RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 INPP5BP32019 993 aa17.21■□□□□ 0.35
RTFDC1-204ENST00000449062 SREBF2Q12772 1141 aa17.21■□□□□ 0.35
RTFDC1-204ENST00000449062 DCAF15Q66K64 600 aa17.21■□□□□ 0.35
RTFDC1-204ENST00000449062 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
RTFDC1-204ENST00000449062 OPTNQ96CV9 577 aa17.21■□□□□ 0.35
RTFDC1-204ENST00000449062 ZNF341Q9BYN7 854 aa17.21■□□□□ 0.35
RTFDC1-204ENST00000449062 NDUFB9Q9Y6M9 179 aa17.21■□□□□ 0.35
RTFDC1-204ENST00000449062 CASP8AP2Q9UKL3 1982 aa17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 SPDYE5A6NIY4 337 aa17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 TBC1D8O95759 1140 aa17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 SLURP2P0DP57 97 aa17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 NOM1Q5C9Z4 860 aaKnown RBP17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 NAA16Q6N069 864 aaPredicted RBP17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 IFNL1Q8IU54 200 aa17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 WRNIP1Q96S55 665 aa17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.2■□□□□ 0.34
RTFDC1-204ENST00000449062 ERO1BQ86YB8 467 aa17.19■□□□□ 0.34
RTFDC1-204ENST00000449062 SH3RF3Q8TEJ3 882 aaPredicted RBP17.19■□□□□ 0.34
RTFDC1-204ENST00000449062 CSADQ9Y600 493 aa17.19■□□□□ 0.34
RTFDC1-204ENST00000449062 TBC1D12O60347 775 aa17.18■□□□□ 0.34
RTFDC1-204ENST00000449062 NOL9Q5SY16 702 aaKnown RBP17.18■□□□□ 0.34
RTFDC1-204ENST00000449062 BRI3BPQ8WY22 251 aa17.18■□□□□ 0.34
RTFDC1-204ENST00000449062 ALDH1A1P00352 501 aa17.17■□□□□ 0.34
RTFDC1-204ENST00000449062 IFIT2P09913 472 aaKnown RBP17.17■□□□□ 0.34
RTFDC1-204ENST00000449062 ATP5JP18859 108 aa17.17■□□□□ 0.34
RTFDC1-204ENST00000449062 PICALMQ13492 652 aa17.17■□□□□ 0.34
RTFDC1-204ENST00000449062 AATFQ9NY61 560 aaKnown RBP eCLIP17.17■□□□□ 0.34
RTFDC1-204ENST00000449062 GPR25O00155 361 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 IRF6O14896 467 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 SMARCA5O60264 1052 aaPredicted RBP17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 BAG3O95817 575 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 CYP7A1P22680 504 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 GTF2A2P52657 109 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 PPATQ06203 517 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 PPIL2Q13356 520 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 TMED8Q6PL24 325 aaPredicted RBP17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 TEX11Q8IYF3 940 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 OTUD5Q96G74 571 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 LRRCC1Q9C099 1032 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 OSBPL5Q9H0X9 879 aaPredicted RBP17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 OTOFQ9HC10 1997 aa17.16■□□□□ 0.34
RTFDC1-204ENST00000449062 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
RTFDC1-204ENST00000449062 DYNLL1P63167 89 aaKnown RBP17.15■□□□□ 0.34
RTFDC1-204ENST00000449062 METTL16Q86W50 562 aaKnown RBP17.15■□□□□ 0.34
RTFDC1-204ENST00000449062 ZNF296Q8WUU4 475 aaPredicted RBP17.15■□□□□ 0.34
RTFDC1-204ENST00000449062 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
RTFDC1-204ENST00000449062 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
RTFDC1-204ENST00000449062 COL2A1P02458 1487 aaPredicted RBP17.14■□□□□ 0.33
RTFDC1-204ENST00000449062 PLCG2P16885 1265 aa17.14■□□□□ 0.33
RTFDC1-204ENST00000449062 MAP3K12Q12852 859 aa17.14■□□□□ 0.33
RTFDC1-204ENST00000449062 MOGSQ13724 837 aa17.14■□□□□ 0.33
RTFDC1-204ENST00000449062 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.33
RTFDC1-204ENST00000449062 MAGEB6Q8N7X4 407 aa17.14■□□□□ 0.33
RTFDC1-204ENST00000449062 EDC3Q96F86 508 aaKnown RBP17.14■□□□□ 0.33
RTFDC1-204ENST00000449062 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
RTFDC1-204ENST00000449062 MYO5AQ9Y4I1 1855 aaKnown RBP17.14■□□□□ 0.33
RTFDC1-204ENST00000449062 CCL15-CCL14A0A0B4J2E2 113 aa17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 TCRBV5S4A2TA0A5A2 114 aa17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 CTNND1O60716 968 aaKnown RBP17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 RRP1BQ14684 758 aaKnown RBP17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 TTF1Q15361 905 aaPredicted RBP17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 CCL15Q16663 113 aa17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 FAM43AQ8N2R8 423 aa17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 TGFBRAP1Q8WUH2 860 aa17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 ABHD8Q96I13 439 aa17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 HAUS7Q99871 368 aa17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 RIOK1Q9BRS2 568 aaKnown RBP17.13■□□□□ 0.33
RTFDC1-204ENST00000449062 LAMB1P07942 1786 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 GOLIM4O00461 696 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 CETPP11597 493 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 PDE6AP16499 860 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 PTPRAP18433 802 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 CRHR2Q13324 411 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 SNAPC2Q13487 334 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 OTUD7BQ6GQQ9 843 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 DHX36Q9H2U1 1008 aaKnown RBP17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 BOLA2Q9H3K6 86 aa17.12■□□□□ 0.33
RTFDC1-204ENST00000449062 BTBD19C9JJ37 291 aa17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 CXCL11O14625 94 aa17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 DGKZQ13574 1117 aa17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 SLC9C2Q5TAH2 1124 aa17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 FOXP4Q8IVH2 680 aaPredicted RBP17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 SCYL3Q8IZE3 742 aa17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 MIGA1Q8NAN2 632 aa17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 NOL10Q9BSC4 688 aaKnown RBP17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 PI4KBQ9UBF8 816 aa17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 FLT1P17948 1338 aa17.11■□□□□ 0.33
RTFDC1-204ENST00000449062 AK9Q5TCS8 1911 aa17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 FAM196BA6NMK8 535 aa17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 FKTNO75072 461 aa17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 CTU1Q7Z7A3 348 aaKnown RBP17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 DNAJC2Q99543 621 aaKnown RBP17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 BCL11AQ9H165 835 aa17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 ZCCHC17Q9NP64 241 aaKnown RBP17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 PAG1Q9NWQ8 432 aa17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 PALD1Q9ULE6 856 aa17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 AFG3L2Q9Y4W6 797 aa17.1■□□□□ 0.33
RTFDC1-204ENST00000449062 ZHX2Q9Y6X8 837 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms