RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 ZSCAN29Q8IWY8 852 aaPredicted RBP17.38■□□□□ 0.37
THBS3-204ENST00000460050 DCTPP1Q9H773 170 aa17.38■□□□□ 0.37
THBS3-204ENST00000460050 CASP8AP2Q9UKL3 1982 aa17.37■□□□□ 0.37
THBS3-204ENST00000460050 MANSC4A6NHS7 340 aaPredicted RBP17.37■□□□□ 0.37
THBS3-204ENST00000460050 BAG3O95817 575 aa17.37■□□□□ 0.37
THBS3-204ENST00000460050 TM4SF4P48230 202 aa17.37■□□□□ 0.37
THBS3-204ENST00000460050 SH3BP5LQ7L8J4 393 aa17.37■□□□□ 0.37
THBS3-204ENST00000460050 TEX11Q8IYF3 940 aa17.37■□□□□ 0.37
THBS3-204ENST00000460050 SH3RF3Q8TEJ3 882 aaPredicted RBP17.37■□□□□ 0.37
THBS3-204ENST00000460050 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.37■□□□□ 0.37
THBS3-204ENST00000460050 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
THBS3-204ENST00000460050 OPTNQ96CV9 577 aa17.37■□□□□ 0.37
THBS3-204ENST00000460050 AATFQ9NY61 560 aaKnown RBP eCLIP17.37■□□□□ 0.37
THBS3-204ENST00000460050 ATRNL1Q5VV63 1379 aa17.37■□□□□ 0.37
THBS3-204ENST00000460050 CDK5RAP2Q96SN8 1893 aa17.36■□□□□ 0.37
THBS3-204ENST00000460050 DDTLA6NHG4 134 aaPredicted RBP17.36■□□□□ 0.37
THBS3-204ENST00000460050 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
THBS3-204ENST00000460050 CYP7A1P22680 504 aa17.36■□□□□ 0.37
THBS3-204ENST00000460050 PPP4CP60510 307 aa17.36■□□□□ 0.37
THBS3-204ENST00000460050 MAP3K12Q12852 859 aa17.36■□□□□ 0.37
THBS3-204ENST00000460050 TNS4Q8IZW8 715 aa17.36■□□□□ 0.37
THBS3-204ENST00000460050 ZKSCAN4Q969J2 545 aaPredicted RBP17.36■□□□□ 0.37
THBS3-204ENST00000460050 DNAJC2Q99543 621 aaKnown RBP17.36■□□□□ 0.37
THBS3-204ENST00000460050 SNCAIPQ9Y6H5 919 aa17.36■□□□□ 0.37
THBS3-204ENST00000460050 PLCG2P16885 1265 aa17.35■□□□□ 0.37
THBS3-204ENST00000460050 INPP5BP32019 993 aa17.35■□□□□ 0.37
THBS3-204ENST00000460050 TTF1Q15361 905 aaPredicted RBP17.35■□□□□ 0.37
THBS3-204ENST00000460050 MAGEB6Q8N7X4 407 aa17.35■□□□□ 0.37
THBS3-204ENST00000460050 SPDYE5A6NIY4 337 aa17.34■□□□□ 0.37
THBS3-204ENST00000460050 GOLIM4O00461 696 aa17.34■□□□□ 0.37
THBS3-204ENST00000460050 COL2A1P02458 1487 aaPredicted RBP17.34■□□□□ 0.37
THBS3-204ENST00000460050 ATP5JP18859 108 aa17.34■□□□□ 0.37
THBS3-204ENST00000460050 INHBEP58166 350 aa17.34■□□□□ 0.37
THBS3-204ENST00000460050 FOCADQ5VW36 1801 aa17.34■□□□□ 0.37
THBS3-204ENST00000460050 EDC3Q96F86 508 aaKnown RBP17.34■□□□□ 0.37
THBS3-204ENST00000460050 OTUD5Q96G74 571 aa17.34■□□□□ 0.37
THBS3-204ENST00000460050 OSBPL5Q9H0X9 879 aaPredicted RBP17.34■□□□□ 0.37
THBS3-204ENST00000460050 BOLA2Q9H3K6 86 aa17.34■□□□□ 0.37
THBS3-204ENST00000460050 ZNF112Q9UJU3 913 aa17.34■□□□□ 0.37
THBS3-204ENST00000460050 DYNLL1P63167 89 aaKnown RBP17.33■□□□□ 0.36
THBS3-204ENST00000460050 ERO1BQ86YB8 467 aa17.33■□□□□ 0.36
THBS3-204ENST00000460050 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.36
THBS3-204ENST00000460050 IGF2BP3O00425 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
THBS3-204ENST00000460050 SLURP2P0DP57 97 aa17.32■□□□□ 0.36
THBS3-204ENST00000460050 TMED8Q6PL24 325 aaPredicted RBP17.32■□□□□ 0.36
THBS3-204ENST00000460050 IFNL1Q8IU54 200 aa17.32■□□□□ 0.36
THBS3-204ENST00000460050 TGFBRAP1Q8WUH2 860 aa17.32■□□□□ 0.36
THBS3-204ENST00000460050 MS4A4AQ96JQ5 239 aa17.32■□□□□ 0.36
THBS3-204ENST00000460050 HAUS7Q99871 368 aa17.32■□□□□ 0.36
THBS3-204ENST00000460050 PAG1Q9NWQ8 432 aa17.32■□□□□ 0.36
THBS3-204ENST00000460050 FLT1P17948 1338 aa17.31■□□□□ 0.36
THBS3-204ENST00000460050 PHF20L1A8MW92 1017 aa17.31■□□□□ 0.36
THBS3-204ENST00000460050 TBC1D8O95759 1140 aa17.31■□□□□ 0.36
THBS3-204ENST00000460050 PDE6AP16499 860 aa17.31■□□□□ 0.36
THBS3-204ENST00000460050 MAP3K10Q02779 954 aa17.31■□□□□ 0.36
THBS3-204ENST00000460050 NOL9Q5SY16 702 aaKnown RBP17.31■□□□□ 0.36
THBS3-204ENST00000460050 SLC9C2Q5TAH2 1124 aa17.31■□□□□ 0.36
THBS3-204ENST00000460050 CERS3Q8IU89 383 aa17.31■□□□□ 0.36
THBS3-204ENST00000460050 MAPKAPK5Q8IW41 473 aa17.31■□□□□ 0.36
THBS3-204ENST00000460050 ECHDC1Q9NTX5 307 aa17.31■□□□□ 0.36
THBS3-204ENST00000460050 MYH7P12883 1935 aa17.3■□□□□ 0.36
THBS3-204ENST00000460050 TESPA1A2RU30 521 aaPredicted RBP17.3■□□□□ 0.36
THBS3-204ENST00000460050 FAM196BA6NMK8 535 aa17.3■□□□□ 0.36
THBS3-204ENST00000460050 ALDH1A1P00352 501 aa17.3■□□□□ 0.36
THBS3-204ENST00000460050 GTF2A2P52657 109 aa17.3■□□□□ 0.36
THBS3-204ENST00000460050 PPIL2Q13356 520 aa17.3■□□□□ 0.36
THBS3-204ENST00000460050 AAMPQ13685 434 aa17.3■□□□□ 0.36
THBS3-204ENST00000460050 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
THBS3-204ENST00000460050 SUPT16HQ9Y5B9 1047 aaKnown RBP17.3■□□□□ 0.36
THBS3-204ENST00000460050 SIPA1L1O43166 1804 aa17.3■□□□□ 0.36
THBS3-204ENST00000460050 DOCK1Q14185 1865 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 CCL15-CCL14A0A0B4J2E2 113 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 IRF6O14896 467 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 TBC1D12O60347 775 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 PPATQ06203 517 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 CCL15Q16663 113 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 BRI3BPQ8WY22 251 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 PTPN18Q99952 460 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 CFHR5Q9BXR6 569 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 DHX36Q9H2U1 1008 aaKnown RBP17.29■□□□□ 0.36
THBS3-204ENST00000460050 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.29■□□□□ 0.36
THBS3-204ENST00000460050 MYH1P12882 1939 aa17.29■□□□□ 0.36
THBS3-204ENST00000460050 ZNF532Q9HCE3 1301 aa17.28■□□□□ 0.36
THBS3-204ENST00000460050 TCRBV5S4A2TA0A5A2 114 aa17.28■□□□□ 0.36
THBS3-204ENST00000460050 SNAPC2Q13487 334 aa17.28■□□□□ 0.36
THBS3-204ENST00000460050 HDAC1Q13547 482 aaPredicted RBP17.28■□□□□ 0.36
THBS3-204ENST00000460050 IFFO2Q5TF58 517 aa17.28■□□□□ 0.36
THBS3-204ENST00000460050 TSHZ3Q63HK5 1081 aa17.28■□□□□ 0.36
THBS3-204ENST00000460050 OTUD7BQ6GQQ9 843 aa17.28■□□□□ 0.36
THBS3-204ENST00000460050 SCYL3Q8IZE3 742 aa17.28■□□□□ 0.36
THBS3-204ENST00000460050 EXOC6Q8TAG9 804 aa17.28■□□□□ 0.36
THBS3-204ENST00000460050 RIOK1Q9BRS2 568 aaKnown RBP17.28■□□□□ 0.36
THBS3-204ENST00000460050 R3HDMLQ9H3Y0 253 aa17.28■□□□□ 0.36
THBS3-204ENST00000460050 SAP30BPQ9UHR5 308 aaKnown RBP17.28■□□□□ 0.36
THBS3-204ENST00000460050 MAGEB6P1A0A0J9YX57 407 aa17.27■□□□□ 0.36
THBS3-204ENST00000460050 ADD2P35612 726 aa17.27■□□□□ 0.36
THBS3-204ENST00000460050 USP5P45974 858 aa17.27■□□□□ 0.36
THBS3-204ENST00000460050 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.27■□□□□ 0.36
THBS3-204ENST00000460050 PICK1Q9NRD5 415 aa17.27■□□□□ 0.36
THBS3-204ENST00000460050 PI4KBQ9UBF8 816 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms