RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 SIL1Q9H173 461 aa10.16□□□□□ -0.78
AC012494.1-201ENST00000439259 CCER2I3L3R5 266 aa10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 MYO1BO43795 1136 aa10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 FRAT2O75474 233 aaPredicted RBP10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 CRKP46108 304 aa10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 RASA3Q14644 834 aa10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 ATG9AQ7Z3C6 839 aa10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 DZIP1LQ8IYY4 767 aaKnown RBP10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 R3HDMLQ9H3Y0 253 aa10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 ZNF70Q9UC06 446 aaPredicted RBP10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 TNNQ9UQP3 1299 aa10.15□□□□□ -0.78
AC012494.1-201ENST00000439259 TCP10L2B9ZVM9 353 aa10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 EYA2O00167 538 aa10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 USP2O75604 605 aaPredicted RBP10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 UBTFL1P0CB47 393 aaPredicted RBP10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 FGFR2P21802 821 aa10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 TM4SF4P48230 202 aa10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 RARSP54136 660 aaKnown RBP10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 CACNB3P54284 484 aa10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 CAVIN4Q5BKX8 364 aa10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 SPRYD7Q5W111 196 aa10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 MEIS3Q99687 375 aa10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 SERPINA10Q9UK55 444 aa10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 PA2G4Q9UQ80 394 aaKnown RBP10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 LRRFIP2Q9Y608 721 aaKnown RBP10.14□□□□□ -0.79
AC012494.1-201ENST00000439259 COL1A1P02452 1464 aaPredicted RBP10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 PPP1R12BO60237 982 aaPredicted RBP10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 OSBPP22059 807 aa10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 GJA5P36382 358 aa10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 PUM3Q15397 648 aaKnown RBP10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 MAP3K11Q16584 847 aa10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 SLC10A4Q96EP9 437 aa10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 TMEM39BQ9GZU3 492 aa10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 PPP2R3BQ9Y5P8 575 aa10.13□□□□□ -0.79
AC012494.1-201ENST00000439259 AKAP11Q9UKA4 1901 aa10.12□□□□□ -0.79
AC012494.1-201ENST00000439259 IFIT1P09914 478 aaKnown RBP10.12□□□□□ -0.79
AC012494.1-201ENST00000439259 CT47B1P0C2W7 299 aaPredicted RBP10.12□□□□□ -0.79
AC012494.1-201ENST00000439259 SUPT20HL1Q3ZLR7 823 aa10.12□□□□□ -0.79
AC012494.1-201ENST00000439259 ZNF296Q8WUU4 475 aaPredicted RBP10.12□□□□□ -0.79
AC012494.1-201ENST00000439259 WNK4Q96J92 1243 aa10.12□□□□□ -0.79
AC012494.1-201ENST00000439259 TEPSINQ96N21 525 aa10.12□□□□□ -0.79
AC012494.1-201ENST00000439259 API5Q9BZZ5 524 aaKnown RBP10.12□□□□□ -0.79
AC012494.1-201ENST00000439259 BCAR3O75815 825 aa10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 SLC5A1P13866 664 aa10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 KCNC4Q03721 635 aa10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 SREBF2Q12772 1141 aa10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 APOBEC3HQ6NTF7 200 aaKnown RBP10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 CTU1Q7Z7A3 348 aaKnown RBP10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 TBC1D22AQ8WUA7 517 aa10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 LPIN2Q92539 896 aa10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 TEKT1Q969V4 418 aa10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 ELP3Q9H9T3 547 aa10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 ECM29Q5VYK3 1845 aa10.11□□□□□ -0.79
AC012494.1-201ENST00000439259 GPR25O00155 361 aa10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 IGF2BP3O00425 579 aaKnown RBP eCLIP10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 ADORA1P30542 326 aa10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 PHKA1P46020 1223 aa10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 IREB2P48200 963 aaKnown RBP10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 TNFAIP1Q13829 316 aa10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 ATP2B3Q16720 1220 aa10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 FRAT1Q92837 279 aaPredicted RBP10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 CLUAP1Q96AJ1 413 aa10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 CEP126Q9P2H0 1117 aa10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 ARAP2Q8WZ64 1704 aa10.1□□□□□ -0.79
AC012494.1-201ENST00000439259 KIF16BQ96L93 1317 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 CIAO1O76071 339 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 TRIM27P14373 513 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 PRDX5P30044 214 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 SOX10P56693 466 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 PPP4CP60510 307 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 HDLBPQ00341 1268 aaKnown RBP10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 DIXDC1Q155Q3 683 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 INTS3Q68E01 1043 aaKnown RBP10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 ANKRD13AQ8IZ07 590 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 TATDN2Q93075 761 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 OPTNQ96CV9 577 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 ZDHHC15Q96MV8 337 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 PTPN18Q99952 460 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 PNMA3Q9UL41 463 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 TNRC18O15417 2968 aaPredicted RBP10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 HTTP42858 3142 aa10.09□□□□□ -0.79
AC012494.1-201ENST00000439259 MANSC4A6NHS7 340 aaPredicted RBP10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 ZBTB48P10074 688 aaPredicted RBP10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 IL15P40933 162 aaPredicted RBP10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 TNNI2P48788 182 aa10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 RGS19P49795 217 aa10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 TIMM10P62072 90 aa10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 MLLT1Q03111 559 aaPredicted RBP10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 VGLL4Q14135 290 aa10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 WDR66Q8TBY9 1149 aa10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 ARHGAP45Q92619 1136 aa10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 CDHR5Q9HBB8 845 aa10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 COPRSQ9NQ92 184 aa10.08□□□□□ -0.8
AC012494.1-201ENST00000439259 SRGAP3O43295 1099 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 FKTNO75072 461 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 HNRNPUQ00839 825 aaKnown RBP eCLIP10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 TCP10Q12799 353 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms