RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
SMARCAL1-210ENST00000445153 SRRDQ9UH36 339 aa17.6■□□□□ 0.41
SMARCAL1-210ENST00000445153 ZHX2Q9Y6X8 837 aa17.6■□□□□ 0.41
SMARCAL1-210ENST00000445153 MYH2Q9UKX2 1941 aa17.59■□□□□ 0.41
SMARCAL1-210ENST00000445153 CXCL11O14625 94 aa17.59■□□□□ 0.41
SMARCAL1-210ENST00000445153 SRGAP3O43295 1099 aa17.59■□□□□ 0.41
SMARCAL1-210ENST00000445153 PTPRAP18433 802 aa17.59■□□□□ 0.41
SMARCAL1-210ENST00000445153 SCYL3Q8IZE3 742 aa17.59■□□□□ 0.41
SMARCAL1-210ENST00000445153 FMNL1O95466 1100 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 BCRP11274 1271 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 BTDP43251 543 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 PRMT2P55345 433 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 RHBDL3P58872 404 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 MECOMQ03112 1051 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 MTX1Q13505 466 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 PI16Q6UXB8 463 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 CCDC84Q86UT8 332 aaPredicted RBP17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 ARHGAP45Q92619 1136 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 SHISA4Q96DD7 197 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 HDAC5Q9UQL6 1122 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 AFG3L2Q9Y4W6 797 aa17.58■□□□□ 0.4
SMARCAL1-210ENST00000445153 PDS5AQ29RF7 1337 aaKnown RBP17.57■□□□□ 0.4
SMARCAL1-210ENST00000445153 A0A0G2JLL6 359 aaPredicted RBP17.57■□□□□ 0.4
SMARCAL1-210ENST00000445153 PICALMQ13492 652 aa17.57■□□□□ 0.4
SMARCAL1-210ENST00000445153 TBC1D9Q6ZT07 1266 aa17.57■□□□□ 0.4
SMARCAL1-210ENST00000445153 PRRT2Q7Z6L0 340 aaPredicted RBP17.57■□□□□ 0.4
SMARCAL1-210ENST00000445153 DZIP1Q86YF9 867 aaKnown RBP17.57■□□□□ 0.4
SMARCAL1-210ENST00000445153 ZSCAN29Q8IWY8 852 aaPredicted RBP17.57■□□□□ 0.4
SMARCAL1-210ENST00000445153 ZGPATQ8N5A5 531 aaKnown RBP17.57■□□□□ 0.4
SMARCAL1-210ENST00000445153 HMG20BQ9P0W2 317 aa17.57■□□□□ 0.4
SMARCAL1-210ENST00000445153 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
SMARCAL1-210ENST00000445153 GPR75-ASB3A0A0A6YYF3 556 aa17.56■□□□□ 0.4
SMARCAL1-210ENST00000445153 NEUROD6Q96NK8 337 aa17.56■□□□□ 0.4
SMARCAL1-210ENST00000445153 GABRQQ9UN88 632 aa17.56■□□□□ 0.4
SMARCAL1-210ENST00000445153 DOCK2Q92608 1830 aa17.56■□□□□ 0.4
SMARCAL1-210ENST00000445153 MYPNQ86TC9 1320 aa17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 PNMA6EA0A0J9YXQ4 647 aa17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 FAM196BA6NMK8 535 aa17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 GNAI3P08754 354 aa17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 GRK4P32298 578 aa17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 PRKCZQ05513 592 aa17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 GADL1Q6ZQY3 521 aa17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 PARK7Q99497 189 aaKnown RBP17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 PICK1Q9NRD5 415 aa17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 COLQQ9Y215 455 aaPredicted RBP17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 AKAP2Q9Y2D5 859 aa17.55■□□□□ 0.4
SMARCAL1-210ENST00000445153 H0YGN5 161 aa17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 CTNND1O60716 968 aaKnown RBP17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 BCAR3O75815 825 aa17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 TRIM27P14373 513 aa17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 HOXD10P28358 340 aa17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 RRP1BQ14684 758 aaKnown RBP17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 MVPQ14764 893 aaKnown RBP17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 SPTY2D1Q68D10 685 aaPredicted RBP17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 ERICH6Q7L0X2 663 aa17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 FASTKD5Q7L8L6 764 aaKnown RBP17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 MIER1Q8N108 512 aa17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 RAET1EQ8TD07 263 aa17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 NSUN4Q96CB9 384 aaKnown RBP17.54■□□□□ 0.4
SMARCAL1-210ENST00000445153 TRIM75PA6NK02 468 aa17.53■□□□□ 0.4
SMARCAL1-210ENST00000445153 CCL5P13501 91 aa17.53■□□□□ 0.4
SMARCAL1-210ENST00000445153 FXR1P51114 621 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMARCAL1-210ENST00000445153 SLF2Q8IX21 1173 aa17.53■□□□□ 0.4
SMARCAL1-210ENST00000445153 SPATA5Q8NB90 893 aa17.53■□□□□ 0.4
SMARCAL1-210ENST00000445153 PHIPQ8WWQ0 1821 aa17.53■□□□□ 0.4
SMARCAL1-210ENST00000445153 TBC1D12O60347 775 aa17.52■□□□□ 0.4
SMARCAL1-210ENST00000445153 FCGRTP55899 365 aa17.52■□□□□ 0.4
SMARCAL1-210ENST00000445153 UBE2Q1Q7Z7E8 422 aa17.52■□□□□ 0.4
SMARCAL1-210ENST00000445153 CLUAP1Q96AJ1 413 aa17.52■□□□□ 0.4
SMARCAL1-210ENST00000445153 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
SMARCAL1-210ENST00000445153 GJB1P08034 283 aa17.51■□□□□ 0.39
SMARCAL1-210ENST00000445153 ARID4AP29374 1257 aaPredicted RBP17.51■□□□□ 0.39
SMARCAL1-210ENST00000445153 MCAMP43121 646 aa17.51■□□□□ 0.39
SMARCAL1-210ENST00000445153 GJA8P48165 433 aa17.51■□□□□ 0.39
SMARCAL1-210ENST00000445153 TREML2Q5T2D2 321 aa17.51■□□□□ 0.39
SMARCAL1-210ENST00000445153 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
SMARCAL1-210ENST00000445153 SLC45A1Q9Y2W3 748 aa17.51■□□□□ 0.39
SMARCAL1-210ENST00000445153 PTPRFP10586 1907 aa17.51■□□□□ 0.39
SMARCAL1-210ENST00000445153 DOCK1Q14185 1865 aa17.5■□□□□ 0.39
SMARCAL1-210ENST00000445153 GNAI2P04899 355 aa17.5■□□□□ 0.39
SMARCAL1-210ENST00000445153 FLT3LGP49771 235 aa17.5■□□□□ 0.39
SMARCAL1-210ENST00000445153 ATF7IPQ6VMQ6 1270 aa17.5■□□□□ 0.39
SMARCAL1-210ENST00000445153 RNF208Q9H0X6 261 aa17.5■□□□□ 0.39
SMARCAL1-210ENST00000445153 UNC93B1Q9H1C4 597 aa17.5■□□□□ 0.39
SMARCAL1-210ENST00000445153 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.5■□□□□ 0.396e-6■■■□□ 15.9
SMARCAL1-210ENST00000445153 BIN2Q9UBW5 565 aaPredicted RBP17.5■□□□□ 0.39
SMARCAL1-210ENST00000445153 MGAMO43451 1857 aa17.5■□□□□ 0.39
SMARCAL1-210ENST00000445153 ELNP15502 786 aa17.49■□□□□ 0.39
SMARCAL1-210ENST00000445153 SPP2Q13103 211 aa17.49■□□□□ 0.39
SMARCAL1-210ENST00000445153 GORABQ5T7V8 394 aa17.49■□□□□ 0.39
SMARCAL1-210ENST00000445153 OSBPL5Q9H0X9 879 aaPredicted RBP17.49■□□□□ 0.39
SMARCAL1-210ENST00000445153 RAI14Q9P0K7 980 aa17.49■□□□□ 0.39
SMARCAL1-210ENST00000445153 ADCY3O60266 1144 aa17.48■□□□□ 0.39
SMARCAL1-210ENST00000445153 LDHCP07864 332 aa17.48■□□□□ 0.39
SMARCAL1-210ENST00000445153 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMARCAL1-210ENST00000445153 ANKRD13CQ8N6S4 541 aa17.48■□□□□ 0.39
SMARCAL1-210ENST00000445153 SH3RF3Q8TEJ3 882 aaPredicted RBP17.48■□□□□ 0.39
SMARCAL1-210ENST00000445153 U2AF1L4Q8WU68 220 aaKnown RBP17.48■□□□□ 0.39
SMARCAL1-210ENST00000445153 SNRKQ9NRH2 765 aa17.48■□□□□ 0.39
SMARCAL1-210ENST00000445153 AGTPBP1Q9UPW5 1226 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms