RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 BTBD19C9JJ37 291 aa14.7□□□□□ -0.06
PDGFB-204ENST00000455790 ENTPD3O75355 529 aa14.7□□□□□ -0.06
PDGFB-204ENST00000455790 CETPP11597 493 aa14.7□□□□□ -0.06
PDGFB-204ENST00000455790 SNAPC2Q13487 334 aa14.7□□□□□ -0.06
PDGFB-204ENST00000455790 CEP85Q6P2H3 762 aa14.7□□□□□ -0.06
PDGFB-204ENST00000455790 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.7□□□□□ -0.06
PDGFB-204ENST00000455790 NSUN4Q96CB9 384 aaKnown RBP14.7□□□□□ -0.06
PDGFB-204ENST00000455790 PHF20L1A8MW92 1017 aa14.69□□□□□ -0.06
PDGFB-204ENST00000455790 PPATQ06203 517 aa14.69□□□□□ -0.06
PDGFB-204ENST00000455790 NOL9Q5SY16 702 aaKnown RBP14.69□□□□□ -0.06
PDGFB-204ENST00000455790 SLF2Q8IX21 1173 aa14.69□□□□□ -0.06
PDGFB-204ENST00000455790 GPR108Q9NPR9 543 aa14.69□□□□□ -0.06
PDGFB-204ENST00000455790 RAI14Q9P0K7 980 aa14.69□□□□□ -0.06
PDGFB-204ENST00000455790 DBNLQ9UJU6 430 aaKnown RBP14.69□□□□□ -0.06
PDGFB-204ENST00000455790 NOP58Q9Y2X3 529 aaKnown RBP14.69□□□□□ -0.06
PDGFB-204ENST00000455790 BRCA2P51587 3418 aa14.69□□□□□ -0.06
PDGFB-204ENST00000455790 MAST2Q6P0Q8 1798 aa14.69□□□□□ -0.06
PDGFB-204ENST00000455790 UQCRFS1P1P0C7P4 283 aa14.68□□□□□ -0.06
PDGFB-204ENST00000455790 SP3Q02447 781 aa14.68□□□□□ -0.06
PDGFB-204ENST00000455790 MOGSQ13724 837 aa14.68□□□□□ -0.06
PDGFB-204ENST00000455790 TTC39AQ5SRH9 613 aa14.68□□□□□ -0.06
PDGFB-204ENST00000455790 ZSCAN29Q8IWY8 852 aaPredicted RBP14.68□□□□□ -0.06
PDGFB-204ENST00000455790 ERO1AQ96HE7 468 aa14.68□□□□□ -0.06
PDGFB-204ENST00000455790 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.68□□□□□ -0.06
PDGFB-204ENST00000455790 KCNH4Q9UQ05 1017 aa14.68□□□□□ -0.06
PDGFB-204ENST00000455790 ZSWIM8A7E2V4 1837 aa14.68□□□□□ -0.06
PDGFB-204ENST00000455790 AK9Q5TCS8 1911 aa14.68□□□□□ -0.06
PDGFB-204ENST00000455790 FAM196BA6NMK8 535 aa14.67□□□□□ -0.06
PDGFB-204ENST00000455790 EAF2Q96CJ1 260 aaPredicted RBP14.67□□□□□ -0.06
PDGFB-204ENST00000455790 CCDC8Q9H0W5 538 aaPredicted RBP14.67□□□□□ -0.06
PDGFB-204ENST00000455790 ZFYVE28Q9HCC9 887 aa14.67□□□□□ -0.06
PDGFB-204ENST00000455790 LRP2BPQ9P2M1 347 aa14.67□□□□□ -0.06
PDGFB-204ENST00000455790 EXOC6BQ9Y2D4 811 aa14.67□□□□□ -0.06
PDGFB-204ENST00000455790 MKI67P46013 3256 aaKnown RBP14.67□□□□□ -0.06
PDGFB-204ENST00000455790 CYP2E1P05181 493 aaPredicted RBP14.66□□□□□ -0.06
PDGFB-204ENST00000455790 ZAP70P43403 619 aa14.66□□□□□ -0.06
PDGFB-204ENST00000455790 GSTO1P78417 241 aa14.66□□□□□ -0.06
PDGFB-204ENST00000455790 MAP3K10Q02779 954 aa14.66□□□□□ -0.06
PDGFB-204ENST00000455790 ADGRA1Q86SQ6 560 aa14.66□□□□□ -0.06
PDGFB-204ENST00000455790 CCDC84Q86UT8 332 aaPredicted RBP14.66□□□□□ -0.06
PDGFB-204ENST00000455790 SCYL3Q8IZE3 742 aa14.66□□□□□ -0.06
PDGFB-204ENST00000455790 SH3RF3Q8TEJ3 882 aaPredicted RBP14.66□□□□□ -0.06
PDGFB-204ENST00000455790 ARHGAP39Q9C0H5 1083 aa14.66□□□□□ -0.06
PDGFB-204ENST00000455790 EFCC1Q9HA90 598 aa14.66□□□□□ -0.06
PDGFB-204ENST00000455790 PIH1D3Q9NQM4 214 aaKnown RBP14.66□□□□□ -0.06
PDGFB-204ENST00000455790 PTPN22Q9Y2R2 807 aa14.66□□□□□ -0.06
PDGFB-204ENST00000455790 TLR2O60603 784 aa14.65□□□□□ -0.06
PDGFB-204ENST00000455790 CCDC158Q5M9N0 1113 aa14.65□□□□□ -0.06
PDGFB-204ENST00000455790 ZCCHC17Q9NP64 241 aaKnown RBP14.65□□□□□ -0.06
PDGFB-204ENST00000455790 NDUFB9Q9Y6M9 179 aa14.65□□□□□ -0.06
PDGFB-204ENST00000455790 DOCK1Q14185 1865 aa14.65□□□□□ -0.06
PDGFB-204ENST00000455790 ADGRA2Q96PE1 1338 aa14.65□□□□□ -0.06
PDGFB-204ENST00000455790 COL2A1P02458 1487 aaPredicted RBP14.64□□□□□ -0.07
PDGFB-204ENST00000455790 PDHXO00330 501 aa14.64□□□□□ -0.07
PDGFB-204ENST00000455790 LDHCP07864 332 aa14.64□□□□□ -0.07
PDGFB-204ENST00000455790 PTPRAP18433 802 aa14.64□□□□□ -0.07
PDGFB-204ENST00000455790 NAA16Q6N069 864 aaPredicted RBP14.64□□□□□ -0.07
PDGFB-204ENST00000455790 ANKRD23Q86SG2 305 aa14.64□□□□□ -0.07
PDGFB-204ENST00000455790 TEX11Q8IYF3 940 aa14.64□□□□□ -0.07
PDGFB-204ENST00000455790 ZNF512BQ96KM6 892 aaPredicted RBP14.64□□□□□ -0.07
PDGFB-204ENST00000455790 OSBPL5Q9H0X9 879 aaPredicted RBP14.64□□□□□ -0.07
PDGFB-204ENST00000455790 AATFQ9NY61 560 aaKnown RBP eCLIP14.64□□□□□ -0.07
PDGFB-204ENST00000455790 COG6Q9Y2V7 657 aa14.64□□□□□ -0.07
PDGFB-204ENST00000455790 ZHX2Q9Y6X8 837 aa14.64□□□□□ -0.07
PDGFB-204ENST00000455790 MYO5AQ9Y4I1 1855 aaKnown RBP14.63□□□□□ -0.07
PDGFB-204ENST00000455790 NPM3O75607 178 aaKnown RBP14.63□□□□□ -0.07
PDGFB-204ENST00000455790 ECM2O94769 699 aaPredicted RBP14.63□□□□□ -0.07
PDGFB-204ENST00000455790 RRP1BQ14684 758 aaKnown RBP14.63□□□□□ -0.07
PDGFB-204ENST00000455790 GPAT2Q6NUI2 795 aa14.63□□□□□ -0.07
PDGFB-204ENST00000455790 PICK1Q9NRD5 415 aa14.63□□□□□ -0.07
PDGFB-204ENST00000455790 CPA4Q9UI42 421 aa14.63□□□□□ -0.07
PDGFB-204ENST00000455790 PTCH2Q9Y6C5 1203 aa14.63□□□□□ -0.07
PDGFB-204ENST00000455790 SIPA1L1O43166 1804 aa14.63□□□□□ -0.07
PDGFB-204ENST00000455790 PHIPQ8WWQ0 1821 aa14.62□□□□□ -0.07
PDGFB-204ENST00000455790 A0A0G2JLL6 359 aaPredicted RBP14.62□□□□□ -0.07
PDGFB-204ENST00000455790 POTEFA5A3E0 1075 aa14.62□□□□□ -0.07
PDGFB-204ENST00000455790 CTGFP29279 349 aa14.62□□□□□ -0.07
PDGFB-204ENST00000455790 LACTBP83111 547 aaPredicted RBP14.62□□□□□ -0.07
PDGFB-204ENST00000455790 C17orf99Q6UX52 265 aa14.62□□□□□ -0.07
PDGFB-204ENST00000455790 PRRT2Q7Z6L0 340 aaPredicted RBP14.62□□□□□ -0.07
PDGFB-204ENST00000455790 AACSQ86V21 672 aa14.62□□□□□ -0.07
PDGFB-204ENST00000455790 SIRT2Q8IXJ6 389 aa14.62□□□□□ -0.07
PDGFB-204ENST00000455790 IL1RAPL2Q9NP60 686 aa14.62□□□□□ -0.07
PDGFB-204ENST00000455790 RCAN3Q9UKA8 241 aa14.62□□□□□ -0.07
PDGFB-204ENST00000455790 AFG3L2Q9Y4W6 797 aa14.62□□□□□ -0.07
PDGFB-204ENST00000455790 CXCL11O14625 94 aa14.61□□□□□ -0.07
PDGFB-204ENST00000455790 TBC1D12O60347 775 aa14.61□□□□□ -0.07
PDGFB-204ENST00000455790 CTNND1O60716 968 aaKnown RBP14.61□□□□□ -0.07
PDGFB-204ENST00000455790 MAP4K4O95819 1239 aaPredicted RBP14.61□□□□□ -0.07
PDGFB-204ENST00000455790 CYP2C8P10632 490 aa14.61□□□□□ -0.07
PDGFB-204ENST00000455790 C20orf194Q5TEA3 1177 aa14.61□□□□□ -0.07
PDGFB-204ENST00000455790 MAPKAPK5Q8IW41 473 aa14.61□□□□□ -0.07
PDGFB-204ENST00000455790 ARMC5Q96C12 935 aa14.61□□□□□ -0.07
PDGFB-204ENST00000455790 ANTXR1Q9H6X2 564 aa14.61□□□□□ -0.07
PDGFB-204ENST00000455790 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.61□□□□□ -0.07
PDGFB-204ENST00000455790 ZBTB40Q9NUA8 1239 aa14.61□□□□□ -0.07
PDGFB-204ENST00000455790 FLT1P17948 1338 aa14.61□□□□□ -0.07
PDGFB-204ENST00000455790 PTPRFP10586 1907 aa14.6□□□□□ -0.07
PDGFB-204ENST00000455790 TRIM75PA6NK02 468 aa14.6□□□□□ -0.07
PDGFB-204ENST00000455790 APBB1O00213 710 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms