RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SMARCC1Q92922 1105 aaPredicted RBP17.73■□□□□ 0.43
LMNB1-203ENST00000460265 KRT23Q9C075 422 aa17.73■□□□□ 0.43
LMNB1-203ENST00000460265 AATFQ9NY61 560 aaKnown RBP eCLIP17.73■□□□□ 0.43
LMNB1-203ENST00000460265 NEDD4P46934 1319 aa17.72■□□□□ 0.43
LMNB1-203ENST00000460265 SERPINC1P01008 464 aa17.72■□□□□ 0.43
LMNB1-203ENST00000460265 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.72■□□□□ 0.43
LMNB1-203ENST00000460265 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
LMNB1-203ENST00000460265 ZNF34Q8IZ26 560 aa17.72■□□□□ 0.43
LMNB1-203ENST00000460265 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
LMNB1-203ENST00000460265 BAZ2BQ9UIF8 2168 aaKnown RBP17.72■□□□□ 0.43
LMNB1-203ENST00000460265 AP5Z1O43299 807 aa17.71■□□□□ 0.43
LMNB1-203ENST00000460265 CDC27P30260 824 aa17.71■□□□□ 0.43
LMNB1-203ENST00000460265 DZIP1Q86YF9 867 aaKnown RBP17.71■□□□□ 0.43
LMNB1-203ENST00000460265 CNNM3Q8NE01 707 aa17.71■□□□□ 0.43
LMNB1-203ENST00000460265 NOL10Q9BSC4 688 aaKnown RBP17.71■□□□□ 0.43
LMNB1-203ENST00000460265 BTBD18B2RXH4 712 aa17.71■□□□□ 0.43
LMNB1-203ENST00000460265 ZNF202O95125 648 aa17.71■□□□□ 0.43
LMNB1-203ENST00000460265 IQCA1Q86XH1 822 aa17.71■□□□□ 0.43
LMNB1-203ENST00000460265 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
LMNB1-203ENST00000460265 RFC4P35249 363 aa17.71■□□□□ 0.43
LMNB1-203ENST00000460265 SECISBP2LQ93073 1101 aaKnown RBP17.71■□□□□ 0.43
LMNB1-203ENST00000460265 TOM1O60784 492 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 XBP1P17861 261 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 HNRNPH2P55795 449 aaKnown RBP17.7■□□□□ 0.42
LMNB1-203ENST00000460265 INTS5Q6P9B9 1019 aaKnown RBP17.7■□□□□ 0.42
LMNB1-203ENST00000460265 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 ZNF397Q8NF99 534 aaPredicted RBP17.7■□□□□ 0.42
LMNB1-203ENST00000460265 ST7Q9NRC1 585 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 RGS22Q8NE09 1264 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 ESR2Q92731 530 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 TMEM87BQ96K49 555 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 CNNM2Q9H8M5 875 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 USP5P45974 858 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 TEX2Q8IWB9 1127 aa17.7■□□□□ 0.42
LMNB1-203ENST00000460265 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
LMNB1-203ENST00000460265 CDCA7Q9BWT1 371 aaPredicted RBP17.7■□□□□ 0.42
LMNB1-203ENST00000460265 KIF28PB7ZC32 967 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 SYCP1Q15431 976 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 IFIT1BQ5T764 474 aaKnown RBP17.69■□□□□ 0.42
LMNB1-203ENST00000460265 KLHL10Q6JEL2 608 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 DIS3L2Q8IYB7 885 aaKnown RBP17.69■□□□□ 0.42
LMNB1-203ENST00000460265 PAXBP1Q9Y5B6 917 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 PTPN21Q16825 1174 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 FAM47AQ5JRC9 791 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 ADALQ6DHV7 355 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 BRAPQ7Z569 592 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 LINC00301Q8NCQ3 95 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 CABP5Q9NP86 173 aa17.69■□□□□ 0.42
LMNB1-203ENST00000460265 CCNL1Q9UK58 526 aaPredicted RBP17.69■□□□□ 0.42
LMNB1-203ENST00000460265 TSPY2A6NKD2 308 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 USP17L12C9JPN9 530 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 USP17L21D6R901 530 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 ZNF75DP51815 510 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 TPTE2Q6XPS3 522 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 RFX7Q2KHR2 1363 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 ZNF142P52746 1687 aaPredicted RBP17.68■□□□□ 0.42
LMNB1-203ENST00000460265 CCDC196A0A1B0GTZ2 297 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 SH2B2O14492 632 aaPredicted RBP17.68■□□□□ 0.42
LMNB1-203ENST00000460265 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
LMNB1-203ENST00000460265 CFAP100Q494V2 611 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 RTCBQ9Y3I0 505 aaKnown RBP17.68■□□□□ 0.42
LMNB1-203ENST00000460265 PES1O00541 588 aaKnown RBP17.68■□□□□ 0.42
LMNB1-203ENST00000460265 PPARAQ07869 468 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 PTF1AQ7RTS3 328 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 TMC6Q7Z403 805 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 CATIPQ7Z7H3 387 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 WASF1Q92558 559 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 TMX1Q9H3N1 280 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 HPS5Q9UPZ3 1129 aa17.68■□□□□ 0.42
LMNB1-203ENST00000460265 V9GY48 417 aaPredicted RBP17.68■□□□□ 0.42
LMNB1-203ENST00000460265 AFDNP55196 1824 aaKnown RBP17.68■□□□□ 0.42
LMNB1-203ENST00000460265 G3V3G9 751 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 SMIM22K7EJ46 135 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 TULP2O00295 520 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 CAMTA2O94983 1202 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 KIF23Q02241 960 aaPredicted RBP17.67■□□□□ 0.42
LMNB1-203ENST00000460265 DCAF8Q5TAQ9 597 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 HOMER1Q86YM7 354 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 C5P01031 1676 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 GSG1L2A8MUP6 293 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 FAM177A1Q8N128 213 aaPredicted RBP17.67■□□□□ 0.42
LMNB1-203ENST00000460265 MKNK2Q9HBH9 465 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 FEZ2Q9UHY8 353 aaPredicted RBP17.67■□□□□ 0.42
LMNB1-203ENST00000460265 PFKFB1P16118 471 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 KMT5BQ4FZB7 885 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 MCM9Q9NXL9 1143 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 RSPH14Q9UHP6 348 aa17.67■□□□□ 0.42
LMNB1-203ENST00000460265 TRPM3Q9HCF6 1732 aaPredicted RBP17.67■□□□□ 0.42
LMNB1-203ENST00000460265 ZMYM6O95789 1325 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 NR5A1Q13285 461 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 ARID5BQ14865 1188 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 EPB41L4AQ9HCS5 686 aaPredicted RBP17.66■□□□□ 0.42
LMNB1-203ENST00000460265 RTEL1Q9NZ71 1219 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 FUCA2Q9BTY2 467 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 IFNKQ9P0W0 207 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 STX8Q9UNK0 236 aa17.66■□□□□ 0.42
LMNB1-203ENST00000460265 FOXP2O15409 715 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms