RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 IREB2P48200 963 aaKnown RBP11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 CCDC158Q5M9N0 1113 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 TTC39AQ5SRH9 613 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 SPTY2D1Q68D10 685 aaPredicted RBP11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 CDC42EP5Q6NZY7 148 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 DZIP1Q86YF9 867 aaKnown RBP11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 SLC10A4Q96EP9 437 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 CCDC8Q9H0W5 538 aaPredicted RBP11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 ZBTB40Q9NUA8 1239 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 USP40Q9NVE5 1235 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 DOCK2Q92608 1830 aa11.63□□□□□ -0.55
CDC42EP3-203ENST00000453555 PDS5AQ29RF7 1337 aaKnown RBP11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 LAMB1P07942 1786 aa11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 APBB1O00213 710 aa11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 CA12O43570 354 aa11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 UQCRFS1P1P0C7P4 283 aa11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 TCP10Q12799 353 aa11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 BCL11AQ9H165 835 aa11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 RNF186Q9NXI6 227 aa11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 TLR7Q9NYK1 1049 aaKnown RBP11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 MAST2Q6P0Q8 1798 aa11.62□□□□□ -0.55
CDC42EP3-203ENST00000453555 MECOMQ03112 1051 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 SPRYD7Q5W111 196 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 FAM83AQ86UY5 434 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 SIRT2Q8IXJ6 389 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 RPAP2Q8IXW5 612 aaPredicted RBP11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 ANKRD13AQ8IZ07 590 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 EAF2Q96CJ1 260 aaPredicted RBP11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 IL1RAPL2Q9NP60 686 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 RAI14Q9P0K7 980 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 CDK5RAP2Q96SN8 1893 aa11.61□□□□□ -0.55
CDC42EP3-203ENST00000453555 BTDP43251 543 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 NFIAQ12857 509 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 FKBP1CQ5VVH2 108 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 ERC1Q8IUD2 1116 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 ZNF384Q8TF68 577 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 FAM151AQ8WW52 585 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 WNK4Q96J92 1243 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 CHMP4BQ9H444 224 aaKnown RBP11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 ELP3Q9H9T3 547 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 LRP2BPQ9P2M1 347 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 DBNLQ9UJU6 430 aaKnown RBP11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 MROH7-TTC4A0A0A0MT08 1334 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 GAKO14976 1311 aa11.6□□□□□ -0.55
CDC42EP3-203ENST00000453555 HMMRO75330 724 aa11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 ZAP70P43403 619 aa11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 HSP90AB4PQ58FF6 505 aa11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 AACSQ86V21 672 aa11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 ZFPM1Q8IX07 1006 aa11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 RHPN1Q8TCX5 695 aa11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 NSUN4Q96CB9 384 aaKnown RBP11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 SAGE1Q9NXZ1 904 aa11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 FAM198AQ9UFP1 575 aa11.59□□□□□ -0.55
CDC42EP3-203ENST00000453555 UNCXA6NJT0 531 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 SNPHO15079 494 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 TBC1D8O95759 1140 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 CYP2E1P05181 493 aaPredicted RBP11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 LDHCP07864 332 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 GJA5P36382 358 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 TM4SF4P48230 202 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 RGS3P49796 1198 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 GSTO1P78417 241 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 SREBF2Q12772 1141 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 PICALMQ13492 652 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 VGLL4Q14135 290 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 ZKSCAN4Q969J2 545 aaPredicted RBP11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 WRNIP1Q96S55 665 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 FOCADQ5VW36 1801 aa11.58□□□□□ -0.56
CDC42EP3-203ENST00000453555 RPAP1Q9BWH6 1393 aaPredicted RBP11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 GPR75-ASB3A0A0A6YYF3 556 aa11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 ZBTB48P10074 688 aaPredicted RBP11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 DCAF15Q66K64 600 aa11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 ZSCAN29Q8IWY8 852 aaPredicted RBP11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 HOOK2Q96ED9 719 aa11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 KIF1BPQ96EK5 621 aa11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 MS4A4AQ96JQ5 239 aa11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 ZNF512BQ96KM6 892 aaPredicted RBP11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 IDI2Q9BXS1 227 aa11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 ZNF341Q9BYN7 854 aa11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 DDX4Q9NQI0 724 aaKnown RBP11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 PIH1D3Q9NQM4 214 aaKnown RBP11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 CSADQ9Y600 493 aa11.57□□□□□ -0.56
CDC42EP3-203ENST00000453555 WDHD1O75717 1129 aaPredicted RBP11.56□□□□□ -0.56
CDC42EP3-203ENST00000453555 RHBDL3P58872 404 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms