQ-202ENST00000460428 ELP1O95163 1332 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 STK36Q9NRP7 1315 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 LAMB1P07942 1786 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 DLEC1Q9Y238 1755 aa9.44□□□□□ -0.9
SFPQ-202ENST00000460428 MINDY4BA8MYZ0 360 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 IFIT3O14879 490 aaKnown RBP9.43□□□□□ -0.9
SFPQ-202ENST00000460428 ZBTB43O43298 467 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 CDKL5O76039 1030 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 SLC3A2P08195 630 aaKnown RBP9.43□□□□□ -0.9
SFPQ-202ENST00000460428 RHBDL3P58872 404 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 ZNF445P59923 1031 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 HDLBPQ00341 1268 aaKnown RBP9.43□□□□□ -0.9
SFPQ-202ENST00000460428 TMEM67Q5HYA8 995 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 MFSD14BQ5SR56 506 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 HHIPL2Q6UWX4 724 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 CDC37L1Q7L3B6 337 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 USP48Q86UV5 1035 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 GPT2Q8TD30 523 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 INCENPQ9NQS7 918 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 TCP11L1Q9NUJ3 509 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 TAOK2Q9UL54 1235 aa9.43□□□□□ -0.9
SFPQ-202ENST00000460428 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 DDX60LQ5H9U9 1706 aaKnown RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 CCDC196A0A1B0GTZ2 297 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 ERICH2A1L162 156 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 VPS37CA5D8V6 355 aaPredicted RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 GOLGA8BA8MQT2 603 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 IFNAR1P17181 557 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 METAP2P50579 478 aaKnown RBP eCLIP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 UBE2HP62256 183 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 PDE4BQ07343 736 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 WTAPQ15007 396 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 MSL1Q68DK7 614 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 CPLX2Q6PUV4 134 aaKnown RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 FBXO18Q8NFZ0 1043 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 MAP3K14Q99558 947 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 NOL10Q9BSC4 688 aaKnown RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 SCAND2PQ9GZW5 306 aaPredicted RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 VPS33BQ9H267 617 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 SENP2Q9HC62 589 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 NCOA5Q9HCD5 579 aaKnown RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 SLC12A7Q9Y666 1083 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 BAZ2AQ9UIF9 1905 aaKnown RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 MYH2Q9UKX2 1941 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 ZNF646O15015 1829 aaPredicted RBP9.42□□□□□ -0.9
SFPQ-202ENST00000460428 SLX4Q8IY92 1834 aa9.42□□□□□ -0.9
SFPQ-202ENST00000460428 CDK5RAP2Q96SN8 1893 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 FOCADQ5VW36 1801 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 CCDC69A6NI79 296 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 H3BQV1 296 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 NPM3O75607 178 aaKnown RBP9.41□□□□□ -0.9
SFPQ-202ENST00000460428 CDC27P30260 824 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 GTF2IP78347 998 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 KRT85P78386 507 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 DNM1Q05193 864 aaKnown RBP9.41□□□□□ -0.9
SFPQ-202ENST00000460428 DIXDC1Q155Q3 683 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 CCDC178Q5BJE1 867 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 IFFO2Q5TF58 517 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 STRIP1Q5VSL9 837 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
SFPQ-202ENST00000460428 SYNE3Q6ZMZ3 975 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 IQCA1Q86XH1 822 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 SUPT20HQ8NEM7 779 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 SH3RF3Q8TEJ3 882 aaPredicted RBP9.41□□□□□ -0.9
SFPQ-202ENST00000460428 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
SFPQ-202ENST00000460428 ZNF622Q969S3 477 aaKnown RBP eCLIP9.41□□□□□ -0.93e-18■■■■■ 30.8
SFPQ-202ENST00000460428 DDX11Q96FC9 970 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 CHAMP1Q96JM3 812 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 ORC3Q9UBD5 711 aaPredicted RBP9.41□□□□□ -0.9
SFPQ-202ENST00000460428 CNPY2Q9Y2B0 182 aa9.41□□□□□ -0.9
SFPQ-202ENST00000460428 TCHHQ07283 1943 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms