RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.86□□□□□ -0.51
USP54-207ENST00000451492 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
USP54-207ENST00000451492 DDTLA6NHG4 134 aaPredicted RBP11.85□□□□□ -0.51
USP54-207ENST00000451492 SPDYE5A6NIY4 337 aa11.85□□□□□ -0.51
USP54-207ENST00000451492 FAM196BA6NMK8 535 aa11.85□□□□□ -0.51
USP54-207ENST00000451492 WDHD1O75717 1129 aaPredicted RBP11.85□□□□□ -0.51
USP54-207ENST00000451492 ALDH1A1P00352 501 aa11.85□□□□□ -0.51
USP54-207ENST00000451492 CYP2E1P05181 493 aaPredicted RBP11.85□□□□□ -0.51
USP54-207ENST00000451492 NAA16Q6N069 864 aaPredicted RBP11.85□□□□□ -0.51
USP54-207ENST00000451492 CTU1Q7Z7A3 348 aaKnown RBP11.85□□□□□ -0.51
USP54-207ENST00000451492 ERC1Q8IUD2 1116 aa11.85□□□□□ -0.51
USP54-207ENST00000451492 TEX11Q8IYF3 940 aa11.85□□□□□ -0.51
USP54-207ENST00000451492 PTPN18Q99952 460 aa11.85□□□□□ -0.51
USP54-207ENST00000451492 PIH1D3Q9NQM4 214 aaKnown RBP11.85□□□□□ -0.51
USP54-207ENST00000451492 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
USP54-207ENST00000451492 GPR75-ASB3A0A0A6YYF3 556 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 IRF6O14896 467 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 FKTNO75072 461 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 HMMRO75330 724 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 ENTPD3O75355 529 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 IDH1O75874 414 aaKnown RBP11.84□□□□□ -0.51
USP54-207ENST00000451492 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
USP54-207ENST00000451492 LDHCP07864 332 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 GTF2A2P52657 109 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 INHBEP58166 350 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 RHBDL3P58872 404 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 CRHR2Q13324 411 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 TAF1CQ15572 869 aaPredicted RBP11.84□□□□□ -0.51
USP54-207ENST00000451492 SLC4A8Q2Y0W8 1093 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 OTUD7BQ6GQQ9 843 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 SH3BP5LQ7L8J4 393 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 ERO1BQ86YB8 467 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 RHPN1Q8TCX5 695 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 SH3RF3Q8TEJ3 882 aaPredicted RBP11.84□□□□□ -0.51
USP54-207ENST00000451492 BRI3BPQ8WY22 251 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 IDI2Q9BXS1 227 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 ZBTB40Q9NUA8 1239 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.84□□□□□ -0.51
USP54-207ENST00000451492 MYH8P13535 1937 aa11.84□□□□□ -0.51
USP54-207ENST00000451492 ATRNL1Q5VV63 1379 aa11.83□□□□□ -0.52
USP54-207ENST00000451492 ZBTB22O15209 634 aa11.83□□□□□ -0.52
USP54-207ENST00000451492 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
USP54-207ENST00000451492 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
USP54-207ENST00000451492 RPAP2Q8IXW5 612 aaPredicted RBP11.83□□□□□ -0.52
USP54-207ENST00000451492 CD99L2Q8TCZ2 262 aa11.83□□□□□ -0.52
USP54-207ENST00000451492 FAM163AQ96GL9 167 aaPredicted RBP11.83□□□□□ -0.52
USP54-207ENST00000451492 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
USP54-207ENST00000451492 ANTXR1Q9H6X2 564 aa11.83□□□□□ -0.52
USP54-207ENST00000451492 IFIT2P09913 472 aaKnown RBP11.82□□□□□ -0.52
USP54-207ENST00000451492 DYNLL1P63167 89 aaKnown RBP11.82□□□□□ -0.52
USP54-207ENST00000451492 PPIL2Q13356 520 aa11.82□□□□□ -0.52
USP54-207ENST00000451492 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
USP54-207ENST00000451492 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
USP54-207ENST00000451492 CLASRPQ8N2M8 674 aaKnown RBP11.82□□□□□ -0.52
USP54-207ENST00000451492 FAM43AQ8N2R8 423 aa11.82□□□□□ -0.52
USP54-207ENST00000451492 MIGA1Q8NAN2 632 aa11.82□□□□□ -0.52
USP54-207ENST00000451492 KIF1BPQ96EK5 621 aa11.82□□□□□ -0.52
USP54-207ENST00000451492 DNAJC2Q99543 621 aaKnown RBP11.82□□□□□ -0.52
USP54-207ENST00000451492 OSBPL5Q9H0X9 879 aaPredicted RBP11.82□□□□□ -0.52
USP54-207ENST00000451492 CHMP4BQ9H444 224 aaKnown RBP11.82□□□□□ -0.52
USP54-207ENST00000451492 DDX60LQ5H9U9 1706 aaKnown RBP11.82□□□□□ -0.52
USP54-207ENST00000451492 MGAMO43451 1857 aa11.82□□□□□ -0.52
USP54-207ENST00000451492 TESPA1A2RU30 521 aaPredicted RBP11.81□□□□□ -0.52
USP54-207ENST00000451492 BTBD19C9JJ37 291 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 CETPP11597 493 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 CYP7A1P22680 504 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 SOX10P56693 466 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 PPATQ06203 517 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 SNAPC2Q13487 334 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 MAGEB6Q8N7X4 407 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 CFHR5Q9BXR6 569 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP54-207ENST00000451492 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
USP54-207ENST00000451492 ZNF112Q9UJU3 913 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 TRIM17Q9Y577 477 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 LOC285556D6RIA3 1793 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 CENPFP49454 3210 aa11.81□□□□□ -0.52
USP54-207ENST00000451492 HTTP42858 3142 aa11.8□□□□□ -0.52
USP54-207ENST00000451492 BAZ2AQ9UIF9 1905 aaKnown RBP11.8□□□□□ -0.52
USP54-207ENST00000451492 SMARCA5O60264 1052 aaPredicted RBP11.8□□□□□ -0.52
USP54-207ENST00000451492 BAG3O95817 575 aa11.8□□□□□ -0.52
USP54-207ENST00000451492 NOL9Q5SY16 702 aaKnown RBP11.8□□□□□ -0.52
USP54-207ENST00000451492 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
USP54-207ENST00000451492 ZNF512BQ96KM6 892 aaPredicted RBP11.8□□□□□ -0.52
USP54-207ENST00000451492 PICK1Q9NRD5 415 aa11.8□□□□□ -0.52
USP54-207ENST00000451492 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
USP54-207ENST00000451492 COL2A1P02458 1487 aaPredicted RBP11.8□□□□□ -0.52
USP54-207ENST00000451492 FLT1P17948 1338 aa11.8□□□□□ -0.52
USP54-207ENST00000451492 PHF20L1A8MW92 1017 aa11.79□□□□□ -0.52
USP54-207ENST00000451492 GOLIM4O00461 696 aa11.79□□□□□ -0.52
USP54-207ENST00000451492 GADL1Q6ZQY3 521 aa11.79□□□□□ -0.52
USP54-207ENST00000451492 EDC3Q96F86 508 aaKnown RBP11.79□□□□□ -0.52
USP54-207ENST00000451492 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
USP54-207ENST00000451492 ZHX2Q9Y6X8 837 aa11.79□□□□□ -0.52
USP54-207ENST00000451492 TNRC18O15417 2968 aaPredicted RBP11.79□□□□□ -0.52
USP54-207ENST00000451492 TRIM75PA6NK02 468 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms