RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 MKRN3Q13064 507 aaKnown RBP19.77■□□□□ 0.76
SMPD4-214ENST00000455548 PICALMQ13492 652 aa19.77■□□□□ 0.76
SMPD4-214ENST00000455548 CERS3Q8IU89 383 aa19.77■□□□□ 0.76
SMPD4-214ENST00000455548 ZFPM1Q8IX07 1006 aa19.77■□□□□ 0.76
SMPD4-214ENST00000455548 WRNIP1Q96S55 665 aa19.77■□□□□ 0.76
SMPD4-214ENST00000455548 DNAJC2Q99543 621 aaKnown RBP19.77■□□□□ 0.76
SMPD4-214ENST00000455548 ANTXR1Q9H6X2 564 aa19.77■□□□□ 0.76
SMPD4-214ENST00000455548 COL2A1P02458 1487 aaPredicted RBP19.76■□□□□ 0.75
SMPD4-214ENST00000455548 MANSC4A6NHS7 340 aaPredicted RBP19.76■□□□□ 0.75
SMPD4-214ENST00000455548 TM4SF4P48230 202 aa19.76■□□□□ 0.75
SMPD4-214ENST00000455548 INHBEP58166 350 aa19.76■□□□□ 0.75
SMPD4-214ENST00000455548 VGLL4Q14135 290 aa19.76■□□□□ 0.75
SMPD4-214ENST00000455548 MIGA2Q7L4E1 593 aa19.76■□□□□ 0.75
SMPD4-214ENST00000455548 SH3RF3Q8TEJ3 882 aaPredicted RBP19.76■□□□□ 0.75
SMPD4-214ENST00000455548 GPATCH3Q96I76 525 aa19.76■□□□□ 0.75
SMPD4-214ENST00000455548 ELP3Q9H9T3 547 aa19.76■□□□□ 0.75
SMPD4-214ENST00000455548 AATFQ9NY61 560 aaKnown RBP eCLIP19.76■□□□□ 0.75
SMPD4-214ENST00000455548 CDK5RAP2Q96SN8 1893 aa19.75■□□□□ 0.75
SMPD4-214ENST00000455548 ATRNL1Q5VV63 1379 aa19.75■□□□□ 0.75
SMPD4-214ENST00000455548 FOCADQ5VW36 1801 aa19.75■□□□□ 0.75
SMPD4-214ENST00000455548 GOLIM4O00461 696 aa19.75■□□□□ 0.75
SMPD4-214ENST00000455548 ADGRA1Q86SQ6 560 aa19.75■□□□□ 0.75
SMPD4-214ENST00000455548 MAGEB6Q8N7X4 407 aa19.75■□□□□ 0.75
SMPD4-214ENST00000455548 PAG1Q9NWQ8 432 aa19.75■□□□□ 0.75
SMPD4-214ENST00000455548 ZNF112Q9UJU3 913 aa19.75■□□□□ 0.75
SMPD4-214ENST00000455548 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
SMPD4-214ENST00000455548 DDTLA6NHG4 134 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-214ENST00000455548 TRPA1O75762 1119 aa19.74■□□□□ 0.75
SMPD4-214ENST00000455548 HDAC1Q13547 482 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-214ENST00000455548 COL13A1Q5TAT6 717 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-214ENST00000455548 SH3BP5LQ7L8J4 393 aa19.74■□□□□ 0.75
SMPD4-214ENST00000455548 OPTNQ96CV9 577 aa19.74■□□□□ 0.75
SMPD4-214ENST00000455548 HAUS7Q99871 368 aa19.74■□□□□ 0.75
SMPD4-214ENST00000455548 BOLA2Q9H3K6 86 aa19.74■□□□□ 0.75
SMPD4-214ENST00000455548 ECHDC1Q9NTX5 307 aa19.74■□□□□ 0.75
SMPD4-214ENST00000455548 RNF186Q9NXI6 227 aa19.74■□□□□ 0.75
SMPD4-214ENST00000455548 TSKSQ9UJT2 592 aa19.74■□□□□ 0.75
SMPD4-214ENST00000455548 GJA5P36382 358 aa19.73■□□□□ 0.75
SMPD4-214ENST00000455548 ERO1BQ86YB8 467 aa19.73■□□□□ 0.75
SMPD4-214ENST00000455548 ZKSCAN4Q969J2 545 aaPredicted RBP19.73■□□□□ 0.75
SMPD4-214ENST00000455548 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
SMPD4-214ENST00000455548 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
SMPD4-214ENST00000455548 SNCAIPQ9Y6H5 919 aa19.73■□□□□ 0.75
SMPD4-214ENST00000455548 MYH7P12883 1935 aa19.72■□□□□ 0.75
SMPD4-214ENST00000455548 SPDYE5A6NIY4 337 aa19.72■□□□□ 0.75
SMPD4-214ENST00000455548 PDE6AP16499 860 aa19.72■□□□□ 0.75
SMPD4-214ENST00000455548 MAP3K10Q02779 954 aa19.72■□□□□ 0.75
SMPD4-214ENST00000455548 SLC9C2Q5TAH2 1124 aa19.72■□□□□ 0.75
SMPD4-214ENST00000455548 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
SMPD4-214ENST00000455548 INPP5BP32019 993 aa19.71■□□□□ 0.75
SMPD4-214ENST00000455548 DYNLL1P63167 89 aaKnown RBP19.71■□□□□ 0.75
SMPD4-214ENST00000455548 NOL9Q5SY16 702 aaKnown RBP19.71■□□□□ 0.75
SMPD4-214ENST00000455548 MIGA1Q8NAN2 632 aa19.71■□□□□ 0.75
SMPD4-214ENST00000455548 EXOC6Q8TAG9 804 aa19.71■□□□□ 0.75
SMPD4-214ENST00000455548 TGFBRAP1Q8WUH2 860 aa19.71■□□□□ 0.75
SMPD4-214ENST00000455548 DHX36Q9H2U1 1008 aaKnown RBP19.71■□□□□ 0.75
SMPD4-214ENST00000455548 CASP8AP2Q9UKL3 1982 aa19.7■□□□□ 0.74
SMPD4-214ENST00000455548 TBC1D12O60347 775 aa19.7■□□□□ 0.74
SMPD4-214ENST00000455548 ALDH1A1P00352 501 aa19.7■□□□□ 0.74
SMPD4-214ENST00000455548 GTF2A2P52657 109 aa19.7■□□□□ 0.74
SMPD4-214ENST00000455548 EDC3Q96F86 508 aaKnown RBP19.7■□□□□ 0.74
SMPD4-214ENST00000455548 OTUD5Q96G74 571 aa19.7■□□□□ 0.74
SMPD4-214ENST00000455548 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMPD4-214ENST00000455548 FLT1P17948 1338 aa19.7■□□□□ 0.74
SMPD4-214ENST00000455548 MYH1P12882 1939 aa19.69■□□□□ 0.74
SMPD4-214ENST00000455548 PHF20L1A8MW92 1017 aa19.69■□□□□ 0.74
SMPD4-214ENST00000455548 PPIL2Q13356 520 aa19.69■□□□□ 0.74
SMPD4-214ENST00000455548 OTUD7BQ6GQQ9 843 aa19.69■□□□□ 0.74
SMPD4-214ENST00000455548 MAPKAPK5Q8IW41 473 aa19.69■□□□□ 0.74
SMPD4-214ENST00000455548 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
SMPD4-214ENST00000455548 RWDD1Q9H446 243 aaPredicted RBP19.69■□□□□ 0.74
SMPD4-214ENST00000455548 TTC41PQ6P2S7 1318 aa19.69■□□□□ 0.74
SMPD4-214ENST00000455548 MAGEB6P1A0A0J9YX57 407 aa19.68■□□□□ 0.74
SMPD4-214ENST00000455548 PPATQ06203 517 aa19.68■□□□□ 0.74
SMPD4-214ENST00000455548 ZSCAN25Q6NSZ9 544 aa19.68■□□□□ 0.74
SMPD4-214ENST00000455548 IFNL1Q8IU54 200 aa19.68■□□□□ 0.74
SMPD4-214ENST00000455548 TNS4Q8IZW8 715 aa19.68■□□□□ 0.74
SMPD4-214ENST00000455548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMPD4-214ENST00000455548 HERC5Q9UII4 1024 aaKnown RBP19.68■□□□□ 0.74
SMPD4-214ENST00000455548 ZNF532Q9HCE3 1301 aa19.68■□□□□ 0.74
SMPD4-214ENST00000455548 DOCK1Q14185 1865 aa19.67■□□□□ 0.74
SMPD4-214ENST00000455548 TCRBV5S4A2TA0A5A2 114 aa19.67■□□□□ 0.74
SMPD4-214ENST00000455548 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
SMPD4-214ENST00000455548 ERC2O15083 957 aa19.67■□□□□ 0.74
SMPD4-214ENST00000455548 CTNND1O60716 968 aaKnown RBP19.67■□□□□ 0.74
SMPD4-214ENST00000455548 USP5P45974 858 aa19.67■□□□□ 0.74
SMPD4-214ENST00000455548 ANKRD45Q5TZF3 282 aa19.67■□□□□ 0.74
SMPD4-214ENST00000455548 MS4A4AQ96JQ5 239 aa19.67■□□□□ 0.74
SMPD4-214ENST00000455548 RIOK1Q9BRS2 568 aaKnown RBP19.67■□□□□ 0.74
SMPD4-214ENST00000455548 CFHR5Q9BXR6 569 aa19.67■□□□□ 0.74
SMPD4-214ENST00000455548 PICK1Q9NRD5 415 aa19.67■□□□□ 0.74
SMPD4-214ENST00000455548 PI4KBQ9UBF8 816 aa19.67■□□□□ 0.74
SMPD4-214ENST00000455548 IGF2BP3O00425 579 aaKnown RBP eCLIP19.66■□□□□ 0.74
SMPD4-214ENST00000455548 CETPP11597 493 aa19.66■□□□□ 0.74
SMPD4-214ENST00000455548 ADD2P35612 726 aa19.66■□□□□ 0.74
SMPD4-214ENST00000455548 SNAPC2Q13487 334 aa19.66■□□□□ 0.74
SMPD4-214ENST00000455548 SCYL3Q8IZE3 742 aa19.66■□□□□ 0.74
SMPD4-214ENST00000455548 CRNKL1Q9BZJ0 848 aaKnown RBP19.66■□□□□ 0.74
SMPD4-214ENST00000455548 SIPA1L1O43166 1804 aa19.65■□□□□ 0.74
SMPD4-214ENST00000455548 CCL15-CCL14A0A0B4J2E2 113 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms