RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 NUTM1Q86Y26 1132 aa10.09□□□□□ -0.79
NPHP1-208ENST00000449600 METTL22Q9BUU2 404 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-208ENST00000449600 CFHR5Q9BXR6 569 aa10.09□□□□□ -0.79
NPHP1-208ENST00000449600 COL25A1Q9BXS0 654 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-208ENST00000449600 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
NPHP1-208ENST00000449600 LAMB4A4D0S4 1761 aa10.09□□□□□ -0.79
NPHP1-208ENST00000449600 UBR2Q8IWV8 1755 aa10.09□□□□□ -0.79
NPHP1-208ENST00000449600 H0YGN5 161 aa10.08□□□□□ -0.8
NPHP1-208ENST00000449600 PIP4K2AP48426 406 aaPredicted RBP10.08□□□□□ -0.8
NPHP1-208ENST00000449600 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
NPHP1-208ENST00000449600 BEND3Q5T5X7 828 aa10.08□□□□□ -0.8
NPHP1-208ENST00000449600 LARGE2Q8N3Y3 721 aa10.08□□□□□ -0.8
NPHP1-208ENST00000449600 MEIS3Q99687 375 aa10.08□□□□□ -0.8
NPHP1-208ENST00000449600 MYD88Q99836 296 aa10.08□□□□□ -0.8
NPHP1-208ENST00000449600 VPS33BQ9H267 617 aa10.08□□□□□ -0.8
NPHP1-208ENST00000449600 PRO3102Q9H379 93 aa10.08□□□□□ -0.8
NPHP1-208ENST00000449600 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
NPHP1-208ENST00000449600 SPTBN5Q9NRC6 3674 aaKnown RBP10.08□□□□□ -0.8
NPHP1-208ENST00000449600 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
NPHP1-208ENST00000449600 NPHP1O15259 732 aa10.07□□□□□ -0.8
NPHP1-208ENST00000449600 IL6STP40189 918 aaPredicted RBP10.07□□□□□ -0.8
NPHP1-208ENST00000449600 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
NPHP1-208ENST00000449600 USP48Q86UV5 1035 aa10.07□□□□□ -0.8
NPHP1-208ENST00000449600 ANKRD44Q8N8A2 993 aa10.07□□□□□ -0.8
NPHP1-208ENST00000449600 BAP1Q92560 729 aa10.07□□□□□ -0.8
NPHP1-208ENST00000449600 GRM8O00222 908 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 CAMTA2O94983 1202 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 IGHDP01880 384 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 TIMP2P16035 220 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 EN2P19622 333 aaPredicted RBP10.06□□□□□ -0.8
NPHP1-208ENST00000449600 GMPSP49915 693 aaPredicted RBP10.06□□□□□ -0.8
NPHP1-208ENST00000449600 CXCL9Q07325 125 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 KCNH2Q12809 1159 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 NNTQ13423 1086 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 MRPL14Q6P1L8 145 aaKnown RBP10.06□□□□□ -0.8
NPHP1-208ENST00000449600 RASAL3Q86YV0 1011 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 NIM1KQ8IY84 436 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 ZNF511Q8NB15 262 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 ARMC5Q96C12 935 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 KLF16Q9BXK1 252 aaPredicted RBP10.06□□□□□ -0.8
NPHP1-208ENST00000449600 ZBTB3Q9H5J0 574 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 PAPPA2Q9BXP8 1791 aa10.06□□□□□ -0.8
NPHP1-208ENST00000449600 FKTNO75072 461 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 TBC1D8O95759 1140 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 VARSP26640 1264 aaKnown RBP10.05□□□□□ -0.8
NPHP1-208ENST00000449600 TM4SF4P48230 202 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 CRY2Q49AN0 593 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 HSP90AB4PQ58FF6 505 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 NBPF5PQ86XG9 351 aaPredicted RBP10.05□□□□□ -0.8
NPHP1-208ENST00000449600 DZIP3Q86Y13 1208 aaKnown RBP10.05□□□□□ -0.8
NPHP1-208ENST00000449600 CCDC191Q8NCU4 936 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 TRPM4Q8TD43 1214 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 USP44Q9H0E7 712 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 CWC25Q9NXE8 425 aaPredicted RBP10.05□□□□□ -0.8
NPHP1-208ENST00000449600 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 ZNF652Q9Y2D9 606 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
NPHP1-208ENST00000449600 MAP3K15Q6ZN16 1313 aa10.05□□□□□ -0.8
NPHP1-208ENST00000449600 A0A1W2PPC1 479 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 ERVV-1B6SEH8 477 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 ATP8B2P98198 1209 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 GCKRQ14397 625 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 CEP85Q6P2H3 762 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 CLEC4GQ6UXB4 293 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 DLK2Q6UY11 383 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 TTLL7Q6ZT98 887 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 KRT26Q7Z3Y9 468 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 SPIRE2Q8WWL2 714 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 PRDM6Q9NQX0 595 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 ZNRF3Q9ULT6 936 aa10.04□□□□□ -0.8
NPHP1-208ENST00000449600 IBTKQ9P2D0 1353 aaPredicted RBP10.03□□□□□ -0.8
NPHP1-208ENST00000449600 ATP5J2-PTCD1G3V325 749 aa10.03□□□□□ -0.8
NPHP1-208ENST00000449600 HSP90B1P14625 803 aaKnown RBP10.03□□□□□ -0.8
NPHP1-208ENST00000449600 RGS3P49796 1198 aa10.03□□□□□ -0.8
NPHP1-208ENST00000449600 TCIRG1Q13488 830 aa10.03□□□□□ -0.8
NPHP1-208ENST00000449600 CWF19L2Q2TBE0 894 aaKnown RBP10.03□□□□□ -0.8
NPHP1-208ENST00000449600 ANKRD45Q5TZF3 282 aa10.03□□□□□ -0.8
NPHP1-208ENST00000449600 TPTE2Q6XPS3 522 aa10.03□□□□□ -0.8
NPHP1-208ENST00000449600 LRP10Q7Z4F1 713 aa10.03□□□□□ -0.8
NPHP1-208ENST00000449600 KIAA0100Q14667 2235 aaKnown RBP10.03□□□□□ -0.8
NPHP1-208ENST00000449600 SOBPA7XYQ1 873 aa10.02□□□□□ -0.81
NPHP1-208ENST00000449600 IGKV5-2P06315 115 aa10.02□□□□□ -0.81
NPHP1-208ENST00000449600 NDUFV2P19404 249 aa10.02□□□□□ -0.81
NPHP1-208ENST00000449600 HOXA10P31260 410 aaPredicted RBP10.02□□□□□ -0.81
NPHP1-208ENST00000449600 FKBP1BP68106 108 aa10.02□□□□□ -0.81
NPHP1-208ENST00000449600 OS9Q13438 667 aaPredicted RBP10.02□□□□□ -0.81
NPHP1-208ENST00000449600 DESI1Q6ICB0 168 aa10.02□□□□□ -0.81
NPHP1-208ENST00000449600 GIGYF2Q6Y7W6 1299 aaKnown RBP10.02□□□□□ -0.81
NPHP1-208ENST00000449600 SMC5Q8IY18 1101 aa10.02□□□□□ -0.81
NPHP1-208ENST00000449600 PURBQ96QR8 312 aaKnown RBP10.02□□□□□ -0.81
NPHP1-208ENST00000449600 DCTPP1Q9H773 170 aa10.02□□□□□ -0.81
NPHP1-208ENST00000449600 MOXD2PA6NHM9 499 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 SRGAP3O43295 1099 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 PPIP5K2O43314 1243 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 RAB11FIP3O75154 756 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 ADH1CP00326 375 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 NBPF7P0C2Y1 421 aaPredicted RBP10.01□□□□□ -0.81
NPHP1-208ENST00000449600 TRIM28Q13263 835 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms