RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 FGAP02671 866 aa8.11□□□□□ -1.11
BEST1-202ENST00000449131 TUBB4AP04350 444 aa8.11□□□□□ -1.11
BEST1-202ENST00000449131 CYP21A2P08686 494 aa8.11□□□□□ -1.11
BEST1-202ENST00000449131 UBXN1Q04323 297 aa8.11□□□□□ -1.11
BEST1-202ENST00000449131 HLTFQ14527 1009 aaKnown RBP eCLIP8.11□□□□□ -1.11
BEST1-202ENST00000449131 SPATA5Q8NB90 893 aa8.11□□□□□ -1.11
BEST1-202ENST00000449131 ZNF274Q96GC6 653 aaPredicted RBP8.11□□□□□ -1.11
BEST1-202ENST00000449131 C8orf37Q96NL8 207 aa8.11□□□□□ -1.11
BEST1-202ENST00000449131 NYXQ9GZU5 481 aa8.11□□□□□ -1.11
BEST1-202ENST00000449131 C6orf50Q9HD87 102 aa8.11□□□□□ -1.11
BEST1-202ENST00000449131 ZNF215Q9UL58 517 aaPredicted RBP8.11□□□□□ -1.11
BEST1-202ENST00000449131 DENND2AQ9ULE3 1009 aa8.11□□□□□ -1.11
BEST1-202ENST00000449131 NEFHP12036 1026 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 CCT6AP40227 531 aaKnown RBP8.1□□□□□ -1.11
BEST1-202ENST00000449131 ST5P78524 1137 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 ZNF569Q5MCW4 686 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 CCDC24Q8N4L8 307 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 GUCA1BQ9UMX6 200 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 MAPK8IP1Q9UQF2 711 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 RTCBQ9Y3I0 505 aaKnown RBP8.1□□□□□ -1.11
BEST1-202ENST00000449131 TNNI2P48788 182 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 ZNF804AQ7Z570 1209 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 SPAG5Q96R06 1193 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 LRRC27Q9C0I9 530 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 CLTCQ00610 1675 aaKnown RBP8.1□□□□□ -1.11
BEST1-202ENST00000449131 GLI2P10070 1586 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 CTAGE9A4FU28 777 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 SASH1O94885 1247 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 USP8P40818 1118 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 NLRP12P59046 1061 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 SCRN1Q12765 414 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 ERCC6LQ2NKX8 1250 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 ADALQ6DHV7 355 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 PI4K2BQ8TCG2 481 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 STAMQ92783 540 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 PRDM4Q9UKN5 801 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 NFE2L3Q9Y4A8 694 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 VWDEQ8N2E2 1590 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 NLRP1Q9C000 1473 aa8.1□□□□□ -1.11
BEST1-202ENST00000449131 SF3B2Q13435 895 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 POLA2Q14181 598 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 CTR9Q6PD62 1173 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 PIK3AP1Q6ZUJ8 805 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 EHBP1Q8NDI1 1231 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 ANKRD2Q9GZV1 360 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 VPS16Q9H269 839 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 RABEP2Q9H5N1 569 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 RBM28Q9NW13 759 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 TFCP2L1Q9NZI6 479 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 CALCOCO1Q9P1Z2 691 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 CPSF1Q10570 1443 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 AKR1B15C9JRZ8 316 aaPredicted RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 ADORA1P30542 326 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 HIBADHP31937 336 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 RRP36Q96EU6 259 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 FEZ1Q99689 392 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 HINFPQ9BQA5 517 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 IL25Q9H293 177 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 SLAIN2Q9P270 581 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 LUC7L2Q9Y383 392 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 GNPATO15228 680 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 RHOXF2BP0C7M4 288 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 PDIA3P30101 505 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 PRPF4BQ13523 1007 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 LETM2Q2VYF4 491 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 LONRF3Q496Y0 759 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 AKNAD1Q5T1N1 836 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 KRT79Q5XKE5 535 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 CMTR1Q8N1G2 835 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 IGSF22Q8N9C0 903 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 CACTINQ8WUQ7 758 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 CCDC42Q96M95 316 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 RHOXF2Q9BQY4 288 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 CARD6Q9BX69 1037 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 XPO4Q9C0E2 1151 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 KIAA1468Q9P260 1216 aa8.09□□□□□ -1.11
BEST1-202ENST00000449131 SAP30BPQ9UHR5 308 aaKnown RBP8.09□□□□□ -1.11
BEST1-202ENST00000449131 PDE6AP16499 860 aa8.09□□□□□ -1.12
BEST1-202ENST00000449131 ARID5AQ03989 594 aa8.09□□□□□ -1.12
BEST1-202ENST00000449131 WWC2Q6AWC2 1192 aa8.09□□□□□ -1.12
BEST1-202ENST00000449131 GOLGA1Q92805 767 aa8.09□□□□□ -1.12
BEST1-202ENST00000449131 NAA15Q9BXJ9 866 aaKnown RBP8.09□□□□□ -1.12
BEST1-202ENST00000449131 ZC3H12CQ9C0D7 883 aaKnown RBP8.09□□□□□ -1.12
BEST1-202ENST00000449131 GJB4Q9NTQ9 266 aa8.09□□□□□ -1.12
BEST1-202ENST00000449131 CCDC87Q9NVE4 849 aa8.09□□□□□ -1.12
BEST1-202ENST00000449131 AATFQ9NY61 560 aaKnown RBP eCLIP8.09□□□□□ -1.12
BEST1-202ENST00000449131 BCCIPQ9P287 314 aaKnown RBP eCLIP8.09□□□□□ -1.12
BEST1-202ENST00000449131 NEXMIFQ5QGS0 1516 aa8.08□□□□□ -1.12
BEST1-202ENST00000449131 DEPDC5O75140 1603 aa8.08□□□□□ -1.12
BEST1-202ENST00000449131 ALKQ9UM73 1620 aa8.08□□□□□ -1.12
BEST1-202ENST00000449131 SHTN1A0MZ66 631 aa8.08□□□□□ -1.12
BEST1-202ENST00000449131 TBCAO75347 108 aaKnown RBP8.08□□□□□ -1.12
BEST1-202ENST00000449131 CHGBP05060 677 aa8.08□□□□□ -1.12
BEST1-202ENST00000449131 ERCC3P19447 782 aa8.08□□□□□ -1.12
BEST1-202ENST00000449131 GNA11P29992 359 aa8.08□□□□□ -1.12
BEST1-202ENST00000449131 CTSWP56202 376 aa8.08□□□□□ -1.12
BEST1-202ENST00000449131 TRMT44Q8IYL2 757 aaKnown RBP8.08□□□□□ -1.12
BEST1-202ENST00000449131 ERO1AQ96HE7 468 aa8.08□□□□□ -1.12
BEST1-202ENST00000449131 CCDC113Q9H0I3 377 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms