RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 PSME4Q14997 1843 aa9.05□□□□□ -0.96
SF3A3P1-201ENST00000446317 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 BAG3O95817 575 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 CPA1P15085 419 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 SHROOM1Q2M3G4 852 aaPredicted RBP9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 LRRFIP1Q32MZ4 808 aaKnown RBP9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 MAP1SQ66K74 1059 aaPredicted RBP9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 HHIPL2Q6UWX4 724 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 SLF2Q8IX21 1173 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 SLC44A5Q8NCS7 719 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 NKX2-3Q8TAU0 364 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 BACH2Q9BYV9 841 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 TAF1DQ9H5J8 278 aaPredicted RBP9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 ZNF408Q9H9D4 720 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 ADARB2Q9NS39 739 aaKnown RBP9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 MCM9Q9NXL9 1143 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 TAOK2Q9UL54 1235 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 FLT1P17948 1338 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 MYH7P12883 1935 aa9.04□□□□□ -0.96
SF3A3P1-201ENST00000446317 RFX7Q2KHR2 1363 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 DDTLA6NHG4 134 aaPredicted RBP9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 USP17L21D6R901 530 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 TRAF5O00463 557 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 PRDM1O75626 825 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 POLR3DP05423 398 aaPredicted RBP9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 PLCD1P51178 756 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 RRP12Q5JTH9 1297 aaKnown RBP9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 MIGA2Q7L4E1 593 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 SH3BP5LQ7L8J4 393 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 USP48Q86UV5 1035 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 IFNL3Q8IZI9 196 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 DPF2Q92785 391 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 NAPBQ9H115 298 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 TOMM22Q9NS69 142 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 SUGT1Q9Y2Z0 365 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 TACC3Q9Y6A5 838 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 CNTNAP1P78357 1384 aa9.03□□□□□ -0.96
SF3A3P1-201ENST00000446317 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 MYO1BO43795 1136 aa9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 FGAP02671 866 aa9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 YY1P25490 414 aa9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 RASA3Q14644 834 aa9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 SPDYE2Q495Y8 402 aa9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 CTR9Q6PD62 1173 aa9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 TBC1D10CQ8IV04 446 aa9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 DCP1AQ9NPI6 582 aaPredicted RBP9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 TMOD2Q9NZR1 351 aa9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.02□□□□□ -0.96
SF3A3P1-201ENST00000446317 SLC27A2O14975 620 aa9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 PPP4CP60510 307 aa9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 NBPF12Q5TAG4 269 aaPredicted RBP9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 MOB2Q70IA6 237 aa9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 NOL8Q76FK4 1167 aaKnown RBP9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 CHST3Q7LGC8 479 aa9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 RASEFQ8IZ41 740 aa9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 ZBED3Q96IU2 234 aaPredicted RBP9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 TCEANC2Q96MN5 208 aa9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 USP26Q9BXU7 913 aa9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 NBPF3Q9H094 633 aa9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 OSBPL5Q9H0X9 879 aaPredicted RBP9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 GPBP1L1Q9HC44 474 aaPredicted RBP9.02□□□□□ -0.97
SF3A3P1-201ENST00000446317 RAD50Q92878 1312 aa9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 DTNBO60941 627 aa9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 HDLBPQ00341 1268 aaKnown RBP9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 FAM47AQ5JRC9 791 aa9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 CREB3L3Q68CJ9 461 aa9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 STOX1Q6ZVD7 989 aa9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 CCDC84Q86UT8 332 aaPredicted RBP9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 L3MBTL3Q96JM7 780 aaPredicted RBP9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 LRRC2Q9BYS8 371 aa9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 DEFB129Q9H1M3 183 aa9.01□□□□□ -0.97
SF3A3P1-201ENST00000446317 NEDD4P46934 1319 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 NAV1Q8NEY1 1877 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 IQCA1LA6NCM1 817 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 REC8O95072 547 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 GDF11O95390 407 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 CYP21A2P08686 494 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 VEGFAP15692 232 aaPredicted RBP9□□□□□ -0.97
SF3A3P1-201ENST00000446317 PLCG2P16885 1265 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 PPARAQ07869 468 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 ADCK5Q3MIX3 580 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 KRT26Q7Z3Y9 468 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 CLEC10AQ8IUN9 316 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 CRACR2BQ8N4Y2 399 aaPredicted RBP9□□□□□ -0.97
SF3A3P1-201ENST00000446317 MAP4K1Q92918 833 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 DCPSQ96C86 337 aaKnown RBP9□□□□□ -0.97
SF3A3P1-201ENST00000446317 DDRGK1Q96HY6 314 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 CSRNP1Q96S65 589 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 ZKSCAN3Q9BRR0 538 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 C22orf23Q9BZE7 217 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 NACAP1Q9BZK3 213 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 MTMR7Q9Y216 660 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 SNX14Q9Y5W7 946 aa9□□□□□ -0.97
SF3A3P1-201ENST00000446317 U3KPZ7 1027 aaPredicted RBP9□□□□□ -0.97
SF3A3P1-201ENST00000446317 MPHOSPH10O00566 681 aaKnown RBP8.99□□□□□ -0.97
SF3A3P1-201ENST00000446317 ZNF213O14771 459 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms