RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 KRT40Q6A162 431 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 BARGINQ6ZT62 677 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 DRC7Q8IY82 874 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 IGDCC4Q8TDY8 1250 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 SHISA4Q96DD7 197 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 GJD4Q96KN9 370 aaPredicted RBP4.87□□□□□ -1.63
LMBR1-212ENST00000448926 CBX8Q9HC52 389 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 SLC12A7Q9Y666 1083 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 CICQ96RK0 1608 aaPredicted RBP4.87□□□□□ -1.63
LMBR1-212ENST00000448926 EPB41L2O43491 1005 aaKnown RBP4.87□□□□□ -1.63
LMBR1-212ENST00000448926 WDHD1O75717 1129 aaPredicted RBP4.87□□□□□ -1.63
LMBR1-212ENST00000448926 RBM10P98175 930 aaKnown RBP4.87□□□□□ -1.63
LMBR1-212ENST00000448926 UBE3CQ15386 1083 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 EARS2Q5JPH6 523 aaKnown RBP4.87□□□□□ -1.63
LMBR1-212ENST00000448926 TRAPPC3LQ5T215 181 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 MAPKAPK5Q8IW41 473 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 TMEM87AQ8NBN3 555 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 STAMQ92783 540 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 SMARCC1Q92922 1105 aaPredicted RBP4.87□□□□□ -1.63
LMBR1-212ENST00000448926 SCAF8Q9UPN6 1271 aaKnown RBP4.87□□□□□ -1.63
LMBR1-212ENST00000448926 THRAP3Q9Y2W1 955 aaKnown RBP4.87□□□□□ -1.63
LMBR1-212ENST00000448926 PCDHAC2Q9Y5I4 1007 aa4.87□□□□□ -1.63
LMBR1-212ENST00000448926 GOLGA8HP0CJ92 632 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 PTGS1P23219 599 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 GOLGA8FQ08AF8 430 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 GOLGA8DPQ0D2H9 430 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 TTF1Q15361 905 aaPredicted RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 ZNF827Q17R98 1081 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 DOK7Q18PE1 504 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 CAVIN4Q5BKX8 364 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 AKNAD1Q5T1N1 836 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 USP49Q70CQ1 688 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 CNBD1Q8NA66 436 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 RASGRP4Q8TDF6 673 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 PPP1R9BQ96SB3 815 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 FUCA2Q9BTY2 467 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 KCNQ5Q9NR82 932 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 NARFQ9UHQ1 456 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 TNKSO95271 1327 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 SALL1Q9NSC2 1324 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 BTAF1O14981 1849 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 WNK3Q9BYP7 1800 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 USP17L3A6NCW0 530 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 USP17L4A6NCW7 530 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 RAD21O60216 631 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 RPS6KA4O75676 772 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 HMGB1P09429 215 aaKnown RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 HIBADHP31937 336 aaKnown RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 CACNB3P54284 484 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 GPSM2P81274 684 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 PICALMQ13492 652 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 WTAPQ15007 396 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 USP17L1Q7RTZ2 530 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 NBPF11Q86T75 865 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 SH3RF3Q8TEJ3 882 aaPredicted RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 SDF4Q9BRK5 362 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 CDCA7Q9BWT1 371 aaPredicted RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 PDGFDQ9GZP0 370 aaPredicted RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 PYCARDQ9ULZ3 195 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 ZNF804BA4D1E1 1349 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 C4AP0C0L4 1744 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 C6orf229H3BNL8 230 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 UFL1O94874 794 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 CDC25AP30304 524 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 TM4SF1P30408 202 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 IARSP41252 1262 aaKnown RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 KIF23Q02241 960 aaPredicted RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 ZRSR1Q15695 479 aaKnown RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 SHROOM1Q2M3G4 852 aaPredicted RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 DNTTIP2Q5QJE6 756 aaKnown RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 MYSM1Q5VVJ2 828 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 PRR5LQ6MZQ0 368 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 ZSCAN25Q6NSZ9 544 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 TPTE2Q6XPS3 522 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 ZSCAN30Q86W11 494 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 DZIP1Q86YF9 867 aaKnown RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 FBXO18Q8NFZ0 1043 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 TGFBRAP1Q8WUH2 860 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 GPKOWQ92917 476 aaPredicted RBP eCLIP4.86□□□□□ -1.632e-6■■□□□ 13
LMBR1-212ENST00000448926 ZNF274Q96GC6 653 aaPredicted RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 AGXT2Q9BYV1 514 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 SCAND2PQ9GZW5 306 aaPredicted RBP4.86□□□□□ -1.63
LMBR1-212ENST00000448926 MCM9Q9NXL9 1143 aa4.86□□□□□ -1.63
LMBR1-212ENST00000448926 TNRC6CQ9HCJ0 1690 aaKnown RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 FAM196BA6NMK8 535 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 CCDC192P0DO97 292 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 ZNF165P49910 485 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 SCNN1DP51172 638 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 DDR1Q08345 913 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 SNW1Q13573 536 aaKnown RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 ENAHQ8N8S7 591 aaPredicted RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 RIOK1Q9BRS2 568 aaKnown RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 UBAC1Q9BSL1 405 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 TRIM5Q9C035 493 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 CLSTN2Q9H4D0 955 aa4.85□□□□□ -1.63
LMBR1-212ENST00000448926 BSDC1Q9NW68 430 aaPredicted RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 ISY1Q9ULR0 285 aaKnown RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 V9GY48 417 aaPredicted RBP4.85□□□□□ -1.63
LMBR1-212ENST00000448926 PNOCQ13519 176 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms