RNA–Protein interactions for RNA: ENST00000456049.1

VSTM2A-OT1-201, VSTM2A overlapping transcript 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A-OT1, Length 3,031 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-OT1-201ENST00000456049 CIZ1Q9ULV3 898 aaPredicted RBP3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CYP46A1Q9Y6A2 500 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 RAD50Q92878 1312 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 SYCE3A1L190 88 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 EYA2O00167 538 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TOMM70O94826 608 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 VIL1P09327 827 aaKnown RBP3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 MKRN3Q13064 507 aaKnown RBP3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 MTX1Q13505 466 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 L1TD1Q5T7N2 865 aaKnown RBP3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 ANGEL2Q5VTE6 544 aaKnown RBP3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CIAPIN1Q6FI81 312 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 L3MBTL3Q96JM7 780 aaPredicted RBP3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CDC5LQ99459 802 aaKnown RBP3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CEP126Q9P2H0 1117 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TFIP11Q9UBB9 837 aaKnown RBP3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CLEC11AQ9Y240 323 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 WDR90Q96KV7 1748 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TTC41PQ6P2S7 1318 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CCDC171Q6TFL3 1326 aa3.63□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 A0A1B0GUL7 405 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 SLC27A2O14975 620 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 IFIT1P09914 478 aaKnown RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 GJB2P29033 226 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 MCAMP43121 646 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CCT2P78371 535 aaKnown RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CAP1Q01518 475 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 GUCY1B3Q02153 619 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 NFIAQ12857 509 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 USP48Q86UV5 1035 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 GPT2Q8TD30 523 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CHMP4CQ96CF2 233 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CWC22Q9HCG8 908 aaKnown RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 LMBRD1Q9NUN5 540 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 GGA3Q9NZ52 723 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 LIMCH1Q9UPQ0 1083 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CNPY2Q9Y2B0 182 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 PASKQ96RG2 1323 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 MYH13Q9UKX3 1938 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 FAM196BA6NMK8 535 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 APPP05067 770 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 SYT1P21579 422 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 DGKZQ13574 1117 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 ME3Q16798 604 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 MFSD14BQ5SR56 506 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TTC39AQ5SRH9 613 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CCDC102BQ68D86 513 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 DPY19L2Q6NUT2 758 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 RSBN1LQ6PCB5 846 aaPredicted RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 BLOC1S2Q6QNY1 142 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 FBXO33Q7Z6M2 555 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CCDC84Q86UT8 332 aaPredicted RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 XAGE2Q96GT9 111 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 COPRSQ9NQ92 184 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 HACL1Q9UJ83 578 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 SSC5DA1L4H1 1573 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 JAK2O60674 1132 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 AOC2O75106 756 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 IDH1O75874 414 aaKnown RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 EIF6P56537 245 aaKnown RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 SKOR2Q2VWA4 1001 aaPredicted RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TDRD7Q8NHU6 1098 aaKnown RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 BRF1Q92994 677 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TRIM44Q96DX7 344 aaPredicted RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TDRD3Q9H7E2 651 aaKnown RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 MYOZ2Q9NPC6 264 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 GPHNQ9NQX3 736 aaPredicted RBP3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 PAG1Q9NWQ8 432 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TMEM63CQ9P1W3 806 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TPCN1Q9ULQ1 816 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 MED23Q9ULK4 1368 aa3.62□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 AKAP11Q9UKA4 1901 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 USP17L3A6NCW0 530 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 USP17L4A6NCW7 530 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 STX6O43752 255 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 IL1R1P14778 569 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 HSPA6P17066 643 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 ATP2B4P23634 1241 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 HMGB2P26583 209 aaKnown RBP3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 ZAP70P43403 619 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 MRE11P49959 708 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 ANAPC15P60006 121 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 DNM1Q05193 864 aaKnown RBP3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 KIF4BQ2VIQ3 1234 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 ZSCAN23Q3MJ62 389 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 LARP1BQ659C4 914 aaKnown RBP3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CYP4F22Q6NT55 531 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 USP17L1Q7RTZ2 530 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 NKX2-3Q8TAU0 364 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CLMNQ96JQ2 1002 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TMEM39BQ9GZU3 492 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 NCOA5Q9HCD5 579 aaKnown RBP3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 RRAGDQ9NQL2 400 aaPredicted RBP3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 TOMM22Q9NS69 142 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 REV3LO60673 3130 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 PEX10O60683 326 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CYP2E1P05181 493 aaPredicted RBP3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 CYP21A2P08686 494 aa3.61□□□□□ -1.83
VSTM2A-OT1-201ENST00000456049 USP17L8P0C7I0 530 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms