RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 CCDC136Q96JN2 1154 aa26.54■■□□□ 1.84
APOE-204ENST00000446996 ATRNL1Q5VV63 1379 aa26.54■■□□□ 1.84
APOE-204ENST00000446996 RNF113AO15541 343 aaKnown RBP26.53■■□□□ 1.84
APOE-204ENST00000446996 DCAF15Q66K64 600 aa26.53■■□□□ 1.84
APOE-204ENST00000446996 MIGA1Q8NAN2 632 aa26.53■■□□□ 1.84
APOE-204ENST00000446996 OSBPL5Q9H0X9 879 aaPredicted RBP26.53■■□□□ 1.84
APOE-204ENST00000446996 USP2O75604 605 aaPredicted RBP26.52■■□□□ 1.84
APOE-204ENST00000446996 PDE4AP27815 886 aa26.52■■□□□ 1.84
APOE-204ENST00000446996 IREB2P48200 963 aaKnown RBP26.52■■□□□ 1.84
APOE-204ENST00000446996 TTLL12Q14166 644 aaPredicted RBP26.52■■□□□ 1.84
APOE-204ENST00000446996 LDLRAD1Q5T700 205 aa26.52■■□□□ 1.84
APOE-204ENST00000446996 KLRG1Q96E93 195 aa26.52■■□□□ 1.84
APOE-204ENST00000446996 DHX36Q9H2U1 1008 aaKnown RBP26.52■■□□□ 1.84
APOE-204ENST00000446996 ECE1P42892 770 aa26.51■■□□□ 1.83
APOE-204ENST00000446996 MAP3K10Q02779 954 aa26.51■■□□□ 1.83
APOE-204ENST00000446996 PICALMQ13492 652 aa26.51■■□□□ 1.83
APOE-204ENST00000446996 RGMBQ6NW40 437 aa26.51■■□□□ 1.83
APOE-204ENST00000446996 ZFPM1Q8IX07 1006 aa26.51■■□□□ 1.83
APOE-204ENST00000446996 TGFBRAP1Q8WUH2 860 aa26.51■■□□□ 1.83
APOE-204ENST00000446996 APPBP2Q92624 585 aa26.51■■□□□ 1.83
APOE-204ENST00000446996 FSD1Q9BTV5 496 aa26.51■■□□□ 1.83
APOE-204ENST00000446996 ANGEL1Q9UNK9 670 aaKnown RBP26.51■■□□□ 1.83
APOE-204ENST00000446996 CDAN1Q8IWY9 1227 aa26.5■■□□□ 1.83
APOE-204ENST00000446996 CRNKL1Q9BZJ0 848 aaKnown RBP26.5■■□□□ 1.83
APOE-204ENST00000446996 FLT1P17948 1338 aa26.49■■□□□ 1.83
APOE-204ENST00000446996 SH3BP5LQ7L8J4 393 aa26.49■■□□□ 1.83
APOE-204ENST00000446996 PPP4R2Q9NY27 417 aa26.49■■□□□ 1.83
APOE-204ENST00000446996 DDTLA6NHG4 134 aaPredicted RBP26.48■■□□□ 1.83
APOE-204ENST00000446996 UBE2Q2LH0YL09 131 aa26.48■■□□□ 1.83
APOE-204ENST00000446996 TBC1D12O60347 775 aa26.48■■□□□ 1.83
APOE-204ENST00000446996 USP5P45974 858 aa26.48■■□□□ 1.83
APOE-204ENST00000446996 ZSCAN29Q8IWY8 852 aaPredicted RBP26.48■■□□□ 1.83
APOE-204ENST00000446996 CCDC102AQ96A19 550 aa26.48■■□□□ 1.83
APOE-204ENST00000446996 CSRNP1Q96S65 589 aa26.48■■□□□ 1.83
APOE-204ENST00000446996 ZNF341Q9BYN7 854 aa26.48■■□□□ 1.83
APOE-204ENST00000446996 MKRN1Q9UHC7 482 aaKnown RBP26.48■■□□□ 1.83
APOE-204ENST00000446996 MYH1P12882 1939 aa26.47■■□□□ 1.83
APOE-204ENST00000446996 PRKG1Q13976 671 aa26.47■■□□□ 1.83
APOE-204ENST00000446996 MOB2Q70IA6 237 aa26.47■■□□□ 1.83
APOE-204ENST00000446996 ANKRD13AQ8IZ07 590 aa26.47■■□□□ 1.83
APOE-204ENST00000446996 AIDAQ96BJ3 306 aa26.47■■□□□ 1.83
APOE-204ENST00000446996 PUS7LQ9H0K6 701 aaKnown RBP26.47■■□□□ 1.83
APOE-204ENST00000446996 TRIM6-TRIM34B2RNG4 842 aa26.46■■□□□ 1.83
APOE-204ENST00000446996 MBD4O95243 580 aa26.46■■□□□ 1.83
APOE-204ENST00000446996 MAPKAPK5Q8IW41 473 aa26.46■■□□□ 1.83
APOE-204ENST00000446996 LCORLQ8N3X6 602 aa26.46■■□□□ 1.83
APOE-204ENST00000446996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.46■■□□□ 1.832e-31■□□□□ 8.9
APOE-204ENST00000446996 ATP8A2Q9NTI2 1148 aa26.46■■□□□ 1.83
APOE-204ENST00000446996 PI4KBQ9UBF8 816 aa26.46■■□□□ 1.83
APOE-204ENST00000446996 ZNF112Q9UJU3 913 aa26.46■■□□□ 1.83
APOE-204ENST00000446996 WDR33Q9C0J8 1336 aaKnown RBP26.45■■□□□ 1.83
APOE-204ENST00000446996 VEGFBP49765 207 aa26.45■■□□□ 1.82
APOE-204ENST00000446996 ZNF157P51786 506 aaPredicted RBP26.45■■□□□ 1.82
APOE-204ENST00000446996 MAP3K9P80192 1104 aa26.45■■□□□ 1.82
APOE-204ENST00000446996 SLFNL1Q499Z3 407 aa26.45■■□□□ 1.82
APOE-204ENST00000446996 ZMYM1Q5SVZ6 1142 aa26.45■■□□□ 1.82
APOE-204ENST00000446996 FOXP4Q8IVH2 680 aaPredicted RBP26.45■■□□□ 1.82
APOE-204ENST00000446996 OSBP2Q969R2 916 aa26.45■■□□□ 1.82
APOE-204ENST00000446996 CAPNS2Q96L46 248 aa26.45■■□□□ 1.82
APOE-204ENST00000446996 ARMT1Q9H993 441 aa26.45■■□□□ 1.82
APOE-204ENST00000446996 CHGBP05060 677 aa26.44■■□□□ 1.82
APOE-204ENST00000446996 TTC22Q5TAA0 569 aa26.44■■□□□ 1.82
APOE-204ENST00000446996 METTL16Q86W50 562 aaKnown RBP26.44■■□□□ 1.82
APOE-204ENST00000446996 STRBPQ96SI9 672 aaKnown RBP26.44■■□□□ 1.82
APOE-204ENST00000446996 HERC5Q9UII4 1024 aaKnown RBP26.44■■□□□ 1.82
APOE-204ENST00000446996 SLC10A3P09131 477 aa26.43■■□□□ 1.82
APOE-204ENST00000446996 GNAT2P19087 354 aa26.43■■□□□ 1.82
APOE-204ENST00000446996 CYP4F22Q6NT55 531 aa26.43■■□□□ 1.82
APOE-204ENST00000446996 MIGA2Q7L4E1 593 aa26.43■■□□□ 1.82
APOE-204ENST00000446996 JMYQ8N9B5 988 aa26.43■■□□□ 1.82
APOE-204ENST00000446996 RILPL2Q969X0 211 aa26.43■■□□□ 1.82
APOE-204ENST00000446996 TAOK2Q9UL54 1235 aa26.43■■□□□ 1.82
APOE-204ENST00000446996 FZD1Q9UP38 647 aa26.43■■□□□ 1.82
APOE-204ENST00000446996 HLA-DOAP06340 250 aa26.42■■□□□ 1.82
APOE-204ENST00000446996 MAP2K2P36507 400 aa26.42■■□□□ 1.82
APOE-204ENST00000446996 NOGQ13253 232 aa26.42■■□□□ 1.82
APOE-204ENST00000446996 PAXIP1Q6ZW49 1069 aaPredicted RBP26.42■■□□□ 1.82
APOE-204ENST00000446996 TTC6Q86TZ1 520 aa26.42■■□□□ 1.82
APOE-204ENST00000446996 SLC10A4Q96EP9 437 aa26.42■■□□□ 1.82
APOE-204ENST00000446996 DCP1AQ9NPI6 582 aaPredicted RBP26.42■■□□□ 1.82
APOE-204ENST00000446996 HELLSQ9NRZ9 838 aa26.42■■□□□ 1.82
APOE-204ENST00000446996 OTOFQ9HC10 1997 aa26.42■■□□□ 1.82
APOE-204ENST00000446996 NAV1Q8NEY1 1877 aa26.41■■□□□ 1.82
APOE-204ENST00000446996 FAM155AB1AL88 458 aaPredicted RBP26.41■■□□□ 1.82
APOE-204ENST00000446996 HIP1O00291 1037 aa26.41■■□□□ 1.82
APOE-204ENST00000446996 GIMAP6Q6P9H5 292 aa26.41■■□□□ 1.82
APOE-204ENST00000446996 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.41■■□□□ 1.82
APOE-204ENST00000446996 CSADQ9Y600 493 aa26.41■■□□□ 1.82
APOE-204ENST00000446996 DDX60LQ5H9U9 1706 aaKnown RBP26.4■■□□□ 1.82
APOE-204ENST00000446996 GPAA1O43292 621 aa26.4■■□□□ 1.82
APOE-204ENST00000446996 RASAL3Q86YV0 1011 aa26.4■■□□□ 1.82
APOE-204ENST00000446996 DDRGK1Q96HY6 314 aa26.4■■□□□ 1.82
APOE-204ENST00000446996 WRNIP1Q96S55 665 aa26.4■■□□□ 1.82
APOE-204ENST00000446996 EHD4Q9H223 541 aa26.4■■□□□ 1.82
APOE-204ENST00000446996 PALD1Q9ULE6 856 aa26.4■■□□□ 1.82
APOE-204ENST00000446996 SLC4A4Q9Y6R1 1079 aa26.4■■□□□ 1.82
APOE-204ENST00000446996 THSD7BQ9C0I4 1608 aa26.39■■□□□ 1.82
APOE-204ENST00000446996 SIPA1L1O43166 1804 aa26.39■■□□□ 1.82
APOE-204ENST00000446996 PHF20L1A8MW92 1017 aa26.39■■□□□ 1.82
APOE-204ENST00000446996 NOL9Q5SY16 702 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms