RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 CCDC102BQ68D86 513 aa10.74□□□□□ -0.69
RFX3-209ENST00000451859 ITPRIPQ8IWB1 547 aa10.74□□□□□ -0.69
RFX3-209ENST00000451859 WNK4Q96J92 1243 aa10.74□□□□□ -0.69
RFX3-209ENST00000451859 NEUROD6Q96NK8 337 aa10.74□□□□□ -0.69
RFX3-209ENST00000451859 ELP3Q9H9T3 547 aa10.74□□□□□ -0.69
RFX3-209ENST00000451859 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.74□□□□□ -0.69
RFX3-209ENST00000451859 MAST2Q6P0Q8 1798 aa10.74□□□□□ -0.69
RFX3-209ENST00000451859 ATAD5Q96QE3 1844 aa10.74□□□□□ -0.69
RFX3-209ENST00000451859 LDHBP07195 334 aaKnown RBP10.73□□□□□ -0.69
RFX3-209ENST00000451859 TCP10Q12799 353 aa10.73□□□□□ -0.69
RFX3-209ENST00000451859 OS9Q13438 667 aaPredicted RBP10.73□□□□□ -0.69
RFX3-209ENST00000451859 MTX1Q13505 466 aa10.73□□□□□ -0.69
RFX3-209ENST00000451859 APOBEC3HQ6NTF7 200 aaKnown RBP10.73□□□□□ -0.69
RFX3-209ENST00000451859 ZDHHC15Q96MV8 337 aa10.73□□□□□ -0.69
RFX3-209ENST00000451859 TEPSINQ96N21 525 aa10.73□□□□□ -0.69
RFX3-209ENST00000451859 HCSTQ9UBK5 93 aa10.73□□□□□ -0.69
RFX3-209ENST00000451859 DENND2AQ9ULE3 1009 aa10.73□□□□□ -0.69
RFX3-209ENST00000451859 DAGLAQ9Y4D2 1042 aa10.73□□□□□ -0.69
RFX3-209ENST00000451859 SLC34A2O95436 690 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 RLBP1P12271 317 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 G3BP1Q13283 466 aaKnown RBP eCLIP10.72□□□□□ -0.69
RFX3-209ENST00000451859 RASGRF1Q13972 1273 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 GORABQ5T7V8 394 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 HHIPL2Q6UWX4 724 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 DZIP1Q86YF9 867 aaKnown RBP10.72□□□□□ -0.69
RFX3-209ENST00000451859 ANKRD13AQ8IZ07 590 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 OPTNQ96CV9 577 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 XAGE2Q96GT9 111 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 MFRPQ9BY79 579 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 ABCF2Q9UG63 623 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 AKAP2Q9Y2D5 859 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 SUGT1Q9Y2Z0 365 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 PCDHGA4Q9Y5G9 962 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 ZSWIM8A7E2V4 1837 aa10.72□□□□□ -0.69
RFX3-209ENST00000451859 MANSC4A6NHS7 340 aaPredicted RBP10.71□□□□□ -0.69
RFX3-209ENST00000451859 PTPRFP10586 1907 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 GJA5P36382 358 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 TM4SF4P48230 202 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 VGLL4Q14135 290 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 DOCK1Q14185 1865 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 MVPQ14764 893 aaKnown RBP10.71□□□□□ -0.69
RFX3-209ENST00000451859 FOCADQ5VW36 1801 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 CDC42EP5Q6NZY7 148 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 PI16Q6UXB8 463 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 PANK1Q8TE04 598 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 R3HDMLQ9H3Y0 253 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 CSADQ9Y600 493 aa10.71□□□□□ -0.69
RFX3-209ENST00000451859 IGF2BP3O00425 579 aaKnown RBP eCLIP10.7□□□□□ -0.7
RFX3-209ENST00000451859 SEMA3EO15041 775 aa10.7□□□□□ -0.7
RFX3-209ENST00000451859 ZBTB48P10074 688 aaPredicted RBP10.7□□□□□ -0.7
RFX3-209ENST00000451859 NFIAQ12857 509 aa10.7□□□□□ -0.7
RFX3-209ENST00000451859 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
RFX3-209ENST00000451859 MIGA2Q7L4E1 593 aa10.7□□□□□ -0.7
RFX3-209ENST00000451859 ZNF296Q8WUU4 475 aaPredicted RBP10.7□□□□□ -0.7
RFX3-209ENST00000451859 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
RFX3-209ENST00000451859 USP40Q9NVE5 1235 aa10.7□□□□□ -0.7
RFX3-209ENST00000451859 SALL1Q9NSC2 1324 aa10.69□□□□□ -0.7
RFX3-209ENST00000451859 MYH1P12882 1939 aa10.69□□□□□ -0.7
RFX3-209ENST00000451859 GPR25O00155 361 aa10.69□□□□□ -0.7
RFX3-209ENST00000451859 SURF6O75683 361 aaKnown RBP10.69□□□□□ -0.7
RFX3-209ENST00000451859 MAP3K9P80192 1104 aa10.69□□□□□ -0.7
RFX3-209ENST00000451859 ADGRD1Q6QNK2 874 aa10.69□□□□□ -0.7
RFX3-209ENST00000451859 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
RFX3-209ENST00000451859 CTU1Q7Z7A3 348 aaKnown RBP10.69□□□□□ -0.7
RFX3-209ENST00000451859 FAM83AQ86UY5 434 aa10.69□□□□□ -0.7
RFX3-209ENST00000451859 ZGPATQ8N5A5 531 aaKnown RBP10.69□□□□□ -0.7
RFX3-209ENST00000451859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.69□□□□□ -0.7
RFX3-209ENST00000451859 ZKSCAN4Q969J2 545 aaPredicted RBP10.69□□□□□ -0.7
RFX3-209ENST00000451859 MRIQ9BWK5 157 aa10.69□□□□□ -0.7
RFX3-209ENST00000451859 PHIPQ8WWQ0 1821 aa10.69□□□□□ -0.7
RFX3-209ENST00000451859 RPAP1Q9BWH6 1393 aaPredicted RBP10.68□□□□□ -0.7
RFX3-209ENST00000451859 ATP8B2P98198 1209 aa10.68□□□□□ -0.7
RFX3-209ENST00000451859 FKBP1CQ5VVH2 108 aa10.68□□□□□ -0.7
RFX3-209ENST00000451859 DCAF15Q66K64 600 aa10.68□□□□□ -0.7
RFX3-209ENST00000451859 SPTY2D1Q68D10 685 aaPredicted RBP10.68□□□□□ -0.7
RFX3-209ENST00000451859 ERICH6Q7L0X2 663 aa10.68□□□□□ -0.7
RFX3-209ENST00000451859 ZNF341Q9BYN7 854 aa10.68□□□□□ -0.7
RFX3-209ENST00000451859 BCL11AQ9H165 835 aa10.68□□□□□ -0.7
RFX3-209ENST00000451859 SNRKQ9NRH2 765 aa10.68□□□□□ -0.7
RFX3-209ENST00000451859 HMG20BQ9P0W2 317 aa10.68□□□□□ -0.7
RFX3-209ENST00000451859 MGAMO43451 1857 aa10.68□□□□□ -0.7
RFX3-209ENST00000451859 CENPFP49454 3210 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 MYH7P12883 1935 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 CCL15-CCL14A0A0B4J2E2 113 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 UNCXA6NJT0 531 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 ZBTB7BO15156 539 aaPredicted RBP10.67□□□□□ -0.7
RFX3-209ENST00000451859 FKTNO75072 461 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 ALDH1A1P00352 501 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 MCAMP43121 646 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 BTDP43251 543 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 RGS3P49796 1198 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 INHBEP58166 350 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 MECOMQ03112 1051 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 CRHR2Q13324 411 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 PICALMQ13492 652 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 CCL15Q16663 113 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 TNNI3KQ59H18 835 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 TTC39AQ5SRH9 613 aa10.67□□□□□ -0.7
RFX3-209ENST00000451859 ZSCAN29Q8IWY8 852 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms