RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 FAM163AQ96GL9 167 aaPredicted RBP17.05■□□□□ 0.32
LINC01563-201ENST00000456235 ZIC5Q96T25 663 aa17.05■□□□□ 0.32
LINC01563-201ENST00000456235 PPP2R3BQ9Y5P8 575 aa17.05■□□□□ 0.32
LINC01563-201ENST00000456235 NEFLP07196 543 aa17.04■□□□□ 0.32
LINC01563-201ENST00000456235 FAM151AQ8WW52 585 aa17.04■□□□□ 0.32
LINC01563-201ENST00000456235 ARMT1Q9H993 441 aa17.04■□□□□ 0.32
LINC01563-201ENST00000456235 ATAD5Q96QE3 1844 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 FLT1P17948 1338 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 WDR33Q9C0J8 1336 aaKnown RBP17.03■□□□□ 0.32
LINC01563-201ENST00000456235 MAGEB6P1A0A0J9YX57 407 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 USP2O75604 605 aaPredicted RBP17.03■□□□□ 0.32
LINC01563-201ENST00000456235 MBD4O95243 580 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 BAG3O95817 575 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 ADD2P35612 726 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 ZNF157P51786 506 aaPredicted RBP17.03■□□□□ 0.32
LINC01563-201ENST00000456235 EVX2Q03828 476 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 FAM83AQ86UY5 434 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 IDI2Q9BXS1 227 aa17.03■□□□□ 0.32
LINC01563-201ENST00000456235 RPAP1Q9BWH6 1393 aaPredicted RBP17.02■□□□□ 0.32
LINC01563-201ENST00000456235 ERC2O15083 957 aa17.02■□□□□ 0.32
LINC01563-201ENST00000456235 PRKAB2O43741 272 aa17.02■□□□□ 0.32
LINC01563-201ENST00000456235 GLRX3O76003 335 aaKnown RBP17.02■□□□□ 0.32
LINC01563-201ENST00000456235 SUPT20HL1Q3ZLR7 823 aa17.02■□□□□ 0.32
LINC01563-201ENST00000456235 RGMBQ6NW40 437 aa17.02■□□□□ 0.32
LINC01563-201ENST00000456235 ARMC9Q7Z3E5 817 aa17.02■□□□□ 0.32
LINC01563-201ENST00000456235 RASAL3Q86YV0 1011 aa17.02■□□□□ 0.32
LINC01563-201ENST00000456235 PLEKHM2Q8IWE5 1019 aa17.02■□□□□ 0.32
LINC01563-201ENST00000456235 CSRNP1Q96S65 589 aa17.02■□□□□ 0.32
LINC01563-201ENST00000456235 RIOK1Q9BRS2 568 aaKnown RBP17.02■□□□□ 0.32
LINC01563-201ENST00000456235 OSBPL5Q9H0X9 879 aaPredicted RBP17.02■□□□□ 0.32
LINC01563-201ENST00000456235 ELP3Q9H9T3 547 aa17.02■□□□□ 0.32
LINC01563-201ENST00000456235 PCNTO95613 3336 aa17.01■□□□□ 0.31
LINC01563-201ENST00000456235 USP5P45974 858 aa17.01■□□□□ 0.31
LINC01563-201ENST00000456235 FKBP1CQ5VVH2 108 aa17.01■□□□□ 0.31
LINC01563-201ENST00000456235 KBTBD3Q8NAB2 608 aa17.01■□□□□ 0.31
LINC01563-201ENST00000456235 SDR42E1Q8WUS8 393 aa17.01■□□□□ 0.31
LINC01563-201ENST00000456235 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
LINC01563-201ENST00000456235 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
LINC01563-201ENST00000456235 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC01563-201ENST00000456235 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
LINC01563-201ENST00000456235 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.01■□□□□ 0.31
LINC01563-201ENST00000456235 DOCK1Q14185 1865 aa17.01■□□□□ 0.31
LINC01563-201ENST00000456235 ATRNL1Q5VV63 1379 aa17.01■□□□□ 0.31
LINC01563-201ENST00000456235 FAM155AB1AL88 458 aaPredicted RBP17■□□□□ 0.31
LINC01563-201ENST00000456235 TRIM6-TRIM34B2RNG4 842 aa17■□□□□ 0.31
LINC01563-201ENST00000456235 M0R2C6 588 aa17■□□□□ 0.31
LINC01563-201ENST00000456235 ENTPD3O75355 529 aa17■□□□□ 0.31
LINC01563-201ENST00000456235 PPP4CP60510 307 aa17■□□□□ 0.31
LINC01563-201ENST00000456235 ZKSCAN4Q969J2 545 aaPredicted RBP17■□□□□ 0.31
LINC01563-201ENST00000456235 WRNIP1Q96S55 665 aa17■□□□□ 0.31
LINC01563-201ENST00000456235 STAP2Q9UGK3 403 aa17■□□□□ 0.31
LINC01563-201ENST00000456235 PALD1Q9ULE6 856 aa17■□□□□ 0.31
LINC01563-201ENST00000456235 PPP1R12BO60237 982 aaPredicted RBP16.99■□□□□ 0.31
LINC01563-201ENST00000456235 INPP5BP32019 993 aa16.99■□□□□ 0.31
LINC01563-201ENST00000456235 IREB2P48200 963 aaKnown RBP16.99■□□□□ 0.31
LINC01563-201ENST00000456235 VGLL4Q14135 290 aa16.99■□□□□ 0.31
LINC01563-201ENST00000456235 RILPL2Q969X0 211 aa16.99■□□□□ 0.31
LINC01563-201ENST00000456235 LAMB1P07942 1786 aa16.99■□□□□ 0.31
LINC01563-201ENST00000456235 SMIM22K7EJ46 135 aa16.98■□□□□ 0.31
LINC01563-201ENST00000456235 SLC10A3P09131 477 aa16.98■□□□□ 0.31
LINC01563-201ENST00000456235 CYP2D6P10635 497 aa16.98■□□□□ 0.31
LINC01563-201ENST00000456235 FKBP1BP68106 108 aa16.98■□□□□ 0.31
LINC01563-201ENST00000456235 CCDC129Q6ZRS4 1044 aa16.98■□□□□ 0.31
LINC01563-201ENST00000456235 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.98■□□□□ 0.31
LINC01563-201ENST00000456235 MYH8P13535 1937 aa16.98■□□□□ 0.31
LINC01563-201ENST00000456235 CYP2D7A0A087X1C5 515 aa16.97■□□□□ 0.31
LINC01563-201ENST00000456235 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
LINC01563-201ENST00000456235 PLCG2P16885 1265 aa16.97■□□□□ 0.31
LINC01563-201ENST00000456235 GJA5P36382 358 aa16.97■□□□□ 0.31
LINC01563-201ENST00000456235 SHROOM1Q2M3G4 852 aaPredicted RBP16.97■□□□□ 0.31
LINC01563-201ENST00000456235 LDLRAD1Q5T700 205 aa16.97■□□□□ 0.31
LINC01563-201ENST00000456235 CCDC84Q86UT8 332 aaPredicted RBP16.97■□□□□ 0.31
LINC01563-201ENST00000456235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC01563-201ENST00000456235 OSBP2Q969R2 916 aa16.97■□□□□ 0.31
LINC01563-201ENST00000456235 CCDC136Q96JN2 1154 aa16.97■□□□□ 0.31
LINC01563-201ENST00000456235 ZNF341Q9BYN7 854 aa16.97■□□□□ 0.31
LINC01563-201ENST00000456235 ECE1P42892 770 aa16.96■□□□□ 0.31
LINC01563-201ENST00000456235 UBE3CQ15386 1083 aa16.96■□□□□ 0.31
LINC01563-201ENST00000456235 MAP3K11Q16584 847 aa16.96■□□□□ 0.31
LINC01563-201ENST00000456235 DCAF15Q66K64 600 aa16.96■□□□□ 0.31
LINC01563-201ENST00000456235 ZSCAN25Q6NSZ9 544 aa16.96■□□□□ 0.31
LINC01563-201ENST00000456235 AIDAQ96BJ3 306 aa16.96■□□□□ 0.31
LINC01563-201ENST00000456235 TSKSQ9UJT2 592 aa16.96■□□□□ 0.31
LINC01563-201ENST00000456235 SNCAIPQ9Y6H5 919 aa16.96■□□□□ 0.31
LINC01563-201ENST00000456235 SLC4A4Q9Y6R1 1079 aa16.96■□□□□ 0.31
LINC01563-201ENST00000456235 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.3
LINC01563-201ENST00000456235 COL2A1P02458 1487 aaPredicted RBP16.95■□□□□ 0.3
LINC01563-201ENST00000456235 GSPT1P15170 499 aaKnown RBP16.95■□□□□ 0.3
LINC01563-201ENST00000456235 KIF23Q02241 960 aaPredicted RBP16.95■□□□□ 0.3
LINC01563-201ENST00000456235 RRP1BQ14684 758 aaKnown RBP16.95■□□□□ 0.3
LINC01563-201ENST00000456235 ANKRD13AQ8IZ07 590 aa16.95■□□□□ 0.3
LINC01563-201ENST00000456235 OPTNQ96CV9 577 aa16.95■□□□□ 0.3
LINC01563-201ENST00000456235 OTUD5Q96G74 571 aa16.95■□□□□ 0.3
LINC01563-201ENST00000456235 WNK4Q96J92 1243 aa16.95■□□□□ 0.3
LINC01563-201ENST00000456235 HHIPL1Q96JK4 782 aa16.95■□□□□ 0.3
LINC01563-201ENST00000456235 CRNKL1Q9BZJ0 848 aaKnown RBP16.95■□□□□ 0.3
LINC01563-201ENST00000456235 DNAJC18Q9H819 358 aa16.95■□□□□ 0.3
LINC01563-201ENST00000456235 MAP3K9P80192 1104 aa16.94■□□□□ 0.3
LINC01563-201ENST00000456235 STK11IPQ8N1F8 1099 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms