RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 RGMBQ6NW40 437 aa17.4■□□□□ 0.38
COL3A1-203ENST00000450867 MOB2Q70IA6 237 aa17.4■□□□□ 0.38
COL3A1-203ENST00000450867 TEX11Q8IYF3 940 aa17.4■□□□□ 0.38
COL3A1-203ENST00000450867 SH3RF3Q8TEJ3 882 aaPredicted RBP17.4■□□□□ 0.38
COL3A1-203ENST00000450867 CAPNS2Q96L46 248 aa17.4■□□□□ 0.38
COL3A1-203ENST00000450867 RIOK1Q9BRS2 568 aaKnown RBP17.4■□□□□ 0.38
COL3A1-203ENST00000450867 ZNF532Q9HCE3 1301 aa17.4■□□□□ 0.38
COL3A1-203ENST00000450867 FAM155AB1AL88 458 aaPredicted RBP17.39■□□□□ 0.37
COL3A1-203ENST00000450867 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.37
COL3A1-203ENST00000450867 ZSCAN25Q6NSZ9 544 aa17.39■□□□□ 0.37
COL3A1-203ENST00000450867 SH3BP5LQ7L8J4 393 aa17.39■□□□□ 0.37
COL3A1-203ENST00000450867 TICAM2Q86XR7 235 aa17.39■□□□□ 0.37
COL3A1-203ENST00000450867 ZFPM1Q8IX07 1006 aa17.39■□□□□ 0.37
COL3A1-203ENST00000450867 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
COL3A1-203ENST00000450867 DOCK1Q14185 1865 aa17.38■□□□□ 0.37
COL3A1-203ENST00000450867 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
COL3A1-203ENST00000450867 SLC10A3P09131 477 aa17.38■□□□□ 0.37
COL3A1-203ENST00000450867 IREB2P48200 963 aaKnown RBP17.38■□□□□ 0.37
COL3A1-203ENST00000450867 DYNLL1P63167 89 aaKnown RBP17.38■□□□□ 0.37
COL3A1-203ENST00000450867 TCP10Q12799 353 aa17.38■□□□□ 0.37
COL3A1-203ENST00000450867 CYP4F22Q6NT55 531 aa17.38■□□□□ 0.37
COL3A1-203ENST00000450867 PLEKHM2Q8IWE5 1019 aa17.38■□□□□ 0.37
COL3A1-203ENST00000450867 CCDC102AQ96A19 550 aa17.38■□□□□ 0.37
COL3A1-203ENST00000450867 OSBPL5Q9H0X9 879 aaPredicted RBP17.38■□□□□ 0.37
COL3A1-203ENST00000450867 ANGEL1Q9UNK9 670 aaKnown RBP17.38■□□□□ 0.37
COL3A1-203ENST00000450867 BAZ2AQ9UIF9 1905 aaKnown RBP17.38■□□□□ 0.37
COL3A1-203ENST00000450867 ATAD5Q96QE3 1844 aa17.37■□□□□ 0.37
COL3A1-203ENST00000450867 TTLL12Q14166 644 aaPredicted RBP17.37■□□□□ 0.37
COL3A1-203ENST00000450867 DCAF15Q66K64 600 aa17.37■□□□□ 0.37
COL3A1-203ENST00000450867 RASAL3Q86YV0 1011 aa17.37■□□□□ 0.37
COL3A1-203ENST00000450867 MIGA1Q8NAN2 632 aa17.37■□□□□ 0.37
COL3A1-203ENST00000450867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL3A1-203ENST00000450867 ZNF112Q9UJU3 913 aa17.37■□□□□ 0.37
COL3A1-203ENST00000450867 FLT1P17948 1338 aa17.37■□□□□ 0.37
COL3A1-203ENST00000450867 DDTLA6NHG4 134 aaPredicted RBP17.36■□□□□ 0.37
COL3A1-203ENST00000450867 ZFYP08048 801 aaPredicted RBP17.36■□□□□ 0.37
COL3A1-203ENST00000450867 MAP2K2P36507 400 aa17.36■□□□□ 0.37
COL3A1-203ENST00000450867 ZNF157P51786 506 aaPredicted RBP17.36■□□□□ 0.37
COL3A1-203ENST00000450867 NOGQ13253 232 aa17.36■□□□□ 0.37
COL3A1-203ENST00000450867 PICALMQ13492 652 aa17.36■□□□□ 0.37
COL3A1-203ENST00000450867 ANKRD13AQ8IZ07 590 aa17.36■□□□□ 0.37
COL3A1-203ENST00000450867 CSRNP1Q96S65 589 aa17.36■□□□□ 0.37
COL3A1-203ENST00000450867 FZD1Q9UP38 647 aa17.36■□□□□ 0.37
COL3A1-203ENST00000450867 PHIPQ8WWQ0 1821 aa17.35■□□□□ 0.37
COL3A1-203ENST00000450867 MAGEB6P1A0A0J9YX57 407 aa17.35■□□□□ 0.37
COL3A1-203ENST00000450867 TBC1D12O60347 775 aa17.35■□□□□ 0.37
COL3A1-203ENST00000450867 PRKG1Q13976 671 aa17.35■□□□□ 0.37
COL3A1-203ENST00000450867 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.35■□□□□ 0.37
COL3A1-203ENST00000450867 METTL16Q86W50 562 aaKnown RBP17.35■□□□□ 0.37
COL3A1-203ENST00000450867 ZNF341Q9BYN7 854 aa17.35■□□□□ 0.37
COL3A1-203ENST00000450867 DHX36Q9H2U1 1008 aaKnown RBP17.35■□□□□ 0.37
COL3A1-203ENST00000450867 RNF113AO15541 343 aaKnown RBP17.34■□□□□ 0.37
COL3A1-203ENST00000450867 PTPRFP10586 1907 aa17.34■□□□□ 0.37
COL3A1-203ENST00000450867 MYH8P13535 1937 aa17.34■□□□□ 0.37
COL3A1-203ENST00000450867 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
COL3A1-203ENST00000450867 LRRFIP1Q32MZ4 808 aaKnown RBP17.34■□□□□ 0.37
COL3A1-203ENST00000450867 TGFBRAP1Q8WUH2 860 aa17.34■□□□□ 0.37
COL3A1-203ENST00000450867 CHGBP05060 677 aa17.33■□□□□ 0.36
COL3A1-203ENST00000450867 PDE4AP27815 886 aa17.33■□□□□ 0.36
COL3A1-203ENST00000450867 SLFNL1Q499Z3 407 aa17.33■□□□□ 0.36
COL3A1-203ENST00000450867 MAPKAPK5Q8IW41 473 aa17.33■□□□□ 0.36
COL3A1-203ENST00000450867 LCORLQ8N3X6 602 aa17.33■□□□□ 0.36
COL3A1-203ENST00000450867 APPBP2Q92624 585 aa17.33■□□□□ 0.36
COL3A1-203ENST00000450867 EVI5LQ96CN4 794 aa17.33■□□□□ 0.36
COL3A1-203ENST00000450867 CLMNQ96JQ2 1002 aa17.33■□□□□ 0.36
COL3A1-203ENST00000450867 CRNKL1Q9BZJ0 848 aaKnown RBP17.33■□□□□ 0.36
COL3A1-203ENST00000450867 PHF20L1A8MW92 1017 aa17.32■□□□□ 0.36
COL3A1-203ENST00000450867 ZBTB48P10074 688 aaPredicted RBP17.32■□□□□ 0.36
COL3A1-203ENST00000450867 VGLL4Q14135 290 aa17.32■□□□□ 0.36
COL3A1-203ENST00000450867 NOL9Q5SY16 702 aaKnown RBP17.32■□□□□ 0.36
COL3A1-203ENST00000450867 ERICH6BQ5W0A0 696 aa17.32■□□□□ 0.36
COL3A1-203ENST00000450867 PAXIP1Q6ZW49 1069 aaPredicted RBP17.32■□□□□ 0.36
COL3A1-203ENST00000450867 CENPQQ7L2Z9 268 aaPredicted RBP17.32■□□□□ 0.36
COL3A1-203ENST00000450867 ZSCAN29Q8IWY8 852 aaPredicted RBP17.32■□□□□ 0.36
COL3A1-203ENST00000450867 PUS7LQ9H0K6 701 aaKnown RBP17.32■□□□□ 0.36
COL3A1-203ENST00000450867 AOC2O75106 756 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 MBD4O95243 580 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 NEFLP07196 543 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 ZMYM1Q5SVZ6 1142 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 SPRYD7Q5W111 196 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 MIGA2Q7L4E1 593 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
COL3A1-203ENST00000450867 OSBP2Q969R2 916 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 SLC10A4Q96EP9 437 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 WRNIP1Q96S55 665 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 ARMT1Q9H993 441 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 PI4KBQ9UBF8 816 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 HERC5Q9UII4 1024 aaKnown RBP17.31■□□□□ 0.36
COL3A1-203ENST00000450867 SNCAIPQ9Y6H5 919 aa17.31■□□□□ 0.36
COL3A1-203ENST00000450867 USP5P45974 858 aa17.3■□□□□ 0.36
COL3A1-203ENST00000450867 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
COL3A1-203ENST00000450867 WNK4Q96J92 1243 aa17.3■□□□□ 0.36
COL3A1-203ENST00000450867 ZIC5Q96T25 663 aa17.3■□□□□ 0.36
COL3A1-203ENST00000450867 EHD4Q9H223 541 aa17.3■□□□□ 0.36
COL3A1-203ENST00000450867 DCP1AQ9NPI6 582 aaPredicted RBP17.3■□□□□ 0.36
COL3A1-203ENST00000450867 ATP8A2Q9NTI2 1148 aa17.3■□□□□ 0.36
COL3A1-203ENST00000450867 WBP1LQ9NX94 342 aa17.3■□□□□ 0.36
COL3A1-203ENST00000450867 TAOK2Q9UL54 1235 aa17.3■□□□□ 0.36
COL3A1-203ENST00000450867 CSADQ9Y600 493 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms