RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 ZKSCAN4Q969J2 545 aaPredicted RBP16.49■□□□□ 0.23
GARNL3-208ENST00000444677 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
GARNL3-208ENST00000444677 RNF186Q9NXI6 227 aa16.49■□□□□ 0.23
GARNL3-208ENST00000444677 TRPA1O75762 1119 aa16.48■□□□□ 0.23
GARNL3-208ENST00000444677 CHGBP05060 677 aa16.48■□□□□ 0.23
GARNL3-208ENST00000444677 INPP5BP32019 993 aa16.48■□□□□ 0.23
GARNL3-208ENST00000444677 PPP4CP60510 307 aa16.48■□□□□ 0.23
GARNL3-208ENST00000444677 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
GARNL3-208ENST00000444677 ZSCAN29Q8IWY8 852 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-208ENST00000444677 MIGA1Q8NAN2 632 aa16.48■□□□□ 0.23
GARNL3-208ENST00000444677 OTUD7AQ8TE49 926 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-208ENST00000444677 WRNIP1Q96S55 665 aa16.48■□□□□ 0.23
GARNL3-208ENST00000444677 RPAP1Q9BWH6 1393 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-208ENST00000444677 ZNF341Q9BYN7 854 aa16.47■□□□□ 0.23
GARNL3-208ENST00000444677 SNCAIPQ9Y6H5 919 aa16.47■□□□□ 0.23
GARNL3-208ENST00000444677 OTOFQ9HC10 1997 aa16.47■□□□□ 0.23
GARNL3-208ENST00000444677 UNCXA6NJT0 531 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 BAG3O95817 575 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 DCAF15Q66K64 600 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 MAPKAPK5Q8IW41 473 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 TGFBRAP1Q8WUH2 860 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 OPTNQ96CV9 577 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 HAUS7Q99871 368 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 NOL10Q9BSC4 688 aaKnown RBP16.46■□□□□ 0.23
GARNL3-208ENST00000444677 PAG1Q9NWQ8 432 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 ZNF112Q9UJU3 913 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 ATRNL1Q5VV63 1379 aa16.46■□□□□ 0.23
GARNL3-208ENST00000444677 FAM196BA6NMK8 535 aa16.45■□□□□ 0.22
GARNL3-208ENST00000444677 IGHDP01880 384 aa16.45■□□□□ 0.22
GARNL3-208ENST00000444677 PDE6AP16499 860 aa16.45■□□□□ 0.22
GARNL3-208ENST00000444677 TM4SF4P48230 202 aa16.45■□□□□ 0.22
GARNL3-208ENST00000444677 HDAC1Q13547 482 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-208ENST00000444677 SLC9C2Q5TAH2 1124 aa16.45■□□□□ 0.22
GARNL3-208ENST00000444677 HOOK2Q96ED9 719 aa16.45■□□□□ 0.22
GARNL3-208ENST00000444677 OSBPL5Q9H0X9 879 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-208ENST00000444677 ECHDC1Q9NTX5 307 aa16.45■□□□□ 0.22
GARNL3-208ENST00000444677 NPM3O75607 178 aaKnown RBP16.44■□□□□ 0.22
GARNL3-208ENST00000444677 MAP4K4O95819 1239 aaPredicted RBP16.44■□□□□ 0.22
GARNL3-208ENST00000444677 TTF1Q15361 905 aaPredicted RBP16.44■□□□□ 0.22
GARNL3-208ENST00000444677 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
GARNL3-208ENST00000444677 OTUD5Q96G74 571 aa16.44■□□□□ 0.22
GARNL3-208ENST00000444677 R3HDMLQ9H3Y0 253 aa16.44■□□□□ 0.22
GARNL3-208ENST00000444677 CSADQ9Y600 493 aa16.44■□□□□ 0.22
GARNL3-208ENST00000444677 ZNF532Q9HCE3 1301 aa16.44■□□□□ 0.22
GARNL3-208ENST00000444677 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
GARNL3-208ENST00000444677 PHF20L1A8MW92 1017 aa16.43■□□□□ 0.22
GARNL3-208ENST00000444677 IGSF3O75054 1194 aa16.43■□□□□ 0.22
GARNL3-208ENST00000444677 TBC1D8O95759 1140 aa16.43■□□□□ 0.22
GARNL3-208ENST00000444677 ZBTB48P10074 688 aaPredicted RBP16.43■□□□□ 0.22
GARNL3-208ENST00000444677 MAP3K10Q02779 954 aa16.43■□□□□ 0.22
GARNL3-208ENST00000444677 PTPN18Q99952 460 aa16.43■□□□□ 0.22
GARNL3-208ENST00000444677 RIOK1Q9BRS2 568 aaKnown RBP16.43■□□□□ 0.22
GARNL3-208ENST00000444677 SAP30BPQ9UHR5 308 aaKnown RBP16.43■□□□□ 0.22
GARNL3-208ENST00000444677 LAMB1P07942 1786 aa16.43■□□□□ 0.22
GARNL3-208ENST00000444677 MANSC4A6NHS7 340 aaPredicted RBP16.42■□□□□ 0.22
GARNL3-208ENST00000444677 SPDYE5A6NIY4 337 aa16.42■□□□□ 0.22
GARNL3-208ENST00000444677 IGF2BP3O00425 579 aaKnown RBP eCLIP16.42■□□□□ 0.22
GARNL3-208ENST00000444677 CA12O43570 354 aa16.42■□□□□ 0.22
GARNL3-208ENST00000444677 PLCG2P16885 1265 aa16.42■□□□□ 0.22
GARNL3-208ENST00000444677 RRP1BQ14684 758 aaKnown RBP16.42■□□□□ 0.22
GARNL3-208ENST00000444677 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
GARNL3-208ENST00000444677 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
GARNL3-208ENST00000444677 MS4A4AQ96JQ5 239 aa16.42■□□□□ 0.22
GARNL3-208ENST00000444677 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.42■□□□□ 0.22
GARNL3-208ENST00000444677 PALD1Q9ULE6 856 aa16.42■□□□□ 0.22
GARNL3-208ENST00000444677 FLT1P17948 1338 aa16.42■□□□□ 0.22
GARNL3-208ENST00000444677 ADD2P35612 726 aa16.41■□□□□ 0.22
GARNL3-208ENST00000444677 SREBF2Q12772 1141 aa16.41■□□□□ 0.22
GARNL3-208ENST00000444677 CCDC84Q86UT8 332 aaPredicted RBP16.41■□□□□ 0.22
GARNL3-208ENST00000444677 ERO1BQ86YB8 467 aa16.41■□□□□ 0.22
GARNL3-208ENST00000444677 BRI3BPQ8WY22 251 aa16.41■□□□□ 0.22
GARNL3-208ENST00000444677 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.41■□□□□ 0.22
GARNL3-208ENST00000444677 SAGE1Q9NXZ1 904 aa16.41■□□□□ 0.22
GARNL3-208ENST00000444677 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
GARNL3-208ENST00000444677 IRF6O14896 467 aa16.4■□□□□ 0.22
GARNL3-208ENST00000444677 AAMPQ13685 434 aa16.4■□□□□ 0.22
GARNL3-208ENST00000444677 NOL9Q5SY16 702 aaKnown RBP16.4■□□□□ 0.22
GARNL3-208ENST00000444677 B4GALNT3Q6L9W6 998 aa16.4■□□□□ 0.22
GARNL3-208ENST00000444677 IFNL1Q8IU54 200 aa16.4■□□□□ 0.22
GARNL3-208ENST00000444677 LCORLQ8N3X6 602 aa16.4■□□□□ 0.22
GARNL3-208ENST00000444677 PI4K2BQ8TCG2 481 aa16.4■□□□□ 0.22
GARNL3-208ENST00000444677 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
GARNL3-208ENST00000444677 RWDD1Q9H446 243 aaPredicted RBP16.4■□□□□ 0.22
GARNL3-208ENST00000444677 ARMT1Q9H993 441 aa16.4■□□□□ 0.22
GARNL3-208ENST00000444677 CCL15-CCL14A0A0B4J2E2 113 aa16.39■□□□□ 0.21
GARNL3-208ENST00000444677 TESPA1A2RU30 521 aaPredicted RBP16.39■□□□□ 0.21
GARNL3-208ENST00000444677 PRKAB2O43741 272 aa16.39■□□□□ 0.21
GARNL3-208ENST00000444677 TBC1D12O60347 775 aa16.39■□□□□ 0.21
GARNL3-208ENST00000444677 USP5P45974 858 aa16.39■□□□□ 0.21
GARNL3-208ENST00000444677 EVX2Q03828 476 aa16.39■□□□□ 0.21
GARNL3-208ENST00000444677 CCL15Q16663 113 aa16.39■□□□□ 0.21
GARNL3-208ENST00000444677 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
GARNL3-208ENST00000444677 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
GARNL3-208ENST00000444677 MYH2Q9UKX2 1941 aa16.39■□□□□ 0.21
GARNL3-208ENST00000444677 INHBEP58166 350 aa16.38■□□□□ 0.21
GARNL3-208ENST00000444677 JAG1P78504 1218 aa16.38■□□□□ 0.21
GARNL3-208ENST00000444677 PPIL2Q13356 520 aa16.38■□□□□ 0.21
GARNL3-208ENST00000444677 SMC5Q8IY18 1101 aa16.38■□□□□ 0.21
GARNL3-208ENST00000444677 SCYL3Q8IZE3 742 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms