RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 TEX11Q8IYF3 940 aa30.32■■■□□ 2.44
MSH2-203ENST00000454849 HOOK2Q96ED9 719 aa30.32■■■□□ 2.44
MSH2-203ENST00000454849 NOL10Q9BSC4 688 aaKnown RBP30.32■■■□□ 2.44
MSH2-203ENST00000454849 ZNF341Q9BYN7 854 aa30.32■■■□□ 2.44
MSH2-203ENST00000454849 OTOFQ9HC10 1997 aa30.32■■■□□ 2.44
MSH2-203ENST00000454849 RFX7Q2KHR2 1363 aa30.31■■■□□ 2.44
MSH2-203ENST00000454849 DYNLL1P63167 89 aaKnown RBP30.31■■■□□ 2.44
MSH2-203ENST00000454849 MAGEB6Q8N7X4 407 aa30.31■■■□□ 2.44
MSH2-203ENST00000454849 BOLA2Q9H3K6 86 aa30.31■■■□□ 2.44
MSH2-203ENST00000454849 UNCXA6NJT0 531 aa30.3■■■□□ 2.44
MSH2-203ENST00000454849 GOLIM4O00461 696 aa30.3■■■□□ 2.44
MSH2-203ENST00000454849 TBC1D8O95759 1140 aa30.3■■■□□ 2.44
MSH2-203ENST00000454849 TM4SF4P48230 202 aa30.3■■■□□ 2.44
MSH2-203ENST00000454849 MIGA1Q8NAN2 632 aa30.3■■■□□ 2.44
MSH2-203ENST00000454849 OTUD5Q96G74 571 aa30.3■■■□□ 2.44
MSH2-203ENST00000454849 SNCAIPQ9Y6H5 919 aa30.3■■■□□ 2.44
MSH2-203ENST00000454849 REM2Q8IYK8 340 aaPredicted RBP30.29■■■□□ 2.44
MSH2-203ENST00000454849 ZBTB48P10074 688 aaPredicted RBP30.28■■■□□ 2.44
MSH2-203ENST00000454849 SREBF2Q12772 1141 aa30.28■■■□□ 2.44
MSH2-203ENST00000454849 MANSC4A6NHS7 340 aaPredicted RBP30.27■■■□□ 2.44
MSH2-203ENST00000454849 BAG3O95817 575 aa30.27■■■□□ 2.44
MSH2-203ENST00000454849 SAGE1Q9NXZ1 904 aa30.27■■■□□ 2.44
MSH2-203ENST00000454849 SUPT16HQ9Y5B9 1047 aaKnown RBP30.27■■■□□ 2.44
MSH2-203ENST00000454849 FAM196BA6NMK8 535 aa30.26■■■□□ 2.43
MSH2-203ENST00000454849 MAP3K12Q12852 859 aa30.26■■■□□ 2.43
MSH2-203ENST00000454849 TSHZ3Q63HK5 1081 aa30.26■■■□□ 2.43
MSH2-203ENST00000454849 MAPKAPK5Q8IW41 473 aa30.26■■■□□ 2.43
MSH2-203ENST00000454849 TGFBRAP1Q8WUH2 860 aa30.26■■■□□ 2.43
MSH2-203ENST00000454849 R3HDMLQ9H3Y0 253 aa30.26■■■□□ 2.43
MSH2-203ENST00000454849 CASP8AP2Q9UKL3 1982 aa30.26■■■□□ 2.43
MSH2-203ENST00000454849 IGF2BP3O00425 579 aaKnown RBP eCLIP30.24■■■□□ 2.43
MSH2-203ENST00000454849 ATP5JP18859 108 aa30.24■■■□□ 2.43
MSH2-203ENST00000454849 PPP4CP60510 307 aa30.24■■■□□ 2.43
MSH2-203ENST00000454849 IFNL1Q8IU54 200 aa30.24■■■□□ 2.43
MSH2-203ENST00000454849 OSBPL5Q9H0X9 879 aaPredicted RBP30.24■■■□□ 2.43
MSH2-203ENST00000454849 ZNF112Q9UJU3 913 aa30.24■■■□□ 2.43
MSH2-203ENST00000454849 ATRNL1Q5VV63 1379 aa30.24■■■□□ 2.43
MSH2-203ENST00000454849 SLFNL1Q499Z3 407 aa30.23■■■□□ 2.43
MSH2-203ENST00000454849 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.23■■■□□ 2.43
MSH2-203ENST00000454849 PTPN18Q99952 460 aa30.23■■■□□ 2.43
MSH2-203ENST00000454849 MAST2Q6P0Q8 1798 aa30.23■■■□□ 2.43
MSH2-203ENST00000454849 SPDYE5A6NIY4 337 aa30.22■■■□□ 2.43
MSH2-203ENST00000454849 PLCG2P16885 1265 aa30.22■■■□□ 2.43
MSH2-203ENST00000454849 TTF1Q15361 905 aaPredicted RBP30.22■■■□□ 2.43
MSH2-203ENST00000454849 SLC4A8Q2Y0W8 1093 aa30.22■■■□□ 2.43
MSH2-203ENST00000454849 SLC9C2Q5TAH2 1124 aa30.22■■■□□ 2.43
MSH2-203ENST00000454849 ERO1BQ86YB8 467 aa30.22■■■□□ 2.43
MSH2-203ENST00000454849 EXOC6Q8TAG9 804 aa30.22■■■□□ 2.43
MSH2-203ENST00000454849 MS4A4AQ96JQ5 239 aa30.22■■■□□ 2.43
MSH2-203ENST00000454849 PAG1Q9NWQ8 432 aa30.22■■■□□ 2.43
MSH2-203ENST00000454849 SAP30BPQ9UHR5 308 aaKnown RBP30.22■■■□□ 2.43
MSH2-203ENST00000454849 PHF20L1A8MW92 1017 aa30.21■■■□□ 2.43
MSH2-203ENST00000454849 MAP4K4O95819 1239 aaPredicted RBP30.21■■■□□ 2.43
MSH2-203ENST00000454849 PDE6AP16499 860 aa30.21■■■□□ 2.43
MSH2-203ENST00000454849 NPM3O75607 178 aaKnown RBP30.2■■■□□ 2.43
MSH2-203ENST00000454849 CAPN15O75808 1086 aa30.2■■■□□ 2.43
MSH2-203ENST00000454849 BRI3BPQ8WY22 251 aa30.2■■■□□ 2.43
MSH2-203ENST00000454849 HAUS7Q99871 368 aa30.2■■■□□ 2.43
MSH2-203ENST00000454849 CCL15-CCL14A0A0B4J2E2 113 aa30.19■■■□□ 2.42
MSH2-203ENST00000454849 IRF6O14896 467 aa30.19■■■□□ 2.42
MSH2-203ENST00000454849 CHGBP05060 677 aa30.19■■■□□ 2.42
MSH2-203ENST00000454849 INHBEP58166 350 aa30.19■■■□□ 2.42
MSH2-203ENST00000454849 CCL15Q16663 113 aa30.19■■■□□ 2.42
MSH2-203ENST00000454849 OTUD7AQ8TE49 926 aaPredicted RBP30.19■■■□□ 2.42
MSH2-203ENST00000454849 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.19■■■□□ 2.422e-6■□□□□ 10.6
MSH2-203ENST00000454849 ECHDC1Q9NTX5 307 aa30.19■■■□□ 2.42
MSH2-203ENST00000454849 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.19■■■□□ 2.42
MSH2-203ENST00000454849 PALD1Q9ULE6 856 aa30.19■■■□□ 2.42
MSH2-203ENST00000454849 FLT1P17948 1338 aa30.19■■■□□ 2.42
MSH2-203ENST00000454849 IFFO2Q5TF58 517 aa30.18■■■□□ 2.42
MSH2-203ENST00000454849 ZNF532Q9HCE3 1301 aa30.18■■■□□ 2.42
MSH2-203ENST00000454849 DOCK2Q92608 1830 aa30.17■■■□□ 2.42
MSH2-203ENST00000454849 GTF2A2P52657 109 aa30.17■■■□□ 2.42
MSH2-203ENST00000454849 IRX6P78412 446 aaPredicted RBP30.17■■■□□ 2.42
MSH2-203ENST00000454849 USP5P45974 858 aa30.16■■■□□ 2.42
MSH2-203ENST00000454849 MAP3K10Q02779 954 aa30.16■■■□□ 2.42
MSH2-203ENST00000454849 CCDC84Q86UT8 332 aaPredicted RBP30.16■■■□□ 2.42
MSH2-203ENST00000454849 MAGEB6P1A0A0J9YX57 407 aa30.15■■■□□ 2.42
MSH2-203ENST00000454849 PPIL2Q13356 520 aa30.15■■■□□ 2.42
MSH2-203ENST00000454849 NOL9Q5SY16 702 aaKnown RBP30.15■■■□□ 2.42
MSH2-203ENST00000454849 TCRBV5S4A2TA0A5A2 114 aa30.14■■■□□ 2.42
MSH2-203ENST00000454849 TESPA1A2RU30 521 aaPredicted RBP30.14■■■□□ 2.42
MSH2-203ENST00000454849 IGSF3O75054 1194 aa30.14■■■□□ 2.42
MSH2-203ENST00000454849 PPATQ06203 517 aa30.14■■■□□ 2.42
MSH2-203ENST00000454849 ANKRD45Q5TZF3 282 aa30.14■■■□□ 2.42
MSH2-203ENST00000454849 SCYL3Q8IZE3 742 aa30.14■■■□□ 2.42
MSH2-203ENST00000454849 ZNF296Q8WUU4 475 aaPredicted RBP30.14■■■□□ 2.42
MSH2-203ENST00000454849 PICK1Q9NRD5 415 aa30.14■■■□□ 2.42
MSH2-203ENST00000454849 GPR25O00155 361 aa30.13■■■□□ 2.41
MSH2-203ENST00000454849 ALDH1A1P00352 501 aa30.13■■■□□ 2.41
MSH2-203ENST00000454849 SNAPC2Q13487 334 aa30.13■■■□□ 2.41
MSH2-203ENST00000454849 RRP1BQ14684 758 aaKnown RBP30.13■■■□□ 2.41
MSH2-203ENST00000454849 FAM43AQ8N2R8 423 aa30.13■■■□□ 2.41
MSH2-203ENST00000454849 RIOK1Q9BRS2 568 aaKnown RBP30.13■■■□□ 2.41
MSH2-203ENST00000454849 ZHX2Q9Y6X8 837 aa30.13■■■□□ 2.41
MSH2-203ENST00000454849 CRHR2Q13324 411 aa30.12■■■□□ 2.41
MSH2-203ENST00000454849 DGKZQ13574 1117 aa30.12■■■□□ 2.41
MSH2-203ENST00000454849 OTUD7BQ6GQQ9 843 aa30.12■■■□□ 2.41
MSH2-203ENST00000454849 GPATCH3Q96I76 525 aa30.12■■■□□ 2.41
MSH2-203ENST00000454849 PI4KBQ9UBF8 816 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms