RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CLRN2A0PK11 232 aa19.79■□□□□ 0.76
CCDC90B-202ENST00000455220 TDO2P48775 406 aa19.79■□□□□ 0.76
CCDC90B-202ENST00000455220 CACNB3P54284 484 aa19.79■□□□□ 0.76
CCDC90B-202ENST00000455220 DDRGK1Q96HY6 314 aa19.79■□□□□ 0.76
CCDC90B-202ENST00000455220 FAM198AQ9UFP1 575 aa19.79■□□□□ 0.76
CCDC90B-202ENST00000455220 MYH1P12882 1939 aa19.79■□□□□ 0.76
CCDC90B-202ENST00000455220 ENTPD3O75355 529 aa19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 EPHX2P34913 555 aa19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 SBK1Q52WX2 424 aa19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 USP50Q70EL3 339 aaPredicted RBP19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 KCNB2Q92953 911 aa19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 OSBPL5Q9H0X9 879 aaPredicted RBP19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 TAF1DQ9H5J8 278 aaPredicted RBP19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 ARPP21Q9UBL0 812 aaPredicted RBP19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 LAMB1P07942 1786 aa19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 COL2A1P02458 1487 aaPredicted RBP19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 PICALMQ13492 652 aa19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 CTR9Q6PD62 1173 aa19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 C22orf23Q9BZE7 217 aa19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 MCM9Q9NXL9 1143 aa19.78■□□□□ 0.76
CCDC90B-202ENST00000455220 ASTN2O75129 1339 aaPredicted RBP19.77■□□□□ 0.76
CCDC90B-202ENST00000455220 RBM25P49756 843 aaKnown RBP19.77■□□□□ 0.76
CCDC90B-202ENST00000455220 CREB3L3Q68CJ9 461 aa19.77■□□□□ 0.76
CCDC90B-202ENST00000455220 FAM83AQ86UY5 434 aa19.77■□□□□ 0.76
CCDC90B-202ENST00000455220 CNTNAP1P78357 1384 aa19.76■□□□□ 0.75
CCDC90B-202ENST00000455220 USP17L12C9JPN9 530 aa19.76■□□□□ 0.75
CCDC90B-202ENST00000455220 USP17L21D6R901 530 aa19.76■□□□□ 0.75
CCDC90B-202ENST00000455220 SLC27A2O14975 620 aa19.76■□□□□ 0.75
CCDC90B-202ENST00000455220 CYP21A2P08686 494 aa19.76■□□□□ 0.75
CCDC90B-202ENST00000455220 MCCP23508 829 aa19.76■□□□□ 0.75
CCDC90B-202ENST00000455220 TBC1D32Q96NH3 1257 aa19.76■□□□□ 0.75
CCDC90B-202ENST00000455220 VEZTQ9HBM0 779 aa19.76■□□□□ 0.75
CCDC90B-202ENST00000455220 ATRNL1Q5VV63 1379 aa19.76■□□□□ 0.75
CCDC90B-202ENST00000455220 PITPNM2Q9BZ72 1349 aa19.75■□□□□ 0.75
CCDC90B-202ENST00000455220 TNFAIP1Q13829 316 aa19.75■□□□□ 0.75
CCDC90B-202ENST00000455220 IMMTQ16891 758 aaKnown RBP19.75■□□□□ 0.75
CCDC90B-202ENST00000455220 RNF20Q5VTR2 975 aa19.75■□□□□ 0.75
CCDC90B-202ENST00000455220 ZFPM1Q8IX07 1006 aa19.75■□□□□ 0.75
CCDC90B-202ENST00000455220 FAM151AQ8WW52 585 aa19.75■□□□□ 0.75
CCDC90B-202ENST00000455220 IL17RAQ96F46 866 aa19.75■□□□□ 0.75
CCDC90B-202ENST00000455220 ANAPC4Q9UJX5 808 aa19.75■□□□□ 0.75
CCDC90B-202ENST00000455220 TCP10L2B9ZVM9 353 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 ZNF213O14771 459 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 TSGA10IPQ3SY00 556 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 C12orf60Q5U649 245 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 ANGEL2Q5VTE6 544 aaKnown RBP19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 PNMA8AQ86V59 439 aaPredicted RBP19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 APOBEC3FQ8IUX4 373 aaKnown RBP19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 ZC3H15Q8WU90 426 aaKnown RBP19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 GGA3Q9NZ52 723 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 SAP30BPQ9UHR5 308 aaKnown RBP19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 PALD1Q9ULE6 856 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 ROBO3Q96MS0 1386 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 VEGFAP15692 232 aaPredicted RBP19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 ANAPC15P60006 121 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 PPARAQ07869 468 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 TCP10Q12799 353 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 SH3BP5LQ7L8J4 393 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 RASEFQ8IZ41 740 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 NBPF3Q9H094 633 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 DHX36Q9H2U1 1008 aaKnown RBP19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 PGAP2Q9UHJ9 254 aa19.74■□□□□ 0.75
CCDC90B-202ENST00000455220 CYP2D7A0A087X1C5 515 aa19.73■□□□□ 0.75
CCDC90B-202ENST00000455220 CYP2D6P10635 497 aa19.73■□□□□ 0.75
CCDC90B-202ENST00000455220 TNNI2P48788 182 aa19.73■□□□□ 0.75
CCDC90B-202ENST00000455220 AMOTL1Q8IY63 956 aa19.73■□□□□ 0.75
CCDC90B-202ENST00000455220 SNX14Q9Y5W7 946 aa19.73■□□□□ 0.75
CCDC90B-202ENST00000455220 TAF6LQ9Y6J9 622 aa19.73■□□□□ 0.75
CCDC90B-202ENST00000455220 SIPA1L1O43166 1804 aa19.73■□□□□ 0.75
CCDC90B-202ENST00000455220 DDTLA6NHG4 134 aaPredicted RBP19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 MINDY4BA8MYZ0 360 aa19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 POLR3DP05423 398 aaPredicted RBP19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 ZKSCAN1P17029 563 aaPredicted RBP19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 PLCD1P51178 756 aa19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 HAND2P61296 217 aa19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 EVX2Q03828 476 aa19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 TTC6Q86TZ1 520 aa19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 RRAGCQ9HB90 399 aa19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 POLR2AP24928 1970 aaKnown RBP19.72■□□□□ 0.75
CCDC90B-202ENST00000455220 SMIM22K7EJ46 135 aa19.71■□□□□ 0.75
CCDC90B-202ENST00000455220 RASA3Q14644 834 aa19.71■□□□□ 0.75
CCDC90B-202ENST00000455220 TBC1D10CQ8IV04 446 aa19.71■□□□□ 0.75
CCDC90B-202ENST00000455220 HLA-DOAP06340 250 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 STAG1Q8WVM7 1258 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 TMEM39BQ9GZU3 492 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 DEFB129Q9H1M3 183 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 EHD4Q9H223 541 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 NMRK2Q9NPI5 230 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 TAOK2Q9UL54 1235 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 PPP2R3BQ9Y5P8 575 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 FGRP09769 529 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 CTDSPL2Q05D32 466 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 GABPAQ06546 454 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 STOX1Q6ZVD7 989 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 METTL16Q86W50 562 aaKnown RBP19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 TEPSINQ96N21 525 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 KIF2CQ99661 725 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 PI4KBQ9UBF8 816 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 TACC3Q9Y6A5 838 aa19.7■□□□□ 0.74
CCDC90B-202ENST00000455220 E7EWF7 191 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms