RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 C17orf99Q6UX52 265 aa16.94■□□□□ 0.3
PDLIM2-213ENST00000448520 IDI2Q9BXS1 227 aa16.94■□□□□ 0.3
PDLIM2-213ENST00000448520 PDS5AQ29RF7 1337 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-213ENST00000448520 RBBP6Q7Z6E9 1792 aaKnown RBP16.93■□□□□ 0.3
PDLIM2-213ENST00000448520 TIMM10P62072 90 aa16.93■□□□□ 0.3
PDLIM2-213ENST00000448520 SLC4A8Q2Y0W8 1093 aa16.93■□□□□ 0.3
PDLIM2-213ENST00000448520 ZBTB40Q9NUA8 1239 aa16.93■□□□□ 0.3
PDLIM2-213ENST00000448520 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
PDLIM2-213ENST00000448520 PDHXO00330 501 aa16.92■□□□□ 0.3
PDLIM2-213ENST00000448520 ABCF2Q9UG63 623 aa16.92■□□□□ 0.3
PDLIM2-213ENST00000448520 MKI67P46013 3256 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-213ENST00000448520 GAKO14976 1311 aa16.92■□□□□ 0.3
PDLIM2-213ENST00000448520 SRGAP3O43295 1099 aa16.91■□□□□ 0.3
PDLIM2-213ENST00000448520 ADORA1P30542 326 aa16.91■□□□□ 0.3
PDLIM2-213ENST00000448520 MAP3K10Q02779 954 aa16.91■□□□□ 0.3
PDLIM2-213ENST00000448520 MTX1Q13505 466 aa16.91■□□□□ 0.3
PDLIM2-213ENST00000448520 DZIP1Q86YF9 867 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-213ENST00000448520 ZFPM1Q8IX07 1006 aa16.91■□□□□ 0.3
PDLIM2-213ENST00000448520 XAGE2Q96GT9 111 aa16.91■□□□□ 0.3
PDLIM2-213ENST00000448520 PICK1Q9NRD5 415 aa16.91■□□□□ 0.3
PDLIM2-213ENST00000448520 A0A1B0GUL7 405 aa16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 PHF20L1A8MW92 1017 aa16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 PSMC4P43686 418 aa16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 RGS3P49796 1198 aa16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 FASTKD5Q7L8L6 764 aaKnown RBP16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 ARHGAP39Q9C0H5 1083 aa16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 CPA4Q9UI42 421 aa16.9■□□□□ 0.3
PDLIM2-213ENST00000448520 MAP4K4O95819 1239 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-213ENST00000448520 MOGSQ13724 837 aa16.89■□□□□ 0.29
PDLIM2-213ENST00000448520 SCYL3Q8IZE3 742 aa16.89■□□□□ 0.29
PDLIM2-213ENST00000448520 PARK7Q99497 189 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-213ENST00000448520 SRRDQ9UH36 339 aa16.89■□□□□ 0.29
PDLIM2-213ENST00000448520 PCDHB15Q9Y5E8 787 aa16.89■□□□□ 0.29
PDLIM2-213ENST00000448520 ZHX2Q9Y6X8 837 aa16.89■□□□□ 0.29
PDLIM2-213ENST00000448520 CTNND1O60716 968 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-213ENST00000448520 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-213ENST00000448520 FMNL1O95466 1100 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-213ENST00000448520 GNAI2P04899 355 aa16.88■□□□□ 0.29
PDLIM2-213ENST00000448520 LDHCP07864 332 aa16.88■□□□□ 0.29
PDLIM2-213ENST00000448520 TFCP2Q12800 502 aa16.88■□□□□ 0.29
PDLIM2-213ENST00000448520 SH3TC2Q8TF17 1288 aa16.88■□□□□ 0.29
PDLIM2-213ENST00000448520 NEUROD6Q96NK8 337 aa16.88■□□□□ 0.29
PDLIM2-213ENST00000448520 GPR75-ASB3A0A0A6YYF3 556 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 TBC1D12O60347 775 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 PTPRAP18433 802 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 BTDP43251 543 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 GSTO1P78417 241 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 GPAT2Q6NUI2 795 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 RAET1EQ8TD07 263 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 TRIM47Q96LD4 638 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 SLC45A1Q9Y2W3 748 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 AFG3L2Q9Y4W6 797 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 ADGRA2Q96PE1 1338 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 ATRNL1Q5VV63 1379 aa16.87■□□□□ 0.29
PDLIM2-213ENST00000448520 A0A0G2JLL6 359 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-213ENST00000448520 OSBPP22059 807 aa16.86■□□□□ 0.29
PDLIM2-213ENST00000448520 MECOMQ03112 1051 aa16.86■□□□□ 0.29
PDLIM2-213ENST00000448520 G3BP1Q13283 466 aaKnown RBP eCLIP16.86■□□□□ 0.29
PDLIM2-213ENST00000448520 SH3BP5LQ7L8J4 393 aa16.86■□□□□ 0.29
PDLIM2-213ENST00000448520 PRRT2Q7Z6L0 340 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-213ENST00000448520 NKX2-3Q8TAU0 364 aa16.86■□□□□ 0.29
PDLIM2-213ENST00000448520 BRCA2P51587 3418 aa16.86■□□□□ 0.29
PDLIM2-213ENST00000448520 MROH7-TTC4A0A0A0MT08 1334 aa16.86■□□□□ 0.29
PDLIM2-213ENST00000448520 PNMA6EA0A0J9YXQ4 647 aa16.85■□□□□ 0.29
PDLIM2-213ENST00000448520 DDTLA6NHG4 134 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-213ENST00000448520 BCRP11274 1271 aa16.85■□□□□ 0.29
PDLIM2-213ENST00000448520 CTGFP29279 349 aa16.85■□□□□ 0.29
PDLIM2-213ENST00000448520 GRK4P32298 578 aa16.85■□□□□ 0.29
PDLIM2-213ENST00000448520 FCGRTP55899 365 aa16.85■□□□□ 0.29
PDLIM2-213ENST00000448520 HABP4Q5JVS0 413 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-213ENST00000448520 CEP85Q6P2H3 762 aa16.85■□□□□ 0.29
PDLIM2-213ENST00000448520 SIRT2Q8IXJ6 389 aa16.85■□□□□ 0.29
PDLIM2-213ENST00000448520 MYCP01106 439 aaPredicted RBP16.84■□□□□ 0.29
PDLIM2-213ENST00000448520 UQCRFS1P1P0C7P4 283 aa16.84■□□□□ 0.29
PDLIM2-213ENST00000448520 RHBDL3P58872 404 aa16.84■□□□□ 0.29
PDLIM2-213ENST00000448520 PICALMQ13492 652 aa16.84■□□□□ 0.29
PDLIM2-213ENST00000448520 SPATA5Q8NB90 893 aa16.84■□□□□ 0.29
PDLIM2-213ENST00000448520 CHMP4BQ9H444 224 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-213ENST00000448520 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-213ENST00000448520 HMG20BQ9P0W2 317 aa16.84■□□□□ 0.29
PDLIM2-213ENST00000448520 MYPNQ86TC9 1320 aa16.84■□□□□ 0.29
PDLIM2-213ENST00000448520 ECM2O94769 699 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-213ENST00000448520 CYP2C8P10632 490 aa16.83■□□□□ 0.28
PDLIM2-213ENST00000448520 UBXN2AP68543 259 aa16.83■□□□□ 0.28
PDLIM2-213ENST00000448520 RFX7Q2KHR2 1363 aa16.83■□□□□ 0.28
PDLIM2-213ENST00000448520 GADL1Q6ZQY3 521 aa16.83■□□□□ 0.28
PDLIM2-213ENST00000448520 NSUN4Q96CB9 384 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-213ENST00000448520 TBC1D2Q9BYX2 928 aa16.83■□□□□ 0.28
PDLIM2-213ENST00000448520 DOCK2Q92608 1830 aa16.82■□□□□ 0.28
PDLIM2-213ENST00000448520 ARID4AP29374 1257 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-213ENST00000448520 ATP8B2P98198 1209 aa16.82■□□□□ 0.28
PDLIM2-213ENST00000448520 MTFR1Q15390 333 aa16.82■□□□□ 0.28
PDLIM2-213ENST00000448520 OSBPL5Q9H0X9 879 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-213ENST00000448520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.82■□□□□ 0.28
PDLIM2-213ENST00000448520 RAI14Q9P0K7 980 aa16.82■□□□□ 0.28
PDLIM2-213ENST00000448520 BIN2Q9UBW5 565 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms