RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 BTDP43251 543 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 MECOMQ03112 1051 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 PKN2Q16513 984 aaKnown RBP10.74□□□□□ -0.69
USP6NL-203ENST00000443016 CCL15Q16663 113 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 TNNI3KQ59H18 835 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 NOM1Q5C9Z4 860 aaKnown RBP10.74□□□□□ -0.69
USP6NL-203ENST00000443016 ERO1BQ86YB8 467 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 CFHR5Q9BXR6 569 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 FPGT-TNNI3KV9GXZ4 949 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 RPAP1Q9BWH6 1393 aaPredicted RBP10.73□□□□□ -0.69
USP6NL-203ENST00000443016 SPDYE5A6NIY4 337 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 RGS3P49796 1198 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 GSTO1P78417 241 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 PICALMQ13492 652 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 FAM198AQ9UFP1 575 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 HTTP42858 3142 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 LDHCP07864 332 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 ARID4AP29374 1257 aaPredicted RBP10.73□□□□□ -0.69
USP6NL-203ENST00000443016 CRHR2Q13324 411 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 PTPN18Q99952 460 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 GPR108Q9NPR9 543 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 SNRKQ9NRH2 765 aa10.73□□□□□ -0.69
USP6NL-203ENST00000443016 MROH7-TTC4A0A0A0MT08 1334 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 GAKO14976 1311 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 AK9Q5TCS8 1911 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 IRF6O14896 467 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 INPP5BP32019 993 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 MCAMP43121 646 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 FAM163AQ96GL9 167 aaPredicted RBP10.72□□□□□ -0.69
USP6NL-203ENST00000443016 MS4A4AQ96JQ5 239 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 DBNDD2Q9BQY9 259 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 NOL10Q9BSC4 688 aaKnown RBP10.72□□□□□ -0.69
USP6NL-203ENST00000443016 BCL11AQ9H165 835 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 SNCAIPQ9Y6H5 919 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 ENTPD3O75355 529 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 CETPP11597 493 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 SNAPC2Q13487 334 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 TAF1CQ15572 869 aaPredicted RBP10.72□□□□□ -0.69
USP6NL-203ENST00000443016 CEP85Q6P2H3 762 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 ZFPM1Q8IX07 1006 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 BRI3BPQ8WY22 251 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 IDI2Q9BXS1 227 aa10.72□□□□□ -0.69
USP6NL-203ENST00000443016 TESPA1A2RU30 521 aaPredicted RBP10.71□□□□□ -0.69
USP6NL-203ENST00000443016 NSUN4Q96CB9 384 aaKnown RBP10.71□□□□□ -0.69
USP6NL-203ENST00000443016 CCDC8Q9H0W5 538 aaPredicted RBP10.71□□□□□ -0.69
USP6NL-203ENST00000443016 ZFYVE28Q9HCC9 887 aa10.71□□□□□ -0.69
USP6NL-203ENST00000443016 EXOC6BQ9Y2D4 811 aa10.71□□□□□ -0.69
USP6NL-203ENST00000443016 NOP58Q9Y2X3 529 aaKnown RBP10.71□□□□□ -0.69
USP6NL-203ENST00000443016 TRIM17Q9Y577 477 aa10.71□□□□□ -0.69
USP6NL-203ENST00000443016 BRCA2P51587 3418 aa10.71□□□□□ -0.7
USP6NL-203ENST00000443016 GPR75-ASB3A0A0A6YYF3 556 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 MLLT1Q03111 559 aaPredicted RBP10.7□□□□□ -0.7
USP6NL-203ENST00000443016 PPATQ06203 517 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 PPIL2Q13356 520 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 DDX19BQ9UMR2 479 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 HPS5Q9UPZ3 1129 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 COG6Q9Y2V7 657 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 SP3Q02447 781 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 FBXO46Q6PJ61 603 aaPredicted RBP10.7□□□□□ -0.7
USP6NL-203ENST00000443016 ERC1Q8IUD2 1116 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 FAM43AQ8N2R8 423 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 SPOCK2Q92563 424 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 ERO1AQ96HE7 468 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 CHMP4BQ9H444 224 aaKnown RBP10.7□□□□□ -0.7
USP6NL-203ENST00000443016 PICK1Q9NRD5 415 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 OTOFQ9HC10 1997 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 MYH2Q9UKX2 1941 aa10.7□□□□□ -0.7
USP6NL-203ENST00000443016 PDE3AQ14432 1141 aa10.69□□□□□ -0.7
USP6NL-203ENST00000443016 HSP90AB4PQ58FF6 505 aa10.69□□□□□ -0.7
USP6NL-203ENST00000443016 NAA16Q6N069 864 aaPredicted RBP10.69□□□□□ -0.7
USP6NL-203ENST00000443016 UBE2Q2Q8WVN8 375 aa10.69□□□□□ -0.7
USP6NL-203ENST00000443016 DBNLQ9UJU6 430 aaKnown RBP10.69□□□□□ -0.7
USP6NL-203ENST00000443016 DDTLA6NHG4 134 aaPredicted RBP10.69□□□□□ -0.7
USP6NL-203ENST00000443016 HMMRO75330 724 aa10.69□□□□□ -0.7
USP6NL-203ENST00000443016 BAG3O95817 575 aa10.69□□□□□ -0.7
USP6NL-203ENST00000443016 SOX10P56693 466 aa10.69□□□□□ -0.7
USP6NL-203ENST00000443016 ZNF384Q8TF68 577 aa10.69□□□□□ -0.7
USP6NL-203ENST00000443016 EAF2Q96CJ1 260 aaPredicted RBP10.69□□□□□ -0.7
USP6NL-203ENST00000443016 DDX4Q9NQI0 724 aaKnown RBP10.69□□□□□ -0.7
USP6NL-203ENST00000443016 RHBDL3P58872 404 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 ARHGEF6Q15052 776 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 AACSQ86V21 672 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 TEX11Q8IYF3 940 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 CD99L2Q8TCZ2 262 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 EFCC1Q9HA90 598 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 AATFQ9NY61 560 aaKnown RBP eCLIP10.68□□□□□ -0.7
USP6NL-203ENST00000443016 TLR7Q9NYK1 1049 aaKnown RBP10.68□□□□□ -0.7
USP6NL-203ENST00000443016 ZNF112Q9UJU3 913 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 MKI67P46013 3256 aaKnown RBP10.68□□□□□ -0.7
USP6NL-203ENST00000443016 BTBD19C9JJ37 291 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 CYP2E1P05181 493 aaPredicted RBP10.68□□□□□ -0.7
USP6NL-203ENST00000443016 ZAP70P43403 619 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 RPAP2Q8IXW5 612 aaPredicted RBP10.68□□□□□ -0.7
USP6NL-203ENST00000443016 CCDC82Q8N4S0 544 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 IL1RAPL2Q9NP60 686 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 ZHX2Q9Y6X8 837 aa10.68□□□□□ -0.7
USP6NL-203ENST00000443016 IDH1O75874 414 aaKnown RBP10.67□□□□□ -0.7
USP6NL-203ENST00000443016 MAP4K4O95819 1239 aaPredicted RBP10.67□□□□□ -0.7
USP6NL-203ENST00000443016 PLCG2P16885 1265 aa10.67□□□□□ -0.7
USP6NL-203ENST00000443016 SH3BP5LQ7L8J4 393 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms