RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 DCTN1Q14203 1278 aa10.6□□□□□ -0.71
NCSTN-209ENST00000459963 ADGRE1Q14246 886 aa10.6□□□□□ -0.71
NCSTN-209ENST00000459963 PDIA6Q15084 440 aa10.6□□□□□ -0.71
NCSTN-209ENST00000459963 UIMC1Q96RL1 719 aa10.6□□□□□ -0.71
NCSTN-209ENST00000459963 WRNIP1Q96S55 665 aa10.6□□□□□ -0.71
NCSTN-209ENST00000459963 POLR3GLQ9BT43 218 aa10.6□□□□□ -0.71
NCSTN-209ENST00000459963 PANK3Q9H999 370 aa10.6□□□□□ -0.71
NCSTN-209ENST00000459963 CFAP54Q96N23 3096 aa10.6□□□□□ -0.71
NCSTN-209ENST00000459963 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.59□□□□□ -0.71
NCSTN-209ENST00000459963 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.59□□□□□ -0.71
NCSTN-209ENST00000459963 F8W031 263 aaPredicted RBP10.59□□□□□ -0.71
NCSTN-209ENST00000459963 IRS4O14654 1257 aaPredicted RBP10.59□□□□□ -0.71
NCSTN-209ENST00000459963 U2SURPO15042 1029 aaKnown RBP10.59□□□□□ -0.71
NCSTN-209ENST00000459963 KRT37O76014 449 aa10.59□□□□□ -0.71
NCSTN-209ENST00000459963 COPS6Q7L5N1 327 aa10.59□□□□□ -0.71
NCSTN-209ENST00000459963 TXNRD3Q86VQ6 643 aa10.59□□□□□ -0.71
NCSTN-209ENST00000459963 CERS5Q8N5B7 392 aa10.59□□□□□ -0.71
NCSTN-209ENST00000459963 PHOX2BQ99453 314 aa10.59□□□□□ -0.71
NCSTN-209ENST00000459963 SENP6Q9GZR1 1112 aaPredicted RBP10.59□□□□□ -0.71
NCSTN-209ENST00000459963 TMEM39BQ9GZU3 492 aa10.59□□□□□ -0.71
NCSTN-209ENST00000459963 RBM5P52756 815 aaKnown RBP eCLIP10.58□□□□□ -0.72
NCSTN-209ENST00000459963 RTP1P59025 263 aa10.58□□□□□ -0.72
NCSTN-209ENST00000459963 PROSER3Q2NL68 480 aa10.58□□□□□ -0.72
NCSTN-209ENST00000459963 RTL5Q5HYW3 569 aaPredicted RBP10.58□□□□□ -0.72
NCSTN-209ENST00000459963 MAP3K21Q5TCX8 1036 aa10.58□□□□□ -0.72
NCSTN-209ENST00000459963 GPAT2Q6NUI2 795 aa10.58□□□□□ -0.72
NCSTN-209ENST00000459963 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
NCSTN-209ENST00000459963 ERC2O15083 957 aa10.57□□□□□ -0.72
NCSTN-209ENST00000459963 ANXA1P04083 346 aa10.57□□□□□ -0.72
NCSTN-209ENST00000459963 CCT4P50991 539 aaKnown RBP10.57□□□□□ -0.72
NCSTN-209ENST00000459963 AIMP1Q12904 312 aaKnown RBP10.57□□□□□ -0.72
NCSTN-209ENST00000459963 ERMP1Q7Z2K6 904 aa10.57□□□□□ -0.72
NCSTN-209ENST00000459963 ANKRD18AQ8IVF6 992 aa10.57□□□□□ -0.72
NCSTN-209ENST00000459963 COL26A1Q96A83 441 aa10.57□□□□□ -0.72
NCSTN-209ENST00000459963 PRDM5Q9NQX1 630 aaPredicted RBP10.57□□□□□ -0.72
NCSTN-209ENST00000459963 ZFHX4Q86UP3 3567 aa10.56□□□□□ -0.72
NCSTN-209ENST00000459963 TCP10L2B9ZVM9 353 aa10.56□□□□□ -0.72
NCSTN-209ENST00000459963 TLL1O43897 1013 aa10.56□□□□□ -0.72
NCSTN-209ENST00000459963 ITGB8P26012 769 aa10.56□□□□□ -0.72
NCSTN-209ENST00000459963 PRKAR2BP31323 418 aa10.56□□□□□ -0.72
NCSTN-209ENST00000459963 TNNI2P48788 182 aa10.56□□□□□ -0.72
NCSTN-209ENST00000459963 CCDC152Q4G0S7 254 aa10.56□□□□□ -0.72
NCSTN-209ENST00000459963 AMER1Q5JTC6 1135 aaPredicted RBP10.56□□□□□ -0.72
NCSTN-209ENST00000459963 PNISRQ8TF01 805 aaKnown RBP10.56□□□□□ -0.72
NCSTN-209ENST00000459963 XAGE3Q8WTP9 111 aa10.56□□□□□ -0.72
NCSTN-209ENST00000459963 TRIB2Q92519 343 aa10.56□□□□□ -0.72
NCSTN-209ENST00000459963 ARAP2Q8WZ64 1704 aa10.55□□□□□ -0.72
NCSTN-209ENST00000459963 REV3LO60673 3130 aa10.55□□□□□ -0.72
NCSTN-209ENST00000459963 HTATSF1O43719 755 aaKnown RBP10.55□□□□□ -0.72
NCSTN-209ENST00000459963 CSPP1Q1MSJ5 1256 aa10.55□□□□□ -0.72
NCSTN-209ENST00000459963 ISCA1Q9BUE6 129 aa10.55□□□□□ -0.72
NCSTN-209ENST00000459963 TDRD3Q9H7E2 651 aaKnown RBP10.55□□□□□ -0.72
NCSTN-209ENST00000459963 GJD2Q9UKL4 321 aa10.55□□□□□ -0.72
NCSTN-209ENST00000459963 ATP11BQ9Y2G3 1177 aa10.55□□□□□ -0.72
NCSTN-209ENST00000459963 C5orf42Q9H799 3197 aa10.55□□□□□ -0.72
NCSTN-209ENST00000459963 RGS20O76081 388 aa10.54□□□□□ -0.72
NCSTN-209ENST00000459963 EIF2S2P20042 333 aaKnown RBP10.54□□□□□ -0.72
NCSTN-209ENST00000459963 EPHB4P54760 987 aa10.54□□□□□ -0.72
NCSTN-209ENST00000459963 ARSIQ5FYB1 569 aa10.54□□□□□ -0.72
NCSTN-209ENST00000459963 ANKRD13CQ8N6S4 541 aa10.54□□□□□ -0.72
NCSTN-209ENST00000459963 SMCR8Q8TEV9 937 aaPredicted RBP10.54□□□□□ -0.72
NCSTN-209ENST00000459963 MINPP1Q9UNW1 487 aa10.54□□□□□ -0.72
NCSTN-209ENST00000459963 DOCK3Q8IZD9 2030 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 ATP5J2-PTCD1G3V325 749 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 HSP90B1P14625 803 aaKnown RBP10.53□□□□□ -0.72
NCSTN-209ENST00000459963 KLRK1P26718 216 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 SKIV2LQ15477 1246 aaKnown RBP10.53□□□□□ -0.72
NCSTN-209ENST00000459963 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
NCSTN-209ENST00000459963 MICALL1Q8N3F8 863 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
NCSTN-209ENST00000459963 PBX4Q9BYU1 374 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 RSPH6AQ9H0K4 717 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 CD320Q9NPF0 282 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 LEMD3Q9Y2U8 911 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 SLC45A1Q9Y2W3 748 aa10.53□□□□□ -0.72
NCSTN-209ENST00000459963 TRIM43BA6NCK2 446 aa10.52□□□□□ -0.73
NCSTN-209ENST00000459963 CCND3P30281 292 aaPredicted RBP10.52□□□□□ -0.73
NCSTN-209ENST00000459963 INPP5BP32019 993 aa10.52□□□□□ -0.73
NCSTN-209ENST00000459963 PBX2P40425 430 aa10.52□□□□□ -0.73
NCSTN-209ENST00000459963 FKBP1AP62942 108 aaKnown RBP10.52□□□□□ -0.73
NCSTN-209ENST00000459963 FAM110CQ1W6H9 321 aa10.52□□□□□ -0.73
NCSTN-209ENST00000459963 FASTKD5Q7L8L6 764 aaKnown RBP10.52□□□□□ -0.73
NCSTN-209ENST00000459963 HERVK_113Q902F9 699 aa10.52□□□□□ -0.73
NCSTN-209ENST00000459963 TRIM43Q96BQ3 446 aaPredicted RBP10.52□□□□□ -0.73
NCSTN-209ENST00000459963 CD209Q9NNX6 404 aa10.52□□□□□ -0.73
NCSTN-209ENST00000459963 PDLIM7Q9NR12 457 aa10.52□□□□□ -0.73
NCSTN-209ENST00000459963 CXCL11O14625 94 aa10.51□□□□□ -0.73
NCSTN-209ENST00000459963 CACNB2Q08289 660 aaPredicted RBP10.51□□□□□ -0.73
NCSTN-209ENST00000459963 CCDC129Q6ZRS4 1044 aa10.51□□□□□ -0.73
NCSTN-209ENST00000459963 SH3RF1Q7Z6J0 888 aa10.51□□□□□ -0.73
NCSTN-209ENST00000459963 HOOK2Q96ED9 719 aa10.51□□□□□ -0.73
NCSTN-209ENST00000459963 ZNF341Q9BYN7 854 aa10.51□□□□□ -0.73
NCSTN-209ENST00000459963 BSDC1Q9NW68 430 aaPredicted RBP10.51□□□□□ -0.73
NCSTN-209ENST00000459963 KNSTRNQ9Y448 316 aa10.51□□□□□ -0.73
NCSTN-209ENST00000459963 RPAP1Q9BWH6 1393 aaPredicted RBP10.51□□□□□ -0.73
NCSTN-209ENST00000459963 ZDBF2Q9HCK1 2354 aa10.51□□□□□ -0.73
NCSTN-209ENST00000459963 CACNA1GO43497 2377 aa10.5□□□□□ -0.73
NCSTN-209ENST00000459963 GFRA3O60609 400 aa10.5□□□□□ -0.73
NCSTN-209ENST00000459963 ALADP13716 330 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms