RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 ZFYVE28Q9HCC9 887 aa13.46□□□□□ -0.25
SHC1-208ENST00000444179 KCNH4Q9UQ05 1017 aa13.46□□□□□ -0.25
SHC1-208ENST00000444179 MYH13Q9UKX3 1938 aa13.46□□□□□ -0.25
SHC1-208ENST00000444179 TLR2O60603 784 aa13.45□□□□□ -0.26
SHC1-208ENST00000444179 CTGFP29279 349 aa13.45□□□□□ -0.26
SHC1-208ENST00000444179 PICALMQ13492 652 aa13.45□□□□□ -0.26
SHC1-208ENST00000444179 SPTY2D1Q68D10 685 aaPredicted RBP13.45□□□□□ -0.26
SHC1-208ENST00000444179 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
SHC1-208ENST00000444179 DBNDD2Q9BQY9 259 aa13.45□□□□□ -0.26
SHC1-208ENST00000444179 SNRKQ9NRH2 765 aa13.45□□□□□ -0.26
SHC1-208ENST00000444179 POTEFA5A3E0 1075 aa13.44□□□□□ -0.26
SHC1-208ENST00000444179 TNNI3KQ59H18 835 aa13.44□□□□□ -0.26
SHC1-208ENST00000444179 GORABQ5T7V8 394 aa13.44□□□□□ -0.26
SHC1-208ENST00000444179 GPAT2Q6NUI2 795 aa13.44□□□□□ -0.26
SHC1-208ENST00000444179 ZCCHC17Q9NP64 241 aaKnown RBP13.44□□□□□ -0.26
SHC1-208ENST00000444179 GPR108Q9NPR9 543 aa13.44□□□□□ -0.26
SHC1-208ENST00000444179 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.44□□□□□ -0.26
SHC1-208ENST00000444179 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
SHC1-208ENST00000444179 FPGT-TNNI3KV9GXZ4 949 aa13.44□□□□□ -0.26
SHC1-208ENST00000444179 ZBED9Q6R2W3 1325 aa13.43□□□□□ -0.26
SHC1-208ENST00000444179 ADGRA2Q96PE1 1338 aa13.43□□□□□ -0.26
SHC1-208ENST00000444179 PDHXO00330 501 aa13.43□□□□□ -0.26
SHC1-208ENST00000444179 SURF6O75683 361 aaKnown RBP13.43□□□□□ -0.26
SHC1-208ENST00000444179 C17orf99Q6UX52 265 aa13.43□□□□□ -0.26
SHC1-208ENST00000444179 ANKRD23Q86SG2 305 aa13.43□□□□□ -0.26
SHC1-208ENST00000444179 ITPRIPQ8IWB1 547 aa13.43□□□□□ -0.26
SHC1-208ENST00000444179 SLF2Q8IX21 1173 aa13.43□□□□□ -0.26
SHC1-208ENST00000444179 PANK1Q8TE04 598 aa13.43□□□□□ -0.26
SHC1-208ENST00000444179 ARMC5Q96C12 935 aa13.43□□□□□ -0.26
SHC1-208ENST00000444179 TLR7Q9NYK1 1049 aaKnown RBP13.43□□□□□ -0.26
SHC1-208ENST00000444179 FAM196BA6NMK8 535 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 CYP2E1P05181 493 aaPredicted RBP13.42□□□□□ -0.26
SHC1-208ENST00000444179 UQCRFS1P1P0C7P4 283 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 PTPRAP18433 802 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 LACTBP83111 547 aaPredicted RBP13.42□□□□□ -0.26
SHC1-208ENST00000444179 RRP1BQ14684 758 aaKnown RBP13.42□□□□□ -0.26
SHC1-208ENST00000444179 ADGRA1Q86SQ6 560 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 CCDC84Q86UT8 332 aaPredicted RBP13.42□□□□□ -0.26
SHC1-208ENST00000444179 ZSCAN29Q8IWY8 852 aaPredicted RBP13.42□□□□□ -0.26
SHC1-208ENST00000444179 FTSJ3Q8IY81 847 aaKnown RBP13.42□□□□□ -0.26
SHC1-208ENST00000444179 SCYL3Q8IZE3 742 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 RAI14Q9P0K7 980 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 CPA4Q9UI42 421 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 DBNLQ9UJU6 430 aaKnown RBP13.42□□□□□ -0.26
SHC1-208ENST00000444179 AFG3L2Q9Y4W6 797 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 PTCH2Q9Y6C5 1203 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 ZHX2Q9Y6X8 837 aa13.42□□□□□ -0.26
SHC1-208ENST00000444179 CXCL11O14625 94 aa13.41□□□□□ -0.26
SHC1-208ENST00000444179 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
SHC1-208ENST00000444179 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
SHC1-208ENST00000444179 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
SHC1-208ENST00000444179 SH3RF3Q8TEJ3 882 aaPredicted RBP13.41□□□□□ -0.26
SHC1-208ENST00000444179 EAF2Q96CJ1 260 aaPredicted RBP13.41□□□□□ -0.26
SHC1-208ENST00000444179 PIH1D3Q9NQM4 214 aaKnown RBP13.41□□□□□ -0.26
SHC1-208ENST00000444179 MYH2Q9UKX2 1941 aa13.41□□□□□ -0.26
SHC1-208ENST00000444179 A0A0G2JLL6 359 aaPredicted RBP13.4□□□□□ -0.26
SHC1-208ENST00000444179 TBC1D12O60347 775 aa13.4□□□□□ -0.26
SHC1-208ENST00000444179 CYP2C8P10632 490 aa13.4□□□□□ -0.26
SHC1-208ENST00000444179 ZAP70P43403 619 aa13.4□□□□□ -0.26
SHC1-208ENST00000444179 GSTO1P78417 241 aa13.4□□□□□ -0.26
SHC1-208ENST00000444179 OS9Q13438 667 aaPredicted RBP13.4□□□□□ -0.26
SHC1-208ENST00000444179 PRRT2Q7Z6L0 340 aaPredicted RBP13.4□□□□□ -0.26
SHC1-208ENST00000444179 ZNF333Q96JL9 665 aa13.4□□□□□ -0.26
SHC1-208ENST00000444179 ZNF512BQ96KM6 892 aaPredicted RBP13.4□□□□□ -0.26
SHC1-208ENST00000444179 TRIM47Q96LD4 638 aa13.4□□□□□ -0.26
SHC1-208ENST00000444179 CCDC8Q9H0W5 538 aaPredicted RBP13.4□□□□□ -0.26
SHC1-208ENST00000444179 LRP2BPQ9P2M1 347 aa13.4□□□□□ -0.26
SHC1-208ENST00000444179 ZSWIM8A7E2V4 1837 aa13.4□□□□□ -0.26
SHC1-208ENST00000444179 PDE4DIPQ5VU43 2346 aa13.39□□□□□ -0.27
SHC1-208ENST00000444179 CTNND1O60716 968 aaKnown RBP13.39□□□□□ -0.27
SHC1-208ENST00000444179 LDHCP07864 332 aa13.39□□□□□ -0.27
SHC1-208ENST00000444179 EN2P19622 333 aaPredicted RBP13.39□□□□□ -0.27
SHC1-208ENST00000444179 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
SHC1-208ENST00000444179 TEX11Q8IYF3 940 aa13.39□□□□□ -0.27
SHC1-208ENST00000444179 OSBPL5Q9H0X9 879 aaPredicted RBP13.39□□□□□ -0.27
SHC1-208ENST00000444179 PICK1Q9NRD5 415 aa13.39□□□□□ -0.27
SHC1-208ENST00000444179 NDUFB9Q9Y6M9 179 aa13.39□□□□□ -0.27
SHC1-208ENST00000444179 MAP4K4O95819 1239 aaPredicted RBP13.38□□□□□ -0.27
SHC1-208ENST00000444179 BCRP11274 1271 aa13.38□□□□□ -0.27
SHC1-208ENST00000444179 PPP4CP60510 307 aa13.38□□□□□ -0.27
SHC1-208ENST00000444179 JAG1P78504 1218 aa13.38□□□□□ -0.27
SHC1-208ENST00000444179 CCDC158Q5M9N0 1113 aa13.38□□□□□ -0.27
SHC1-208ENST00000444179 SH3TC2Q8TF17 1288 aa13.38□□□□□ -0.27
SHC1-208ENST00000444179 AATFQ9NY61 560 aaKnown RBP eCLIP13.38□□□□□ -0.27
SHC1-208ENST00000444179 EXOC6BQ9Y2D4 811 aa13.38□□□□□ -0.27
SHC1-208ENST00000444179 COL2A1P02458 1487 aaPredicted RBP13.37□□□□□ -0.27
SHC1-208ENST00000444179 DOCK2Q92608 1830 aa13.37□□□□□ -0.27
SHC1-208ENST00000444179 TRIM75PA6NK02 468 aa13.37□□□□□ -0.27
SHC1-208ENST00000444179 PSMC4P43686 418 aa13.37□□□□□ -0.27
SHC1-208ENST00000444179 DYNLL1P63167 89 aaKnown RBP13.37□□□□□ -0.27
SHC1-208ENST00000444179 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
SHC1-208ENST00000444179 SIRT2Q8IXJ6 389 aa13.37□□□□□ -0.27
SHC1-208ENST00000444179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHC1-208ENST00000444179 MYCP01106 439 aaPredicted RBP13.36□□□□□ -0.27
SHC1-208ENST00000444179 OSBPP22059 807 aa13.36□□□□□ -0.27
SHC1-208ENST00000444179 ARHGEF6Q15052 776 aa13.36□□□□□ -0.27
SHC1-208ENST00000444179 SHROOM1Q2M3G4 852 aaPredicted RBP13.36□□□□□ -0.27
SHC1-208ENST00000444179 SLC9C1Q4G0N8 1177 aa13.36□□□□□ -0.27
SHC1-208ENST00000444179 TREML2Q5T2D2 321 aa13.36□□□□□ -0.27
SHC1-208ENST00000444179 GADL1Q6ZQY3 521 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms