RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SSH3Q8TE77 659 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 MAP4K1Q92918 833 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 POLR3EQ9NVU0 708 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 BSDC1Q9NW68 430 aaPredicted RBP9.81□□□□□ -0.84
LSM5-208ENST00000450169 ABCC6O95255 1503 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 MAP3K5Q99683 1374 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 EIF3HO15372 352 aaKnown RBP eCLIP9.81□□□□□ -0.84
LSM5-208ENST00000450169 MYL5Q02045 173 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 TBC1D8BQ0IIM8 1120 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 PTGDRQ13258 359 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 MTX1Q13505 466 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 ILDR1Q86SU0 546 aaPredicted RBP9.81□□□□□ -0.84
LSM5-208ENST00000450169 OTUD6BQ8N6M0 293 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 RETREG2Q8NC44 543 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 NLRP7Q8WX94 980 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 RIN2Q8WYP3 895 aaPredicted RBP9.81□□□□□ -0.84
LSM5-208ENST00000450169 CAPS2Q9BXY5 557 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 LZTFL1Q9NQ48 299 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 PCDHA7Q9UN72 937 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 EMILIN1Q9Y6C2 1016 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 ATP7BP35670 1465 aa9.81□□□□□ -0.84
LSM5-208ENST00000450169 A0A1B0GUA9 196 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 A0A1W2PQ27 194 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 A0A1W2PQ64 194 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 A0A1W2PQD8 194 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 CTAGE9A4FU28 777 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 GOLGA6CA6NDK9 693 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 GOLGA6DP0CG33 693 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 PIP4K2BP78356 416 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 PPFIA1Q13136 1202 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 TBX2Q13207 712 aaPredicted RBP9.8□□□□□ -0.84
LSM5-208ENST00000450169 STIM1Q13586 685 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 ZKSCAN8Q15776 578 aaPredicted RBP9.8□□□□□ -0.84
LSM5-208ENST00000450169 ADALQ6DHV7 355 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 B4GALNT4Q76KP1 1039 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 TC2NQ8N9U0 490 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 RABEP2Q9H5N1 569 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 GOLGA6AQ9NYA3 693 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 GRIN2DO15399 1336 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 USP42Q9H9J4 1324 aaKnown RBP9.8□□□□□ -0.84
LSM5-208ENST00000450169 ZC3H4Q9UPT8 1303 aaKnown RBP9.8□□□□□ -0.84
LSM5-208ENST00000450169 RTN2O75298 545 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 UBTFL1P0CB47 393 aaPredicted RBP9.8□□□□□ -0.84
LSM5-208ENST00000450169 GGCXP38435 758 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 ADKP55263 362 aaKnown RBP9.8□□□□□ -0.84
LSM5-208ENST00000450169 ATP2B2Q01814 1243 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 WHAMMP3Q1A5X7 153 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 NBPF9Q3BBW0 867 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 MCM10Q7L590 875 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 SIL1Q9H173 461 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 EHD4Q9H223 541 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 FANCLQ9NW38 375 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 SAMM50Q9Y512 469 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 SPATA31D1Q6ZQQ2 1576 aa9.8□□□□□ -0.84
LSM5-208ENST00000450169 MAP2P11137 1827 aaKnown RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 ANKRD33BA6NCL7 494 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 MEFVO15553 781 aaPredicted RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 MYO1BO43795 1136 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 PFKFB2O60825 505 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 ARHGAP25P42331 645 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 CCNHP51946 323 aaPredicted RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 FOSBP53539 338 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 CLNS1AP54105 237 aaKnown RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 MDM2Q00987 491 aaPredicted RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 GRIK3Q13003 919 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 SH3D19Q5HYK7 790 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 ZNF569Q5MCW4 686 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 CEP85LQ5SZL2 805 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.79□□□□□ -0.84
LSM5-208ENST00000450169 NOA1Q8NC60 698 aaKnown RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 COG1Q8WTW3 980 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 CCDC97Q96F63 343 aaPredicted RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 KLC4Q9NSK0 619 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 NPHP4O75161 1426 aaPredicted RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 ZNF202O95125 648 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 TFRCP02786 760 aaKnown RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 CD44P16070 742 aaKnown RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 MCM3P25205 808 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 GNGT1P63211 74 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 AP1ARQ63HQ0 302 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 SPATS2Q86XZ4 545 aaKnown RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 CCDC148Q8NFR7 591 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 ZNF483Q8TF39 744 aaPredicted RBP9.79□□□□□ -0.84
LSM5-208ENST00000450169 CRACR2AQ9BSW2 395 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 TRAIPQ9BWF2 469 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 TAF6LQ9Y6J9 622 aa9.79□□□□□ -0.84
LSM5-208ENST00000450169 SMTNP53814 917 aa9.78□□□□□ -0.84
LSM5-208ENST00000450169 AKAP17AQ02040 695 aaKnown RBP9.78□□□□□ -0.84
LSM5-208ENST00000450169 MTF1Q14872 753 aa9.78□□□□□ -0.84
LSM5-208ENST00000450169 SPECC1LQ69YQ0 1117 aa9.78□□□□□ -0.84
LSM5-208ENST00000450169 PPP1R42Q7Z4L9 355 aa9.78□□□□□ -0.84
LSM5-208ENST00000450169 ARHGEF25Q86VW2 580 aa9.78□□□□□ -0.84
LSM5-208ENST00000450169 ANKRD18AQ8IVF6 992 aa9.78□□□□□ -0.84
LSM5-208ENST00000450169 SMARCC2Q8TAQ2 1214 aa9.78□□□□□ -0.84
LSM5-208ENST00000450169 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
LSM5-208ENST00000450169 ETAA1Q9NY74 926 aa9.78□□□□□ -0.84
LSM5-208ENST00000450169 MPHOSPH10O00566 681 aaKnown RBP9.77□□□□□ -0.84
LSM5-208ENST00000450169 NDUFAB1O14561 156 aa9.77□□□□□ -0.84
LSM5-208ENST00000450169 IBSPP21815 317 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms