RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 SLC4A4Q9Y6R1 1079 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 PXDNLA1KZ92 1463 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 ZBTB43O43298 467 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 SASH3O75995 380 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 PPP2R3AQ06190 1150 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 SDR42E1Q8WUS8 393 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 CAPZA3Q96KX2 299 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 DSCC1Q9BVC3 393 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 FEZ2Q9UHY8 353 aaPredicted RBP11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 RASSF8Q8NHQ8 419 aa11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 RASSF4Q9H2L5 321 aa11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 WTIPA6NIX2 430 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 ERVV-2B6SEH9 535 aa11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 ZNF202O95125 648 aa11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 ERCC3P19447 782 aa11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 AFMP43652 599 aa11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 ETF1P62495 437 aaKnown RBP11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 AXDND1Q5T1B0 1012 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 DHX58Q96C10 678 aa11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 ATG3Q9NT62 314 aa11.38□□□□□ -0.59
CDC42SE1-202ENST00000439374 CASP7P55210 303 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 IRX3P78415 501 aaPredicted RBP11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 MAP3K12Q12852 859 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 SAFBQ15424 915 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 TTLL11Q8NHH1 800 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 MAPK8IP1Q9UQF2 711 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 CYP7A1P22680 504 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 MATR3P43243 847 aaKnown RBP eCLIP11.37□□□□□ -0.594e-6■■□□□ 11.7
CDC42SE1-202ENST00000439374 GTF2A1P52655 376 aaPredicted RBP11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 OLFM4Q6UX06 510 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 TOGARAM2Q6ZUX3 1019 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 NYAP1Q6ZVC0 841 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 LRP10Q7Z4F1 713 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 NBPF11Q86T75 865 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 NLRP10Q86W26 655 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 CYP2D7A0A087X1C5 515 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 MYO1CO00159 1063 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 IGHMBP2P38935 993 aaKnown RBP11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 HSP90B2PQ58FF3 399 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 ZBTB38Q8NAP3 1195 aaPredicted RBP11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 UBAC1Q9BSL1 405 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 PARD6BQ9BYG5 372 aa11.37□□□□□ -0.59
CDC42SE1-202ENST00000439374 CARMIL3Q8ND23 1372 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 FDPSP14324 419 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 PDE6AP16499 860 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 SYKP43405 635 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 CTSWP56202 376 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 GSDMDP57764 484 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 CYB5R4Q7L1T6 521 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 SMYD4Q8IYR2 804 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 MRFAP1L1Q96HT8 127 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 RGPD2P0DJD1 1756 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 KIF28PB7ZC32 967 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 PDE6BP35913 854 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 GYG1P46976 350 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 KRT40Q6A162 431 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 MFSD6Q6ZSS7 791 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 AK7Q96M32 723 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 PSMB7Q99436 277 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 FAM107BQ9H098 131 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 FAN1Q9Y2M0 1017 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 SMIM22K7EJ46 135 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 SLC5A1P13866 664 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 CYP2C19P33261 490 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 ZNF569Q5MCW4 686 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 MYSM1Q5VVJ2 828 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 JAKMIP3Q5VZ66 844 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 USPL1Q5W0Q7 1092 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 GSPT2Q8IYD1 628 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 CNNM3Q8NE01 707 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 KIAA1468Q9P260 1216 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 TFR2Q9UP52 801 aa11.36□□□□□ -0.59
CDC42SE1-202ENST00000439374 PATL2C9JE40 543 aaKnown RBP11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 RAD21O60216 631 aa11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 CCT6AP40227 531 aaKnown RBP11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 GIGYF2Q6Y7W6 1299 aaKnown RBP11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 GOLGA6L1Q8N7Z2 621 aa11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 RIN2Q8WYP3 895 aaPredicted RBP11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 ANGEL1Q9UNK9 670 aaKnown RBP11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 BTBD18B2RXH4 712 aa11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 WDHD1O75717 1129 aaPredicted RBP11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 ZFYP08048 801 aaPredicted RBP11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 PFKFB1P16118 471 aa11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 ANO1Q5XXA6 986 aa11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 KCNB2Q92953 911 aa11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 TFCP2L1Q9NZI6 479 aa11.35□□□□□ -0.59
CDC42SE1-202ENST00000439374 PCCAP05165 728 aaPredicted RBP11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 EXOSC10Q01780 885 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 TRIM22Q8IYM9 498 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 FBXO18Q8NFZ0 1043 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 NACAP1Q9BZK3 213 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 SH3TC1Q8TE82 1336 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 SOWAHDA6NJG2 315 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms